CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 4
plastid 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56690.1	EES01631	AT3G56800.1	11346951
AT3G56690.1	EES09201	AT3G56800.1	11346951
AT3G56690.1	EES16322	AT3G56800.1	11346951
AT3G56690.1	OQU78227	AT3G56800.1	11346951

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049140_P006	Maize	cytosol, plastid	91.19	89.65
TraesCS1B01G089700.1	Wheat	cytosol, plastid	71.86	72.38
HORVU1Hr1G015310.16	Barley	cytosol, plastid	72.47	71.24
TraesCS1D01G073600.1	Wheat	cytosol, plastid	72.17	70.95
TraesCS1A01G071300.1	Wheat	cytosol, plastid	72.17	70.95
TraesCS4A01G204700.1	Wheat	cytosol, plastid	72.17	70.87
TraesCS4B01G108300.1	Wheat	plastid	71.66	70.8
TraesCS4D01G105500.2	Wheat	cytosol, plastid	71.76	70.48
HORVU4Hr1G016200.10	Barley	cytosol, plastid	70.34	69.09
GSMUA_Achr6P29120_001	Banana	cytosol	39.17	64.5
PGSC0003DMT400018483	Potato	cytosol	23.18	55.85
CDX72118	Canola	plastid	45.34	47.46
Solyc10g078320.1.1	Tomato	nucleus	45.55	45.59
VIT_08s0040g00910.t01	Wine grape	cytosol	48.79	45.51
Bra007262.1-P	Field mustard	plastid	45.14	45.51
CDY56774	Canola	plastid	46.36	44.99
AT3G56690.1	Thale cress	cytosol, plastid	46.46	44.91
KRH66707	Soybean	plastid	47.06	44.46
KRG95054	Soybean	plastid	33.91	43.45
KXG26645	Sorghum	cytosol	21.86	38.03
EES14976	Sorghum	cytosol	27.83	34.72
EER94171	Sorghum	cytosol	27.43	33.46
EER92840	Sorghum	cytosol	27.33	33.33
KXG40206	Sorghum	cytosol	25.91	32.74
EER95525	Sorghum	cytosol	25.81	32.69
EER87717	Sorghum	cytosol	24.6	31.35
EES06471	Sorghum	cytosol	12.55	31.0
EER88627	Sorghum	cytosol	12.15	30.15
EES07646	Sorghum	cytosol	12.96	30.05
EES01223	Sorghum	cytosol	12.96	30.05
EES06492	Sorghum	cytosol	12.55	29.38
EER88603	Sorghum	cytosol	12.45	29.36
EER99961	Sorghum	cytosol	12.75	28.19
KXG31298	Sorghum	cytosol	11.94	27.57
EER87942	Sorghum	cytosol	11.94	27.44
EER91182	Sorghum	cytosol	11.34	26.67
KXG39890	Sorghum	cytosol	11.13	26.19
EES12865	Sorghum	mitochondrion	20.34	21.66
EES15200	Sorghum	cytosol	21.26	19.2

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:8060059	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	UniProt:C5Y1P3	ncoils:Coil	EnsemblPlants:EES09632	ProteinID:EES09632	ProteinID:EES09632.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0016020	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674
PANTHER:PTHR23077	PANTHER:PTHR23077:SF27	SMART:SM00382	EnsemblPlantsGene:SORBI_3005G098800	SUPFAM:SSF52540	UniParc:UPI0001A866D3
RefSeq:XP_002450644.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:16158317..16167547

Molecular Weight (calculated)

106539.0 Da

IEP (calculated)

6.171

GRAVY (calculated)

-0.205

Length

988 amino acids

Sequence
(BLAST)

001: MPPSKGKKKN PSASPRPSPR TPPSRSSAAA GSGTGDGERS VDLPSVAAAA AAQFPALVPR GGDGCFAGTV AEVAPRDGSR GGRLGRLWLS EAAMVGAGMR
101: PGCLVSVSLI WSSSDQLDAF PLVNLFEECS RFFDLDLDND LLYGEAGKNF VVATVLPSRE VRKNGIKLSW DLACVLGHPL VGRSLFISPL CTLQAPKRSD
201: DSHILRVMKC KDLYLSLVPP NVGSSNGIES ESDHHPERST MVMETPKKGP STPLHKKESH HFPSNSGCSM CLDPTTAISA LADEKVNDLL QTSAVRWLNG
301: RHLLKGNFVP LSVCGKLSLF VVMGAEPDSS SHDVLCEKGN TLSNAEDSTK STETPVLFLV DGTTKVHLSD SVCTKQLDLD KLGLPSELSE YGDKRNEDSN
401: NVPTLGGLSK ESATIKGIIS FSLADQIGLP RYKGILLYGP PGTGKTSLAS SCAYDAGVNL FTINGPEIIS HHYGESEQSL YDVFSSAKQA APAVIFIDEL
501: DAIAPSRKDG SEELSIRMVA TLLKLMDEIG PSDRVLLIAA TNRPDSIDPA LRRPGRLDKE IEIGVPSPGQ RMDILRRLLI GVHHSLSNEE IESIALATHG
601: FVGADLAALC NEAALSALRC YISVKENSTQ QLGHPGCSFD KCNSQDTEDP SSLSSSFSQL TMSSDDVACM KGSNIKSSES YDDTNEIPLL VTIKDFDKAK
701: TKVRPSAMRE VILELPKVCW EDVGGQFSVK EQLIEAIQLP QKCPEAFERL GIRPPRGLLM IGPPGCSKTL MARAAASEAK LNFLAVKGPE LFSKWVGDSE
801: KAVRSLFAKA RANAPAILFF DEIDGLAVTR GQGNDGTSVA DRVLSQLLVE MDGLDQRVGV TVIAATNRPD KIDSALLRPG RFDRVLDVQP PNEADRADIF
901: RIHIRSMPCS ADMNLNELAR LTEGYTGADI KLICREAAVA ALDESFDIRE VAMRHFKSAV SRTRPSDVKF FEELAKQFRR SLASLRKQ

Best Arabidopsis Sequence Match ( AT3G56690.1 )
(BLAST)

0001: MPSKKKQSRT PSRLSNSEPP ASPRTPASST TSRDTDSINE EELRRSIEEA SAAFPCLLGK SAIIARVADV ASESIRGSKI WLSETSMVAA SLSPGSTVSV
0101: SLASPESRFS RSFPLSSIKA EYGDDSESII ADEPGNYFVL TTVFSSSKVF KDAVRISLNL CYGLGCPVSG RTVFVYPVSG PSLSDQFNGN GRSRYDDVNH
0201: LSLLACKELC LELTPFRNML QAKNAFESSY EQNGNGNSTP KTPANLQKFS SPRPKSPVSP IIEDSVFSCK QRFSSESSID LREVLSNESS KKLLQICASS
0301: WLYPCSLLYG NFVSVPILSE ICIFCVKRAD KRPSDTSNRN HAFMINQETK VYLHHTLDLA SEIQGRTFVQ GLQFDEGENV GCEISKLGGL SKEYAILRDI
0401: IDSSSIKNSL SSLGLRPTKG VLIHGPPGTG KTSLARTFAR HSGVNFFSVN GPEIISQYLG ESEKALDEVF RSASNATPAV VFIDDLDAIA PARKEGGEEL
0501: SQRMVATLLN LMDGISRTDG VVVIAATNRP DSIEPALRRP GRLDREIEIG VPSSTQRSDI LHIILRGMRH SLSNIQVEQL AMATHGFVGA DLSALCCEAA
0601: FVCLRRHLDQ SSSSSNLPLE EAPIAESSSN MSDISSDSSD SASSCITISA TTSGAQRSFS LDETVSLVAD DIQNNGNSCS EQMLRKQGEH TLSVGFEDFE
0701: NAKTKIRPSA MREVILEVPK VNWEDVGGQN EVKNQLMEAV EWPQKHQDAF KRIGTRPPSG ILMFGPPGCS KTLMARAVAS EAKLNFLAVK GPELFSKWVG
0801: ESEKAVRSLF AKARANAPSI IFFDEIDSLA SIRGKENDGV SVSDRVMSQL LVELDGLHQR VGVTVIAATN RPDKIDSALL RPGRFDRLLY VGPPNETDRE
0901: AILKIHLRKI PCSSDICLKE LASITKGYTG ADISLICREA AIAALEESLE MEEISMRHLK AAISQIEPTE ILSYKALSEK FQRLVHTDPQ REEEVTQPGN
1001: KSRSLWTPLR SVAMFLRRHI AS

Arabidopsis Description

CIP111Calmodulin-interacting protein 111 [Source:UniProtKB/Swiss-Prot;Acc:Q9LET7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.