Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022833.1-P | Field mustard | cytosol | 99.06 | 99.06 |
| CDY23949 | Canola | cytosol | 85.46 | 87.59 |
| CDY45794 | Canola | nucleus | 90.98 | 84.82 |
| CDY25624 | Canola | cytosol | 28.53 | 84.46 |
| CDX74308 | Canola | mitochondrion | 68.64 | 72.24 |
| CDX91939 | Canola | cytosol, mitochondrion | 74.43 | 71.17 |
| AT3G01610.2 | Thale cress | nucleus | 69.85 | 62.53 |
| CDX89698 | Canola | endoplasmic reticulum | 55.99 | 59.86 |
| Zm00001d009592_P001 | Maize | cytosol | 19.38 | 54.96 |
| Zm00001d035913_P002 | Maize | cytosol, mitochondrion | 48.45 | 49.11 |
| EER87717 | Sorghum | cytosol | 50.2 | 48.13 |
| VIT_01s0010g02600.t01 | Wine grape | cytosol | 53.43 | 48.12 |
| GSMUA_Achr4P03560_001 | Banana | mitochondrion | 50.61 | 48.08 |
| PGSC0003DMT400015455 | Potato | mitochondrion | 49.26 | 47.97 |
| Zm00001d045566_P001 | Maize | cytosol, mitochondrion | 49.53 | 47.92 |
| Os06t0109400-01 | Rice | cytosol | 49.13 | 47.4 |
| Solyc01g068330.2.1 | Tomato | nucleus | 52.36 | 47.38 |
| PGSC0003DMT400046254 | Potato | cytosol | 52.36 | 47.32 |
| Zm00001d022096_P002 | Maize | mitochondrion | 48.05 | 47.16 |
| TraesCS5D01G081900.1 | Wheat | mitochondrion | 46.7 | 46.7 |
| TraesCS4A01G463300.1 | Wheat | mitochondrion | 49.13 | 46.5 |
| TraesCS7D01G023600.1 | Wheat | mitochondrion | 48.99 | 46.37 |
| TraesCS7A01G025800.1 | Wheat | mitochondrion | 48.72 | 46.11 |
| TraesCS3D01G443600.1 | Wheat | mitochondrion | 45.36 | 45.05 |
| TraesCS3B01G487900.1 | Wheat | mitochondrion | 44.95 | 44.83 |
| TraesCS3A01G450800.1 | Wheat | mitochondrion | 44.95 | 44.77 |
| HORVU7Hr1G002880.2 | Barley | plastid | 46.3 | 42.95 |
| Zm00001d027244_P001 | Maize | cytosol | 21.13 | 42.9 |
| Zm00001d002717_P001 | Maize | mitochondrion | 23.15 | 42.16 |
| Zm00001d053999_P001 | Maize | cytosol | 21.8 | 39.42 |
| KRH10420 | Soybean | mitochondrion | 25.84 | 38.79 |
| CDY20370 | Canola | cytosol | 13.19 | 36.43 |
| CDY39032 | Canola | cytosol | 11.57 | 34.26 |
| CDY04161 | Canola | cytosol | 27.32 | 33.66 |
| CDY41581 | Canola | cytosol | 34.59 | 31.81 |
| CDY54618 | Canola | cytosol | 34.59 | 31.81 |
| CDX73996 | Canola | cytosol | 34.45 | 31.64 |
| CDY07941 | Canola | cytosol | 34.45 | 31.64 |
| CDY41316 | Canola | cytosol, extracellular | 34.45 | 31.6 |
| CDY22207 | Canola | cytosol | 34.45 | 31.6 |
| CDY11249 | Canola | cytosol | 33.92 | 31.58 |
| CDY13308 | Canola | cytosol | 34.19 | 31.36 |
| CDX80862 | Canola | cytosol, plastid | 33.78 | 31.03 |
| CDY22373 | Canola | cytosol | 16.42 | 30.58 |
| CDX71534 | Canola | cytosol | 16.42 | 30.58 |
| CDY02428 | Canola | cytosol, extracellular | 16.29 | 30.33 |
| CDY25226 | Canola | cytosol | 16.29 | 30.33 |
| CDX73571 | Canola | cytosol | 30.28 | 30.28 |
| CDX78154 | Canola | cytosol | 30.15 | 30.11 |
| CDX67563 | Canola | cytosol | 33.78 | 28.56 |
| CDY33111 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.46 | 28.49 |
| CDY24076 | Canola | cytosol | 16.29 | 28.4 |
| CDY30665 | Canola | cytosol | 16.29 | 28.4 |
| CDY36602 | Canola | cytosol | 16.29 | 28.4 |
| CDY20470 | Canola | cytosol, plasma membrane | 16.29 | 28.4 |
| CDX74842 | Canola | cytosol | 15.75 | 28.4 |
| CDY39033 | Canola | cytosol | 15.48 | 28.33 |
| CDY02494 | Canola | cytosol | 16.15 | 28.17 |
| CDY25685 | Canola | cytosol | 16.02 | 27.93 |
| CDY35832 | Canola | cytosol | 15.07 | 26.73 |
| CDX70903 | Canola | cytosol | 14.94 | 26.68 |
| CDX88666 | Canola | cytosol | 14.4 | 26.49 |
| CDY43865 | Canola | cytosol | 14.4 | 26.49 |
| CDY32714 | Canola | cytosol | 14.4 | 26.49 |
| CDY02806 | Canola | cytosol | 14.4 | 26.49 |
| CDY58566 | Canola | cytosol | 14.4 | 26.49 |
| CDY32995 | Canola | cytosol, extracellular | 14.4 | 26.49 |
| CDX92914 | Canola | cytosol, extracellular | 15.34 | 25.73 |
| CDY08201 | Canola | cytosol | 12.25 | 25.63 |
| CDX97472 | Canola | cytosol | 15.34 | 25.62 |
| CDY14224 | Canola | cytosol | 15.34 | 25.62 |
| CDY35245 | Canola | cytosol | 15.21 | 25.51 |
| CDY06847 | Canola | cytosol | 15.21 | 25.51 |
| CDY20371 | Canola | cytosol, plastid | 15.07 | 25.45 |
| CDY30663 | Canola | cytosol | 14.4 | 24.77 |
| CDY27761 | Canola | cytosol | 13.86 | 24.29 |
| CDY05176 | Canola | cytosol | 13.86 | 24.29 |
| CDY18782 | Canola | cytosol | 13.86 | 24.29 |
| CDY18801 | Canola | cytosol | 13.86 | 24.29 |
| CDX74142 | Canola | cytosol | 13.86 | 24.29 |
| CDY40714 | Canola | cytosol | 13.86 | 24.29 |
| CDX72118 | Canola | plastid | 29.88 | 23.52 |
| CDX89923 | Canola | cytosol | 24.09 | 23.43 |
| CDY59958 | Canola | cytosol | 11.04 | 22.53 |
| CDY56774 | Canola | plastid | 29.88 | 21.81 |
| CDY37450 | Canola | mitochondrion | 25.71 | 20.65 |
| CDY32490 | Canola | mitochondrion | 25.57 | 20.5 |
| CDX88865 | Canola | cytosol, extracellular | 14.94 | 17.65 |
| CDY02982 | Canola | cytosol | 26.92 | 16.96 |
| CDX69950 | Canola | cytosol | 23.28 | 15.84 |
| CDY62119 | Canola | cytosol | 23.15 | 15.75 |
| CDY42324 | Canola | cytosol, extracellular | 15.07 | 15.62 |
| CDY44958 | Canola | cytosol, plasma membrane | 15.07 | 15.53 |
| CDY18139 | Canola | extracellular, vacuole | 5.92 | 14.52 |
| CDY69655 | Canola | cytosol, nucleus | 0.27 | 0.88 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078D8Z8 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | EnsemblPlants:CDX84794 | ProteinID:CDX84794 | ProteinID:CDX84794.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00142090001 | InterPro:P-loop_NTPase | PFAM:PF00004 | PRINTS:PR00830 |
| ScanProsite:PS00674 | PANTHER:PTHR23077 | PANTHER:PTHR23077:SF55 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI0004EDEC3D |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g14360D
Coordinates
chrLK031838:+:1276816..1279709
Molecular Weight (calculated)
81954.3 Da
IEP (calculated)
6.879
GRAVY (calculated)
-0.471
Length
743 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRDVGGRN NSRRDLSRAM DSCGKDLSTA EEIVDALRSC RYGKYERMSR QALVLNVRNV LDARHNNNKR VKEDQEDDDS DEGARGGKMK KQRRKSVSSY
101: SSSEDSGGHI STSEYAKFDL TSECLRGGYA KLNSSTKLAP PPPPPLSGKV GPTFKDFAGI KKVLDELDQY ILSPLLNPPL FGKIGAKPPS GILFHGPPGC
201: GKTRLAHAVA NEAGVPFYQI SATQVLSGVS GESEENIREL FSKAYRTAPS IVFIDEIDAI GSKRENQQRE TEKRIVTQLL TCMDGPPPGD TAAAAGYVVV
301: IGATNTPDAL DPALRRGRRF GREIALTPPD EHARAEILSL VAQRLRLEGS LDMKRIARLT PGFVGADLEE LADMAASLCV KRIMDSRKLQ LSGDSDDGDD
401: RSWLRQPWSE EDLDKLFVRM SDFEEAVKLV KGSLTREGFS TVPDVTWDDV GGLDHLRTEL DDYIVNPIKY PDAFEKFGKK LLETGFLLYG PPGCGKTLVA
501: KAVANEAGAN FIHIKGPELL NKYVGESERA IRTLFQRART SSPCVIFFDE VDALTGRRGR EGDHLVVGGL LNQFLTELHG GDRRDVYVIG ATNRLDVIDG
601: AFLRPGRFAN LVYVPLPNAY ERVSILKSIA KKRPIDPSVD LDAIATKYCE DFSGADLANL MDKAIHVAVK EKIQSSKSSE DGDMDLSDCT IKMTHFKQAL
701: SLVTPSVSKQ QIKHYEEQRD RHHRLQSSTN MDQINVGPSF TFE
101: SSSEDSGGHI STSEYAKFDL TSECLRGGYA KLNSSTKLAP PPPPPLSGKV GPTFKDFAGI KKVLDELDQY ILSPLLNPPL FGKIGAKPPS GILFHGPPGC
201: GKTRLAHAVA NEAGVPFYQI SATQVLSGVS GESEENIREL FSKAYRTAPS IVFIDEIDAI GSKRENQQRE TEKRIVTQLL TCMDGPPPGD TAAAAGYVVV
301: IGATNTPDAL DPALRRGRRF GREIALTPPD EHARAEILSL VAQRLRLEGS LDMKRIARLT PGFVGADLEE LADMAASLCV KRIMDSRKLQ LSGDSDDGDD
401: RSWLRQPWSE EDLDKLFVRM SDFEEAVKLV KGSLTREGFS TVPDVTWDDV GGLDHLRTEL DDYIVNPIKY PDAFEKFGKK LLETGFLLYG PPGCGKTLVA
501: KAVANEAGAN FIHIKGPELL NKYVGESERA IRTLFQRART SSPCVIFFDE VDALTGRRGR EGDHLVVGGL LNQFLTELHG GDRRDVYVIG ATNRLDVIDG
601: AFLRPGRFAN LVYVPLPNAY ERVSILKSIA KKRPIDPSVD LDAIATKYCE DFSGADLANL MDKAIHVAVK EKIQSSKSSE DGDMDLSDCT IKMTHFKQAL
701: SLVTPSVSKQ QIKHYEEQRD RHHRLQSSTN MDQINVGPSF TFE
001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE DEIEKARTKS
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE DEIEKARTKS
Arabidopsis Description
CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.