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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY04161 Canola cytosol 81.98 97.35
AT2G03670.1 Thale cress cytosol 74.58 88.56
KRH70928 Soybean cytosol 59.92 70.79
Solyc05g012190.2.1 Tomato cytosol 57.82 67.76
PGSC0003DMT400072919 Potato cytosol 57.68 67.59
Os05t0376200-00 Rice cytosol 34.92 63.94
KXG26645 Sorghum cytosol 50.7 63.91
Zm00001d025776_P002 Maize cytosol 50.56 63.73
TraesCS2A01G355200.1 Wheat cytosol 50.14 63.32
TraesCS2B01G373100.1 Wheat cytosol 50.28 63.27
HORVU2Hr1G086170.2 Barley cytosol 50.14 63.09
TraesCS2D01G353100.1 Wheat cytosol 49.86 62.85
Os04t0498800-01 Rice cytosol 48.6 60.21
GSMUA_Achr6P11080_001 Banana plastid 49.72 59.43
CDY02982 Canola cytosol 72.91 44.27
CDY25624 Canola cytosol 13.69 39.04
CDY20370 Canola cytosol 12.15 32.34
CDY39032 Canola cytosol 10.75 30.68
CDX74308 Canola mitochondrion 27.79 28.19
CDY11249 Canola cytosol 31.28 28.07
CDY54618 Canola cytosol 31.42 27.85
CDY41581 Canola cytosol 31.42 27.85
CDY13308 Canola cytosol 31.42 27.78
CDY02806 Canola cytosol 15.64 27.72
CDY32714 Canola cytosol 15.64 27.72
CDY32995 Canola cytosol, extracellular 15.64 27.72
CDX88666 Canola cytosol 15.64 27.72
CDY58566 Canola cytosol 15.64 27.72
CDY43865 Canola cytosol 15.64 27.72
CDY07941 Canola cytosol 31.28 27.69
CDX73996 Canola cytosol 31.28 27.69
CDY41316 Canola cytosol, extracellular 31.28 27.65
CDY22207 Canola cytosol 31.28 27.65
CDX84794 Canola cytosol 28.49 27.46
CDX80862 Canola cytosol, plastid 31.01 27.44
CDY02428 Canola cytosol, extracellular 15.22 27.32
CDY25226 Canola cytosol 15.22 27.32
CDX71534 Canola cytosol 15.22 27.32
CDY22373 Canola cytosol 15.22 27.32
CDY23949 Canola cytosol 27.23 26.9
CDY40714 Canola cytosol 15.78 26.65
CDY05176 Canola cytosol 15.78 26.65
CDY18801 Canola cytosol 15.78 26.65
CDY18782 Canola cytosol 15.78 26.65
CDX74142 Canola cytosol 15.78 26.65
CDY27761 Canola cytosol 15.78 26.65
CDX73571 Canola cytosol 27.65 26.65
CDX78154 Canola cytosol 27.65 26.61
CDX74842 Canola cytosol 15.22 26.46
CDX70903 Canola cytosol 15.36 26.44
CDX91939 Canola cytosol, mitochondrion 28.63 26.38
CDY39033 Canola cytosol 14.94 26.35
CDY02494 Canola cytosol 15.64 26.29
CDY30665 Canola cytosol 15.64 26.29
CDY36602 Canola cytosol 15.64 26.29
CDY25685 Canola cytosol 15.64 26.29
CDY24076 Canola cytosol 15.64 26.29
CDY35832 Canola cytosol 15.36 26.25
CDY20470 Canola cytosol, plasma membrane 15.5 26.06
CDY35245 Canola cytosol 16.06 25.96
CDX92914 Canola cytosol, extracellular 16.06 25.96
CDY14224 Canola cytosol 16.06 25.84
CDX97472 Canola cytosol 16.06 25.84
CDY06847 Canola cytosol 15.92 25.73
CDY08201 Canola cytosol 12.43 25.07
CDX67563 Canola cytosol 30.45 24.8
CDY45794 Canola nucleus 27.51 24.72
CDY20371 Canola cytosol, plastid 14.94 24.32
CDY59958 Canola cytosol 12.15 23.9
CDY30663 Canola cytosol 14.11 23.38
CDX72118 Canola plastid 30.73 23.31
CDX89698 Canola endoplasmic reticulum 22.07 22.73
CDX89923 Canola cytosol 24.02 22.51
CDY56774 Canola plastid 30.31 21.32
CDY32490 Canola mitochondrion 24.16 18.66
CDY37450 Canola mitochondrion 24.02 18.59
CDX88865 Canola cytosol, extracellular 15.36 17.49
CDY18139 Canola extracellular, vacuole 6.7 15.84
CDX69950 Canola cytosol 23.74 15.57
CDY62119 Canola cytosol 23.6 15.48
CDY42324 Canola cytosol, extracellular 15.36 15.34
CDY44958 Canola cytosol, plasma membrane 15.36 15.26
CDY69655 Canola cytosol, nucleus 0.28 0.88
Protein Annotations
Gene3D:1.10.8.60Gene3D:3.40.50.300MapMan:35.1GO:A0A078H5I5UniProt:A0A078H5I5InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreEnsemblPlants:CDY33111ProteinID:CDY33111ProteinID:CDY33111.1GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00053775001InterPro:Interferon-induced_GILTInterPro:P-loop_NTPasePFAM:PF00004PFAM:PF03227ScanProsite:PS00674
PFscan:PS51257PANTHER:PTHR23077PANTHER:PTHR23077:SF117SMART:SM00382SUPFAM:SSF52540SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EDC6E9SEG:seg:::
Description
BnaC09g22070DBnaC09g22070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5I5]
Coordinates
chrLK032306:+:91639..95938
Molecular Weight (calculated)
78121.1 Da
IEP (calculated)
7.613
GRAVY (calculated)
-0.006
Length
716 amino acids
Sequence
(BLAST)
001: MRSSSSNKCV LFPCLFFACL LFTISEKLVA GESDKVKLNL YYESLCPGCR VFIVNYLVKI FDSDLHTVTD LKLVPFGNAQ VSDNLTVTCQ VIFSFSLFLL
101: ITYLLLSLSL PNLMETQTSG CDNIVGDDTW RAEAEIGGNE RALQALRELI IFPFRYPLEA RTLGLKWSRG LLLYGPPGTG KTSLVRAVVQ ECDAHLTVLS
201: PHSVHRAHAG ESEKVLREAF AEASSHAGSD KPSVIFIDEI DVLCPRRSSR GEQGVRIASQ LFTLMDSNKP SSSPPRVVVV ASTNRLDAID PALRRAGRFD
301: TLVEVSTPNE EDRLKILQLY TKKVSVDPTL DLQAIATSCN GFVGADLEAL CREATISASK RSSDSLILTS QDFKVAKSVV GPSITRGITV EIPKVTWDDV
401: GGLKDLKKKL QQAVEWPIKH SAAFTKVGIS PMRGILLHGP PGCSKTTLAK AAANAAQASF FSLSCAELFS MYVGEGEALL RNTFQRARLA SPSIIFFDEA
501: DVVACKRGDE GSSNSSTVGE RLLSTLLTEM DGLEEAKGIL VLAATNRPYA VDAALMRPGR FDLVLYVPPP DVEARLEILQ VHTRNMRLGD DVDLRKMAEE
601: TELFTGAELE GLCRESGTVS LRENIAASGV FNRHFQTAKK SLKPALTVEE VETYASFRKS KSSDSRTVRV EKKKVNHSNV LGLGLSWKVG VLSLMLVAAG
701: NFYLKQTKHG ELAAAT
Best Arabidopsis Sequence Match ( AT2G03670.1 )
(BLAST)
001: MLETESSVCD NIAGNEKWRA EAEIGGNERA LQALRELIIF PFRYPLEART LGLKWPRGLL LYGPPGTGKT SLVRAVVQEC DAHLIVLSPH SVHRAHAGES
101: EKVLREAFAE ASSHAVSDKP SVIFIDEIDV LCPRRDARRE QDVRIASQLF TLMDSNKPSS SAPRVVVVAS TNRVDAIDPA LRRAGRFDAL VEVSTPNEED
201: RLKILQLYTK KVNLDPSVDL QAIAISCNGY VGADLEALCR EATISASKRS SDSLILTSQD FKIAKSVVGP SINRGITVEI PKVTWDDVGG LKDLKKKLQQ
301: AVEWPIKHSA AFVKMGISPM RGILLHGPPG CSKTTLAKAA ANAAQASFFS LSCAELFSMY VGEGEALLRN TFQRARLASP SIIFFDEADV VACKRGDESS
401: SNSSTVGERL LSTLLTEMDG LEEAKGILVL AATNRPYAID AALMRPGRFD LVLYVPPPDL EARFEILQVH TRNMTLGDDV DLRKIAEETD LFTGAELEGL
501: CRESGTVSLR ENIAATAVFN RHFQTAKSSL KPALTIEEVE TYSSFRKAAK RSDSKPIPIN KKKATSTVFG FSWQLGVLSL LLLATGNYYF NHTKHELLVA
601: SAT
Arabidopsis Description
CDC48BCell division control protein 48 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPR1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.