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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G319300.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G56690.1 TraesCS1A01G308700.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS1A01G308800.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS1B01G319300.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS1D01G308000.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS2B01G113800.2 AT3G56800.1 11346951
AT3G56690.1 TraesCS3A01G184500.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS3A01G191900.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS3A01G335000.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS3B01G219900.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS3B01G365900.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS3D01G188600.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS3D01G194500.2 AT3G56800.1 11346951
AT3G56690.1 TraesCS3D01G328300.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS4B01G131100.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS4D01G126100.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5A01G057100.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5A01G057200.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5A01G139700.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5B01G059900.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5B01G137100.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5D01G068000.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5D01G068100.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5D01G153400.1 AT3G56800.1 11346951
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G071300.1 Wheat cytosol, plastid 97.04 94.73
TraesCS1D01G073600.1 Wheat cytosol, plastid 97.04 94.73
HORVU1Hr1G015310.16 Barley cytosol, plastid 95.21 92.94
TraesCS4B01G108300.1 Wheat plastid 91.95 90.2
EES09632 Sorghum cytosol, plastid 72.38 71.86
Zm00001d049140_P006 Maize cytosol, plastid 72.17 70.45
GSMUA_Achr6P29120_001 Banana cytosol 38.74 63.33
PGSC0003DMT400018483 Potato cytosol 22.63 54.15
CDX72118 Canola plastid 43.83 45.55
VIT_08s0040g00910.t01 Wine grape cytosol 47.91 44.38
Solyc10g078320.1.1 Tomato nucleus 44.24 43.97
KRH66707 Soybean plastid 46.28 43.4
Bra007262.1-P Field mustard plastid 43.32 43.37
AT3G56690.1 Thale cress cytosol, plastid 45.06 43.25
CDY56774 Canola plastid 44.44 42.83
KRG95054 Soybean plastid 33.13 42.15
TraesCS2B01G373100.1 Wheat cytosol 23.85 41.12
TraesCS1B01G235400.1 Wheat cytosol 24.77 37.85
TraesCS3B01G171400.1 Wheat cytosol 25.18 33.98
TraesCS1B01G235300.1 Wheat cytosol 27.62 33.88
TraesCS1B01G192400.1 Wheat cytosol 27.73 33.66
TraesCS1B01G235500.1 Wheat cytosol 27.42 33.62
TraesCS4B01G268400.1 Wheat golgi 27.22 32.84
TraesCS3B01G154400.1 Wheat cytosol 26.3 32.74
TraesCS1B01G259200.1 Wheat cytosol 26.3 32.7
TraesCS1B01G419200.1 Wheat cytosol 26.3 32.7
TraesCS3B01G172100.1 Wheat cytosol 26.2 32.53
TraesCS4B01G268200.1 Wheat cytosol 27.01 32.44
TraesCS3B01G171200.1 Wheat cytosol 25.89 32.23
TraesCS3B01G172000.1 Wheat cytosol 25.69 32.14
TraesCS3B01G171300.1 Wheat cytosol 22.63 30.45
TraesCS5B01G323100.1 Wheat cytosol 17.94 30.29
TraesCS6B01G188500.1 Wheat cytosol 12.33 30.25
TraesCS7B01G280400.1 Wheat cytosol, unclear 12.13 29.75
TraesCS7B01G060900.1 Wheat golgi 12.84 29.58
TraesCS7B01G036400.1 Wheat cytosol 12.74 29.27
TraesCS7B01G468900.1 Wheat cytosol 11.82 29.15
TraesCS3B01G487900.1 Wheat mitochondrion 22.12 29.13
TraesCS6B01G376500.1 Wheat golgi 12.64 29.11
TraesCS3B01G457100.1 Wheat cytosol, golgi 12.64 28.57
TraesCS4B01G189200.1 Wheat cytosol 13.05 28.44
TraesCS2B01G105700.1 Wheat cytosol 12.84 28.06
TraesCS6B01G207100.1 Wheat cytosol 11.93 27.99
TraesCS7B01G254400.1 Wheat cytosol 11.93 27.66
TraesCS2B01G499600.1 Wheat cytosol 11.72 27.58
TraesCS2B01G100400.1 Wheat cytosol, plastid 11.62 27.47
TraesCS2B01G494200.1 Wheat cytosol 12.44 26.75
TraesCS2B01G493900.1 Wheat cytosol 12.33 26.71
TraesCS2B01G480000.3 Wheat mitochondrion 20.59 21.65
TraesCS5B01G299200.1 Wheat mitochondrion 20.18 18.1
TraesCS7B01G174800.1 Wheat cytosol 18.76 17.86
Protein Annotations
EnsemblPlants:TraesCS1B01G089700.1EnsemblPlantsGene:TraesCS1B01G089700Gene3D:1.10.8.60Gene3D:3.40.50.300GO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0005524InterPro:AAA+_ATPaseInterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreInterPro:P-loop_NTPase
PANTHER:PTHR23077PANTHER:PTHR23077:SF27PFAM:PF00004ScanProsite:PS00674SEG:segSMART:SM00382
SUPFAM:SSF52540TIGR:cd00009MapMan:35.1:::
Description
No Description!
Coordinates
chr1B:+:90418211..90424495
Molecular Weight (calculated)
106511.0 Da
IEP (calculated)
5.318
GRAVY (calculated)
-0.190
Length
981 amino acids
Sequence
(BLAST)
001: MSSKGKKKKP SASPQPSPRT PPSRAREDTG DCILDLSSTA AAAAARYPAL VPRGGVGCFA GTVSDVVSRG GSRGGEGRLW LAEPSMASTG LRPGCLVFVS
101: LISSSSNSLD GFPLDSLFEE CNRFFNLDVD NDLISNEAGV NFVTATVFPS REVQKNGIKL SWDLACTLGY PVVGRSLLIS PLYTSQAPKR ADSGEFLRVI
201: KCSDLYLSLV PTKVVPSSHN KSESDCLPVR NVMVMESPKR IPSTPPCRNE SHDGASNSGF SLCLDPATAK SALADDKIND LLQTSASRWL DGRHLLKGNY
301: VPLSMCGKVS MFVVLRAETD GSALDVVHEK RNSMSNADVS GKLVETPALF LVERTTKVHL SDLSSSKEFG SDKLGFPPEY SICADTGSED ANHDQRLGGL
401: SEVSAKVKEM ISFSLADQIG LPRNGLHDLP RYKGLLLYGP PGTGKTSLAS SCAYDLGANL FTINGPEIIS QYHGESEQTL YDVFTSAKQA APAMIFIDEL
501: DAIAPARKDG GEELSLRMVA TLLKLMDEIG RNDRVILIAA TNRLESIDRA LLRPGRFDQE IEIGVPSPGQ RLDILHHLLS GVHHSLTSEE VESLAFATHG
601: FVGADLAALC NEAALSALRR YISVKESSTQ LLGDRDTNAE KTNIQEIDGL LGYEISSLSS SLSKLTVSME DHCWTNRGDI IESSELDDKK DDLLLLVIKD
701: DFEQAKMKVR PSAMREVMLE LPKVRWEDVG GQARIKKQLI EAIQLPQKCP DAFERLGIRP PRGLLMIGPP GCSKTLMARA VASEAKMNFL AVKGPELFSK
801: WVGDSEKAVR SLFAKAKDNA PAILFFDEID GLAVTRGHGS NGISVADRVL SQLLQEMDGL DQKIGVTVIA ATNRPDKIDI ALLRPGRFDR LLDVQPPDEA
901: DREDIFRIHT RSIPCSHDVN LNELARLTEG YTGADIKLVC REAAVAALDE NFDIPEVAIV HFKSAIDRVN PSDMQFYQEL A
Best Arabidopsis Sequence Match ( AT2G03670.1 )
(BLAST)
001: MLETESSVCD NIAGNEKWRA EAEIGGNERA LQALRELIIF PFRYPLEART LGLKWPRGLL LYGPPGTGKT SLVRAVVQEC DAHLIVLSPH SVHRAHAGES
101: EKVLREAFAE ASSHAVSDKP SVIFIDEIDV LCPRRDARRE QDVRIASQLF TLMDSNKPSS SAPRVVVVAS TNRVDAIDPA LRRAGRFDAL VEVSTPNEED
201: RLKILQLYTK KVNLDPSVDL QAIAISCNGY VGADLEALCR EATISASKRS SDSLILTSQD FKIAKSVVGP SINRGITVEI PKVTWDDVGG LKDLKKKLQQ
301: AVEWPIKHSA AFVKMGISPM RGILLHGPPG CSKTTLAKAA ANAAQASFFS LSCAELFSMY VGEGEALLRN TFQRARLASP SIIFFDEADV VACKRGDESS
401: SNSSTVGERL LSTLLTEMDG LEEAKGILVL AATNRPYAID AALMRPGRFD LVLYVPPPDL EARFEILQVH TRNMTLGDDV DLRKIAEETD LFTGAELEGL
501: CRESGTVSLR ENIAATAVFN RHFQTAKSSL KPALTIEEVE TYSSFRKAAK RSDSKPIPIN KKKATSTVFG FSWQLGVLSL LLLATGNYYF NHTKHELLVA
601: SAT
Arabidopsis Description
CDC48BCell division control protein 48 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPR1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.