Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69950 | Canola | cytosol | 97.53 | 97.53 |
| Bra009342.1-P | Field mustard | cytosol | 97.53 | 95.0 |
| AT5G08470.1 | Thale cress | cytosol | 87.91 | 84.96 |
| VIT_00s0125g00170.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 64.1 | 61.73 |
| KRH50491 | Soybean | cytosol | 58.79 | 56.81 |
| Solyc04g057960.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 58.24 | 56.38 |
| HORVU0Hr1G013350.2 | Barley | cytosol | 15.38 | 54.55 |
| GSMUA_Achr11P... | Banana | cytosol | 55.77 | 54.33 |
| EES15200 | Sorghum | cytosol | 47.44 | 47.35 |
| TraesCS7B01G174800.1 | Wheat | cytosol | 44.6 | 47.28 |
| TraesCS7D01G277100.1 | Wheat | cytosol, peroxisome, plastid | 46.52 | 46.61 |
| TraesCS7A01G277100.1 | Wheat | peroxisome | 46.52 | 46.61 |
| HORVU7Hr1G058410.7 | Barley | cytosol, peroxisome | 46.79 | 46.16 |
| TraesCS5D01G306600.2 | Wheat | mitochondrion | 44.87 | 44.79 |
| TraesCS5B01G299200.1 | Wheat | mitochondrion | 44.78 | 44.7 |
| Zm00001d049974_P004 | Maize | peroxisome | 45.42 | 44.48 |
| TraesCS5A01G301500.1 | Wheat | mitochondrion | 43.13 | 43.77 |
| HORVU5Hr1G078590.8 | Barley | plastid | 44.41 | 42.92 |
| CDY25624 | Canola | cytosol | 8.97 | 39.04 |
| CDY20370 | Canola | cytosol | 8.06 | 32.71 |
| CDY39032 | Canola | cytosol | 7.05 | 30.68 |
| CDY25226 | Canola | cytosol | 10.53 | 28.82 |
| CDX71534 | Canola | cytosol | 10.44 | 28.57 |
| CDY02428 | Canola | cytosol, extracellular | 10.44 | 28.57 |
| CDY22373 | Canola | cytosol | 10.44 | 28.57 |
| CDY04161 | Canola | cytosol | 15.29 | 27.69 |
| CDY58566 | Canola | cytosol | 10.16 | 27.48 |
| CDX88666 | Canola | cytosol | 10.07 | 27.23 |
| CDY02806 | Canola | cytosol | 10.07 | 27.23 |
| CDY43865 | Canola | cytosol | 10.07 | 27.23 |
| CDY32714 | Canola | cytosol | 9.98 | 26.98 |
| CDX70903 | Canola | cytosol | 10.26 | 26.92 |
| CDY32995 | Canola | cytosol, extracellular | 9.89 | 26.73 |
| CDY35832 | Canola | cytosol | 10.26 | 26.73 |
| CDY39033 | Canola | cytosol | 9.8 | 26.35 |
| CDY11249 | Canola | cytosol | 19.14 | 26.19 |
| CDY06847 | Canola | cytosol | 10.62 | 26.19 |
| CDY35245 | Canola | cytosol | 10.53 | 25.96 |
| CDX92914 | Canola | cytosol, extracellular | 10.53 | 25.96 |
| CDY14224 | Canola | cytosol | 10.53 | 25.84 |
| CDX97472 | Canola | cytosol | 10.53 | 25.84 |
| CDX73996 | Canola | cytosol | 19.05 | 25.71 |
| CDY07941 | Canola | cytosol | 19.05 | 25.71 |
| CDY13308 | Canola | cytosol | 19.05 | 25.68 |
| CDY41581 | Canola | cytosol | 18.96 | 25.62 |
| CDY54618 | Canola | cytosol | 18.96 | 25.62 |
| CDX80862 | Canola | cytosol, plastid | 18.96 | 25.59 |
| CDY22207 | Canola | cytosol | 18.96 | 25.56 |
| CDY41316 | Canola | cytosol, extracellular | 18.96 | 25.56 |
| CDX74308 | Canola | mitochondrion | 16.39 | 25.35 |
| CDY36602 | Canola | cytosol | 9.71 | 24.88 |
| CDY24076 | Canola | cytosol | 9.71 | 24.88 |
| CDY30665 | Canola | cytosol | 9.71 | 24.88 |
| CDY25685 | Canola | cytosol | 9.71 | 24.88 |
| CDY02494 | Canola | cytosol | 9.71 | 24.88 |
| CDY20470 | Canola | cytosol, plasma membrane | 9.71 | 24.88 |
| CDX74842 | Canola | cytosol | 9.34 | 24.76 |
| CDY20371 | Canola | cytosol, plastid | 9.71 | 24.09 |
| CDX73571 | Canola | cytosol | 16.3 | 23.96 |
| CDY27761 | Canola | cytosol | 9.25 | 23.82 |
| CDY40714 | Canola | cytosol | 9.25 | 23.82 |
| CDY18801 | Canola | cytosol | 9.25 | 23.82 |
| CDY18782 | Canola | cytosol | 9.25 | 23.82 |
| CDX74142 | Canola | cytosol | 9.25 | 23.82 |
| CDY05176 | Canola | cytosol | 9.25 | 23.82 |
| CDX78154 | Canola | cytosol | 16.21 | 23.79 |
| CDY23949 | Canola | cytosol | 15.75 | 23.72 |
| CDY59958 | Canola | cytosol | 7.88 | 23.63 |
| CDY33111 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 15.48 | 23.6 |
| CDX91939 | Canola | cytosol, mitochondrion | 16.67 | 23.42 |
| CDX67563 | Canola | cytosol | 18.68 | 23.21 |
| CDX84794 | Canola | cytosol | 15.75 | 23.15 |
| CDX89923 | Canola | cytosol | 16.03 | 22.91 |
| CDY45794 | Canola | nucleus | 16.48 | 22.58 |
| CDY08201 | Canola | cytosol | 7.23 | 22.25 |
| CDY30663 | Canola | cytosol | 8.7 | 21.99 |
| CDX72118 | Canola | plastid | 18.68 | 21.61 |
| CDY32490 | Canola | mitochondrion | 17.86 | 21.04 |
| CDY37450 | Canola | mitochondrion | 17.58 | 20.76 |
| CDX89698 | Canola | endoplasmic reticulum | 12.91 | 20.29 |
| CDY56774 | Canola | plastid | 18.86 | 20.24 |
| CDX88865 | Canola | cytosol, extracellular | 9.98 | 17.33 |
| CDY42324 | Canola | cytosol, extracellular | 10.35 | 15.76 |
| CDY44958 | Canola | cytosol, plasma membrane | 10.35 | 15.67 |
| CDY02982 | Canola | cytosol | 15.57 | 14.42 |
| CDY18139 | Canola | extracellular, vacuole | 3.94 | 14.19 |
| CDY69655 | Canola | cytosol, nucleus | 0.09 | 0.44 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:23.4.1.5.1.1 | Gene3D:3.10.330.10 | Gene3D:3.40.50.300 | GO:A0A078J6M3 | UniProt:A0A078J6M3 |
| InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | InterPro:Asp_de-COase-like_dom_sf | InterPro:CDC48_domain_2-like_sf | EnsemblPlants:CDY62119 |
| ProteinID:CDY62119 | ProteinID:CDY62119.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 |
| GO:GO:0005778 | GO:GO:0006625 | GO:GO:0006810 | GO:GO:0007031 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0042623 | EnsemblPlantsGene:GSBRNA2T00035976001 | InterPro:P-loop_NTPase |
| InterPro:PEX-N_psi_beta-barrel | PFAM:PF00004 | PFAM:PF09262 | ScanProsite:PS00674 | PANTHER:PTHR23077 | PANTHER:PTHR23077:SF12 |
| InterPro:Pex1 | SMART:SM00382 | SUPFAM:SSF50692 | SUPFAM:SSF52540 | SUPFAM:SSF54585 | UniParc:UPI0004EE1CCC |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng39220DBnaCnng39220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6M3]
Coordinates
chrLK034101:+:15250..21732
Molecular Weight (calculated)
119522.0 Da
IEP (calculated)
6.233
GRAVY (calculated)
-0.070
Length
1092 amino acids
Sequence
(BLAST)
(BLAST)
0001: METEAVVGTV PGVDCFVSLP RQILHVLQST SSSLLPPLLP VELRSGDRRW PVAWSGSSSS SSAIEVARVF AESISLPDGT VVQVRVLSNV PKATLVTVEP
0101: ETEDDWEVLE LNAELAESAI LSQVRILHEA MKFPLWLHDR TVIRFAVVST FPPKGVVQLV AGTEVAVAPK RRERNLNAKK GPDALNKDVK IMLRVQDTTR
0201: SAFHEADVKG FDVRVALTSV AYIHPETAEK YSLESLQMIS VSPRIPLKGS VKKDEDLNKK NSDASKVKEP RRAILRLVFS DLAAKGHVMM VESLRLYLGA
0301: GLHSWVHLRG CNVNVNKEVP ALSLSPCIFK ISEKENVLDR GTDMLGNPNS NRRSSHPPSG LTTNVDVVDW SVHEKVVTAL LSEGLQIEGE QDNAYQLKNK
0401: KGLECLTRLW SLAQRDAIAS VTGVDVSSLI VGRETLFHFE IRKKDKIVPL EILYVMTVSD ESSLGDKFIA YELTLDRSEK KDNVVHIEPM LEKMNLGEPI
0501: FFSSAKERHY NKGVSPDVSS LAWMGSVVSD VIKRMTVLLS PTAGMWFSKF SIPSPGHILI YGPPGSGKTI LARAAAKYLE EQKDLLAHVI LVSCSALAME
0601: KVQHIRQTLS SVIAEGLEHA PSVIILDDLD SIISSSSDNE GSQASNAITM LTKFLTDVID DYGEYRNTSC GIGPLAFVAS VQSLEQIPQT LSSSGRFDFH
0701: VQLAAPATSE RGAILKHEIQ KRLLECSEDI LLELAAKCEG YDAYDLEILV DRAVHAAIGR HLPCESNVSK YTLVKEDFTL AMHEFVPVAM RDITKSASEG
0801: GRSGWEDVGG VTDVKNAIKE MIELPSRFPK IFAKSPLRLR SNVLLYGPPG CGKTHIVGAA AAACSLRFIS VKGPELLNKY IGASEQSVRD IFAKAAAAAP
0901: CILFFDEFDS IAPKRGHDNT GVTDRVVNQF LTELDGVEVL TGVFVFAATS RPDLLDPALL RPGRLDRLLM CDFPSPPERL EILTVLSRKL PMADDVNLDP
1001: IAAITEGFSG ADLQALLSDA QLAAVHEFLS KEDRTEPGTT PMITDPLLKS IASKTKPSVS EAEKQKLYDI YSQFLDSRKS SKEAKGKRAT LA
0101: ETEDDWEVLE LNAELAESAI LSQVRILHEA MKFPLWLHDR TVIRFAVVST FPPKGVVQLV AGTEVAVAPK RRERNLNAKK GPDALNKDVK IMLRVQDTTR
0201: SAFHEADVKG FDVRVALTSV AYIHPETAEK YSLESLQMIS VSPRIPLKGS VKKDEDLNKK NSDASKVKEP RRAILRLVFS DLAAKGHVMM VESLRLYLGA
0301: GLHSWVHLRG CNVNVNKEVP ALSLSPCIFK ISEKENVLDR GTDMLGNPNS NRRSSHPPSG LTTNVDVVDW SVHEKVVTAL LSEGLQIEGE QDNAYQLKNK
0401: KGLECLTRLW SLAQRDAIAS VTGVDVSSLI VGRETLFHFE IRKKDKIVPL EILYVMTVSD ESSLGDKFIA YELTLDRSEK KDNVVHIEPM LEKMNLGEPI
0501: FFSSAKERHY NKGVSPDVSS LAWMGSVVSD VIKRMTVLLS PTAGMWFSKF SIPSPGHILI YGPPGSGKTI LARAAAKYLE EQKDLLAHVI LVSCSALAME
0601: KVQHIRQTLS SVIAEGLEHA PSVIILDDLD SIISSSSDNE GSQASNAITM LTKFLTDVID DYGEYRNTSC GIGPLAFVAS VQSLEQIPQT LSSSGRFDFH
0701: VQLAAPATSE RGAILKHEIQ KRLLECSEDI LLELAAKCEG YDAYDLEILV DRAVHAAIGR HLPCESNVSK YTLVKEDFTL AMHEFVPVAM RDITKSASEG
0801: GRSGWEDVGG VTDVKNAIKE MIELPSRFPK IFAKSPLRLR SNVLLYGPPG CGKTHIVGAA AAACSLRFIS VKGPELLNKY IGASEQSVRD IFAKAAAAAP
0901: CILFFDEFDS IAPKRGHDNT GVTDRVVNQF LTELDGVEVL TGVFVFAATS RPDLLDPALL RPGRLDRLLM CDFPSPPERL EILTVLSRKL PMADDVNLDP
1001: IAAITEGFSG ADLQALLSDA QLAAVHEFLS KEDRTEPGTT PMITDPLLKS IASKTKPSVS EAEKQKLYDI YSQFLDSRKS SKEAKGKRAT LA
0001: MSRNRQIIIP DDVMETEAVV NTVAGVDCFV SLPRQLLHAL QSTSSSPLPP LLPVELRSGD RRWSVAWSGS SSSSSAIEIA RVFAESISLP DGTVVKVRVL
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA
Arabidopsis Description
PEX1Peroxisome biogenesis protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.