Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 6
- plastid 1
- nucleus 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr11P... | Banana | cytosol | 72.86 | 93.86 |
KXG39890 | Sorghum | cytosol | 86.9 | 86.9 |
CDX88666 | Canola | cytosol | 80.95 | 84.16 |
CDY43865 | Canola | cytosol | 80.95 | 84.16 |
CDY58566 | Canola | cytosol | 80.95 | 84.16 |
Bra002662.1-P | Field mustard | cytosol | 80.71 | 83.91 |
Bra020378.1-P | Field mustard | cytosol | 80.71 | 83.91 |
CDY02806 | Canola | cytosol | 80.71 | 83.91 |
CDY32714 | Canola | cytosol | 80.71 | 83.91 |
CDY32995 | Canola | cytosol, extracellular | 80.71 | 83.91 |
Solyc06g082660.2.1 | Tomato | cytosol, nucleus | 82.38 | 83.57 |
KRH30674 | Soybean | cytosol, nucleus | 82.14 | 83.54 |
Bra006775.1-P | Field mustard | cytosol | 77.62 | 83.38 |
Solyc06g082630.2.1 | Tomato | cytosol, plastid | 82.14 | 83.33 |
AT5G58290.1 | Thale cress | cytosol | 80.71 | 83.09 |
VIT_06s0004g08220.t01 | Wine grape | cytosol | 82.62 | 83.01 |
KRG98107 | Soybean | cytosol | 82.38 | 81.99 |
KRH30673 | Soybean | cytosol, nucleus | 81.67 | 81.09 |
EER99961 | Sorghum | cytosol | 45.24 | 42.51 |
EER88627 | Sorghum | cytosol | 36.67 | 38.69 |
EES06471 | Sorghum | cytosol | 36.67 | 38.5 |
EER88603 | Sorghum | cytosol | 38.33 | 38.42 |
EES06492 | Sorghum | cytosol | 38.33 | 38.15 |
EER87942 | Sorghum | cytosol | 37.62 | 36.74 |
KXG31298 | Sorghum | cytosol | 37.38 | 36.68 |
EES07646 | Sorghum | cytosol | 36.43 | 35.92 |
EES01223 | Sorghum | cytosol | 36.43 | 35.92 |
KXG26645 | Sorghum | cytosol | 29.05 | 21.48 |
KXG40206 | Sorghum | cytosol | 30.71 | 16.5 |
EER95525 | Sorghum | cytosol | 30.48 | 16.41 |
EES14976 | Sorghum | cytosol | 30.71 | 16.29 |
EER92840 | Sorghum | cytosol | 30.48 | 15.8 |
EER94171 | Sorghum | cytosol | 30.24 | 15.68 |
EER87717 | Sorghum | cytosol | 28.33 | 15.35 |
EES12865 | Sorghum | mitochondrion | 26.43 | 11.96 |
EES09632 | Sorghum | cytosol, plastid | 26.67 | 11.34 |
EES15200 | Sorghum | cytosol | 25.0 | 9.6 |
Protein Annotations
Gene3D:1.10.8.60 | MapMan:19.2.6.2.1.3 | Gene3D:2.40.50.140 | InterPro:26S_Psome_P45-like | Gene3D:3.40.50.300 | EntrezGene:8062221 |
InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | UniProt:C5WR90 | ncoils:Coil | EnsemblPlants:EER91182 |
ProteinID:EER91182 | ProteinID:EER91182.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0008540 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 |
GO:GO:0017025 | GO:GO:0019538 | GO:GO:0030163 | GO:GO:0030433 | GO:GO:0031595 | GO:GO:0031597 |
GO:GO:0036402 | GO:GO:0045899 | GO:GO:1901800 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 |
InterPro:PSMC4 | PANTHER:PTHR23073 | PANTHER:PTHR23073:SF8 | SMART:SM00382 | EnsemblPlantsGene:SORBI_3001G157800 | SUPFAM:SSF52540 |
unigene:Sbi.18646 | TIGRFAMs:TIGR01242 | UniParc:UPI0001A82120 | RefSeq:XP_002464184.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:+:12784396..12789912
Molecular Weight (calculated)
46670.9 Da
IEP (calculated)
6.454
GRAVY (calculated)
-0.297
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MSATAVAPTP PAAAFAVAAP PSYPAAFSAA AAPTEGHDGD FYCHYKSLRR HHEFLEIQED YVKDELRNLR REELRGAEEV KRCRATPLEI GQFMEMVDAD
101: HGIVAPTTTG GSFYVRVLST IGRELLKPSA SVALHRHSHA LVDVLPPEAD SSISLLGSSE KPNVTYSDIG GCDIQKQEIR EAVELPLTHH ELYKQIGIDP
201: PRGVLLYGPP GTGKTMLAKA VAHHTTAAFI RVVGSEFVQK YLGEGPRMVR DVFRLAKENA PAIIFIDEVD AIATARFDAQ TGADREVQRI LMELLNQMDG
301: FDQTVNVKVI MATNRADTLD PALLRPGRLD RKIEFPLPDR RQKRLVFQVC TAKMNLSDEV DLEDYVCRPD KISAADIAAI CQEAGMHAVR KNRYVILPKD
401: FEKGYRTNVK KPETDFDFYK
101: HGIVAPTTTG GSFYVRVLST IGRELLKPSA SVALHRHSHA LVDVLPPEAD SSISLLGSSE KPNVTYSDIG GCDIQKQEIR EAVELPLTHH ELYKQIGIDP
201: PRGVLLYGPP GTGKTMLAKA VAHHTTAAFI RVVGSEFVQK YLGEGPRMVR DVFRLAKENA PAIIFIDEVD AIATARFDAQ TGADREVQRI LMELLNQMDG
301: FDQTVNVKVI MATNRADTLD PALLRPGRLD RKIEFPLPDR RQKRLVFQVC TAKMNLSDEV DLEDYVCRPD KISAADIAAI CQEAGMHAVR KNRYVILPKD
401: FEKGYRTNVK KPETDFDFYK
001: MASAAVASMV LDPKASPALM DLSTADEEDL YGRLKSLERQ LEFTDIQEEY VKDEQKNLKR ELLRAQEEVK RIQSVPLVIG QFMEMVDQNN GIVGSTTGSN
101: YYVRILSTIN RELLKPSASV ALHRHSNALV DVLPPEADSS ISLLSQSEKP DVSYNDIGGC DIQKQEIREA VELPLTHHEL YKQIGIDPPR GVLLYGPPGT
201: GKTMLAKAVA NHTTAAFIRV VGSEFVQKYL GEGPRMVRDV FRLAKENAPA IIFIDEVDAI ATARFDAQTG ADREVQRILM ELLNQMDGFD QTVNVKVIMA
301: TNRADTLDPA LLRPGRLDRK IEFPLPDRRQ KRLVFQVCTS KMNLSDEVDL EDYVSRPDKI SAAEIAAICQ EAGMHAVRKN RYVILPKDFE KGYRANVKKP
401: DTDFEFYK
101: YYVRILSTIN RELLKPSASV ALHRHSNALV DVLPPEADSS ISLLSQSEKP DVSYNDIGGC DIQKQEIREA VELPLTHHEL YKQIGIDPPR GVLLYGPPGT
201: GKTMLAKAVA NHTTAAFIRV VGSEFVQKYL GEGPRMVRDV FRLAKENAPA IIFIDEVDAI ATARFDAQTG ADREVQRILM ELLNQMDGFD QTVNVKVIMA
301: TNRADTLDPA LLRPGRLDRK IEFPLPDRRQ KRLVFQVCTS KMNLSDEVDL EDYVSRPDKI SAAEIAAICQ EAGMHAVRKN RYVILPKDFE KGYRANVKKP
401: DTDFEFYK
Arabidopsis Description
RPT3RPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UAH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.