CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035913_P002	Maize	cytosol, mitochondrion	87.48	92.5
Zm00001d045566_P001	Maize	cytosol, mitochondrion	90.71	91.54
Os06t0109400-01	Rice	cytosol	79.1	79.61
TraesCS4A01G463300.1	Wheat	mitochondrion	75.74	74.78
TraesCS7D01G023600.1	Wheat	mitochondrion	75.23	74.27
TraesCS7A01G025800.1	Wheat	mitochondrion	75.23	74.27
TraesCS5D01G081900.1	Wheat	mitochondrion	69.68	72.68
TraesCS3B01G487900.1	Wheat	mitochondrion	67.35	70.07
HORVU7Hr1G002880.2	Barley	plastid	72.13	69.79
TraesCS3D01G443600.1	Wheat	mitochondrion	67.1	69.52
TraesCS3A01G450800.1	Wheat	mitochondrion	66.58	69.17
CDY25624	Canola	cytosol	21.16	65.34
GSMUA_Achr4P03560_001	Banana	mitochondrion	64.77	64.19
KRH44049	Soybean	nucleus	57.81	56.64
VIT_01s0010g02600.t01	Wine grape	cytosol	59.35	55.76
Solyc01g068330.2.1	Tomato	nucleus	57.81	54.57
PGSC0003DMT400046254	Potato	cytosol	57.81	54.5
CDX74308	Canola	mitochondrion	49.42	54.25
PGSC0003DMT400015455	Potato	mitochondrion	51.61	52.42
CDX91939	Canola	cytosol, mitochondrion	51.23	51.09
CDX84794	Canola	cytosol	48.13	50.2
Bra022833.1-P	Field mustard	cytosol	47.61	49.66
CDY23949	Canola	cytosol	45.81	48.97
AT3G01610.2	Thale cress	nucleus	52.0	48.55
Bra000999.1-P	Field mustard	cytosol, mitochondrion	52.13	48.5
CDY45794	Canola	nucleus	48.52	47.18
CDX89698	Canola	endoplasmic reticulum	41.29	46.04
KRH10420	Soybean	mitochondrion	27.48	43.03
KXG26645	Sorghum	cytosol	29.03	39.61
EES14976	Sorghum	cytosol	32.9	32.2
EER92840	Sorghum	cytosol	33.55	32.1
EER94171	Sorghum	cytosol	33.42	31.98
EER95525	Sorghum	cytosol	32.13	31.92
KXG40206	Sorghum	cytosol	32.0	31.71
EES06471	Sorghum	cytosol	15.61	30.25
EES07646	Sorghum	cytosol	16.52	30.05
EES01223	Sorghum	cytosol	16.52	30.05
EER88627	Sorghum	cytosol	15.23	29.65
EES06492	Sorghum	cytosol	16.13	29.62
EER88603	Sorghum	cytosol	15.87	29.36
KXG39890	Sorghum	cytosol	15.87	29.29
EER91182	Sorghum	cytosol	15.35	28.33
EER99961	Sorghum	cytosol	15.87	27.52
EER87942	Sorghum	cytosol	14.84	26.74
KXG31298	Sorghum	cytosol	14.71	26.64
EES09632	Sorghum	cytosol, plastid	31.35	24.6
EES12865	Sorghum	mitochondrion	25.42	21.23
EES15200	Sorghum	cytosol	22.45	15.9

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:8067906	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	UniProt:C5Z2P2	EnsemblPlants:EER87717	ProteinID:EER87717	ProteinID:EER87717.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674
PANTHER:PTHR23077	PANTHER:PTHR23077:SF55	SMART:SM00382	EnsemblPlantsGene:SORBI_3010G007100	SUPFAM:SSF52540	UniParc:UPI0001A89521
RefSeq:XP_002436350.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:568840..573374

Molecular Weight (calculated)

85022.9 Da

IEP (calculated)

7.401

GRAVY (calculated)

-0.446

Length

775 amino acids

Sequence
(BLAST)

001: MAKRPRHAGN GAGRSQMTSL EWKLHRHILN GGLARRGASA EDVANTLRIH HPDLGRHKQG PFLACVRRAL ASIPIPSPSS PSSSESSSDD EGSSASRRRR
101: RRHDAHATTS SSTSVSDAAA HSSPPAPTFD LTKSIIRSNY AAQTPKRNQQ LEIEVTAEKP RRLITADGGG GGDAKPEAAP AAAEGFGRGD KGPRFADLGG
201: LEAVIEELMM EVVVPLCHPE LPHRLGVRPV AGLLLHGPPG CGKTTLAHAI ANETGVPFYK ISAPEVVSGV SGASEENIRG LFQKAYRTAP SIVFIDEIDA
301: IASKRENLQR EMERRIVTQL MTCMDQFHQN IGSGSGNLDA ESSEKKPGYV IVIGATNRPD AVDQALRRPG RFDREISLGV PDENARKQIL KMLTQHLRLE
401: GEFDLFKIAR ATPGFVGADL KALVDKAGNL AMKRIIDERR VQYRREHDGN TNHDWWRQPW DESEVEGLHI TMDDFEEATK MVQPSLRREG FSSVPDVTWD
501: DVGGLDSLRK EFDRCIIRCI KHPEDYEVFG VNMQAGFLLF GPPGCGKTLI AKAVAHEAGA NFIHIKGPEL LNKYVGESES EVRKIFTRAR TNSPCILFFD
601: EVDALTTKRG KEGGWVVERL LNQLLIELDG ADQRQGVYVI GATNRIDVID DAVLRPGRFG KKHYVPLPGA DERVSILKAH ARSKPFSADV DLDALARRAE
701: CNNLTGADLA SLVNEAAMAA LEERLEFLEN GTSSMSSSCL IEISHFERAL SKIKPSVSEQ QIKHYEALSK RYSSN

Best Arabidopsis Sequence Match ( AT3G01610.2 )
(BLAST)

001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE DEIEKARTKS

Arabidopsis Description

CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.