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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY24076 Canola cytosol 99.53 99.53
CDY36602 Canola cytosol 99.53 99.53
AT1G53750.1 Thale cress cytosol 99.3 99.3
CDY02494 Canola cytosol 98.59 98.59
CDY25685 Canola cytosol 98.36 98.36
EES01223 Sorghum cytosol 97.18 97.18
CDX74842 Canola cytosol 93.9 97.09
PGSC0003DMT400023656 Potato cytosol 97.42 96.96
Zm00001d018309_P003 Maize cytosol 96.95 96.95
EES07646 Sorghum cytosol 96.95 96.95
CDY20470 Canola cytosol, plasma membrane 96.71 96.71
PGSC0003DMT400012446 Potato cytosol 96.95 96.27
Solyc06g063140.2.1 Tomato cytosol, extracellular, nucleus, plastid 96.95 96.27
TraesCS7B01G060900.1 Wheat golgi 96.24 96.24
TraesCS7A01G156800.1 Wheat cytosol 96.24 96.24
TraesCS7D01G157200.1 Wheat cytosol 96.24 96.24
TraesCS6B01G376500.1 Wheat golgi 95.54 95.54
HORVU6Hr1G083150.1 Barley cytosol 95.54 95.54
TraesCS6D01G326400.1 Wheat cytosol 95.54 95.54
TraesCSU01G080700.1 Wheat cytosol 95.54 95.54
HORVU7Hr1G032070.1 Barley cytosol 95.77 91.89
CDY08201 Canola cytosol 75.82 90.99
Zm00001d052078_P003 Maize cytosol 96.95 90.37
VIT_11s0016g00230.t01 Wine grape cytosol 79.34 79.53
CDY30663 Canola cytosol 78.87 77.78
KRH06953 Soybean cytosol 48.59 76.67
CDY20370 Canola cytosol 29.11 46.1
CDX70903 Canola cytosol 44.84 45.91
CDY35832 Canola cytosol 44.6 45.35
CDY39032 Canola cytosol 25.82 43.82
CDX71534 Canola cytosol 39.2 41.85
CDY22373 Canola cytosol 39.2 41.85
CDY25226 Canola cytosol 38.97 41.6
CDY02428 Canola cytosol, extracellular 38.73 41.35
CDY27761 Canola cytosol 38.73 38.92
CDY05176 Canola cytosol 38.73 38.92
CDY40714 Canola cytosol 38.73 38.92
CDY18801 Canola cytosol 38.73 38.92
CDY18782 Canola cytosol 38.73 38.92
CDX74142 Canola cytosol 38.73 38.92
CDY43865 Canola cytosol 36.62 38.61
CDY58566 Canola cytosol 36.62 38.61
CDY02806 Canola cytosol 36.62 38.61
CDX88666 Canola cytosol 36.62 38.61
CDY32714 Canola cytosol 36.62 38.61
CDY32995 Canola cytosol, extracellular 36.62 38.61
CDY06847 Canola cytosol 38.97 37.47
CDY35245 Canola cytosol 38.73 37.25
CDY14224 Canola cytosol 38.73 37.08
CDX97472 Canola cytosol 38.73 37.08
CDX92914 Canola cytosol, extracellular 38.5 37.02
CDY39033 Canola cytosol 34.51 36.21
CDY25624 Canola cytosol 20.42 34.66
CDY20371 Canola cytosol, plastid 33.8 32.73
CDY59958 Canola cytosol 27.93 32.69
CDX88865 Canola cytosol, extracellular 44.13 29.89
CDY42324 Canola cytosol, extracellular 45.07 26.78
CDY44958 Canola cytosol, plasma membrane 44.6 26.35
CDY04161 Canola cytosol 26.76 18.91
CDY11249 Canola cytosol 32.86 17.54
CDY41581 Canola cytosol 33.1 17.45
CDY54618 Canola cytosol 33.1 17.45
CDY07941 Canola cytosol 33.1 17.43
CDX73996 Canola cytosol 33.1 17.43
CDY22207 Canola cytosol 33.1 17.41
CDY41316 Canola cytosol, extracellular 33.1 17.41
CDY13308 Canola cytosol 32.86 17.28
CDX80862 Canola cytosol, plastid 32.63 17.18
CDX74308 Canola mitochondrion 28.4 17.14
CDX84794 Canola cytosol 28.4 16.29
CDY23949 Canola cytosol 27.7 16.28
CDX67563 Canola cytosol 32.63 15.81
CDX91939 Canola cytosol, mitochondrion 28.64 15.7
CDY33111 Canola endoplasmic reticulum, plasma membrane, vacuole 26.29 15.64
CDX78154 Canola cytosol 27.0 15.46
CDX73571 Canola cytosol 26.53 15.21
CDY45794 Canola nucleus 28.17 15.06
CDX89923 Canola cytosol 25.82 14.4
CDX89698 Canola endoplasmic reticulum 22.3 13.67
CDX72118 Canola plastid 29.81 13.45
CDY32490 Canola mitochondrion 27.46 12.62
CDY56774 Canola plastid 29.81 12.48
CDY37450 Canola mitochondrion 27.0 12.43
CDX69950 Canola cytosol 25.12 9.8
CDY02982 Canola cytosol 27.0 9.75
CDY62119 Canola cytosol 24.88 9.71
CDY18139 Canola extracellular, vacuole 3.99 5.61
CDY69655 Canola cytosol, nucleus 0.23 0.44
Protein Annotations
Gene3D:1.10.8.60MapMan:19.2.6.2.1.1Gene3D:2.40.50.140InterPro:26S_Psome_P45-likeGene3D:3.40.50.300GO:A0A078GW15
UniProt:A0A078GW15InterPro:AAA+_ATPaseInterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreEnsemblPlants:CDY30665ProteinID:CDY30665
ProteinID:CDY30665.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0016787GO:GO:0019538GO:GO:0030163EnsemblPlantsGene:GSBRNA2T00045985001
InterPro:P-loop_NTPasePFAM:PF00004ScanProsite:PS00674PANTHER:PTHR23073PANTHER:PTHR23073:SF60SMART:SM00382
SUPFAM:SSF52540TIGRFAMs:TIGR01242UniParc:UPI0004EDDC04:::
Description
BnaC06g10290DBnaC06g10290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GW15]
Coordinates
chrLK032257:-:243588..245998
Molecular Weight (calculated)
47836.0 Da
IEP (calculated)
6.560
GRAVY (calculated)
-0.413
Length
426 amino acids
Sequence
(BLAST)
001: MSRDIEDEIR DEKNPRPLDE DDIALLKTYG LGPYSAPIKK VEKEIKELAK RINDLCGIKE SDTGLAPPSQ WDLVSDKQMM QEEQPLQVAR CTKIISPNTE
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN
Best Arabidopsis Sequence Match ( AT1G53750.1 )
(BLAST)
001: MVRDIEDEIR DEKNPRPLDE DDIALLKTYG LGPYSAPIKK VEKEIKDLAK KINDLCGIKE SDTGLAPPSQ WDLVSDKQMM QEEQPLQVAR CTKIISPNTE
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN
Arabidopsis Description
RPT1ARPT1A [Source:UniProtKB/TrEMBL;Acc:A0A178W3N8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.