Factsheet for Zm00001d025776_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26645	Sorghum	cytosol	92.25	92.25
TraesCS2B01G373100.1	Wheat	cytosol	82.39	82.25
TraesCS2D01G353100.1	Wheat	cytosol	82.04	82.04
HORVU2Hr1G086170.2	Barley	cytosol	82.04	81.9
TraesCS2A01G355200.1	Wheat	cytosol	81.69	81.83
Os05t0376200-00	Rice	cytosol	54.58	79.28
Os04t0498800-01	Rice	cytosol	77.11	75.78
GSMUA_Achr6P11080_001	Banana	plastid	70.6	66.94
Solyc05g012190.2.1	Tomato	cytosol	66.73	62.03
PGSC0003DMT400072919	Potato	cytosol	66.37	61.7
KRH70928	Soybean	cytosol	65.67	61.55
Bra017378.1-P	Field mustard	cytosol	63.91	60.2
CDY04161	Canola	cytosol	63.73	60.03
AT2G03670.1	Thale cress	cytosol	63.73	60.03
CDY33111	Canola	endoplasmic reticulum, plasma membrane, vacuole	63.73	50.56
Zm00001d045163_P001	Maize	mitochondrion	12.15	39.2
Zm00001d009592_P001	Maize	cytosol	17.25	37.4
Zm00001d032117_P001	Maize	cytosol	18.66	33.12
Zm00001d046539_P002	Maize	cytosol, mitochondrion	22.01	31.41
Zm00001d015788_P001	Maize	plasma membrane	21.65	30.75
Zm00001d053649_P002	Maize	cytosol, mitochondrion	21.65	30.75
Zm00001d045566_P001	Maize	cytosol, mitochondrion	40.49	29.95
Zm00001d035913_P002	Maize	cytosol, mitochondrion	38.56	29.88
CDY02982	Canola	cytosol	61.09	29.43
Zm00001d053616_P002	Maize	cytosol	21.83	29.38
Zm00001d016439_P003	Maize	cytosol, extracellular, plasma membrane	21.83	29.38
Zm00001d022096_P002	Maize	mitochondrion	38.91	29.19
Zm00001d050303_P001	Maize	cytosol	40.32	28.99
Zm00001d028801_P001	Maize	cytosol, extracellular	22.54	28.7
Zm00001d018309_P003	Maize	cytosol	21.48	28.64
Zm00001d037481_P003	Maize	cytosol, extracellular, plasma membrane	21.65	28.6
Zm00001d048409_P001	Maize	cytosol	40.14	28.36
Zm00001d027707_P001	Maize	cytosol, plasma membrane	40.14	28.25
Zm00001d032859_P006	Maize	plasma membrane	39.96	28.02
Zm00001d022573_P001	Maize	cytosol, extracellular, plasma membrane	22.01	27.96
Zm00001d014124_P001	Maize	cytosol, plasma membrane	39.79	27.87
Zm00001d050616_P002	Maize	plastid	21.13	27.65
Zm00001d002717_P001	Maize	mitochondrion	19.54	27.21
Zm00001d007215_P001	Maize	cytosol	22.01	26.94
Zm00001d052078_P003	Maize	cytosol	21.65	26.91
Zm00001d018409_P007	Maize	cytosol	21.13	26.79
Zm00001d027244_P001	Maize	cytosol	17.25	26.78
Zm00001d053999_P001	Maize	cytosol	18.49	25.55
Zm00001d049140_P006	Maize	cytosol, plastid	38.03	21.49
Zm00001d015886_P002	Maize	cytosol	17.43	18.27
Zm00001d002462_P010	Maize	mitochondrion	30.11	16.09
Zm00001d049974_P004	Maize	peroxisome	28.35	14.44
Zm00001d033491_P001	Maize	cytosol, plasma membrane, plastid	1.76	3.95

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100192818	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	ProteinID:AQK44550.1
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0008150	GO:GO:0009987	GO:GO:0051301	UniProt:K7TUL7	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF117	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000221D944
EnsemblPlantsGene:Zm00001d025776	EnsemblPlants:Zm00001d025776_P002	EnsemblPlants:Zm00001d025776_T002	SEG:seg	:	:

Description

Cell division control protein 48 homolog B

Coordinates

chr10:+:129145379..129150948

Molecular Weight (calculated)

61818.5 Da

IEP (calculated)

7.993

GRAVY (calculated)

-0.157

Length

568 amino acids

Sequence
(BLAST)

001: MGTAIVSDGG GEGSDGKSVD GWQAEKAVAG NRRALEALRE LVAYPFLYAR ESRLLGLKWP RGLLLHGPPG TGKTSLVRAI VRECNAHLTT INPYSVHKAH
101: VGEGEKFLRE AFSEAYSQAL RGKPAVIFID ELDAICPRRN SRRENESRIV GQLLTLMDGN KKASKMLPHI VVVASTNRID AVDPALRRAG RFDSEVEVAV
201: PTVEERLLIL KLYTKNLHLD EKVDLQTVAA FCNGYVGADL EALCREAAKL AYHRMLNLCE GDKVLKLLME DWECARSMVG PSITRGVTKE ISIVSWDDIG
301: GLKDLKKELQ KVVEWPIKHA AAFSRLGIPP VRGVLLHGPP GCSKTTLAKA AAHAAQASFF SLSGADLYSK YVGEGEALLR RTFQKARLAS PSIIFFDEAD
401: AIAPKRTGPG GNSSGNATVG ERLLSTLLTE MDGLELATGI IVLGATNRPN AIDAALLRPG RFDKVLYVPP PDVEGRHEIL RIHTRKMKLG EDVDLWKVAE
501: CTELFTGADL EGLCREAGMA ALREDISASL IHDAHFQAAR SSLSPSLTKA VVDEYSKVDI NDPSSRKH

Best Arabidopsis Sequence Match ( AT2G03670.1 )
(BLAST)

001: MLETESSVCD NIAGNEKWRA EAEIGGNERA LQALRELIIF PFRYPLEART LGLKWPRGLL LYGPPGTGKT SLVRAVVQEC DAHLIVLSPH SVHRAHAGES
101: EKVLREAFAE ASSHAVSDKP SVIFIDEIDV LCPRRDARRE QDVRIASQLF TLMDSNKPSS SAPRVVVVAS TNRVDAIDPA LRRAGRFDAL VEVSTPNEED
201: RLKILQLYTK KVNLDPSVDL QAIAISCNGY VGADLEALCR EATISASKRS SDSLILTSQD FKIAKSVVGP SINRGITVEI PKVTWDDVGG LKDLKKKLQQ
301: AVEWPIKHSA AFVKMGISPM RGILLHGPPG CSKTTLAKAA ANAAQASFFS LSCAELFSMY VGEGEALLRN TFQRARLASP SIIFFDEADV VACKRGDESS
401: SNSSTVGERL LSTLLTEMDG LEEAKGILVL AATNRPYAID AALMRPGRFD LVLYVPPPDL EARFEILQVH TRNMTLGDDV DLRKIAEETD LFTGAELEGL
501: CRESGTVSLR ENIAATAVFN RHFQTAKSSL KPALTIEEVE TYSSFRKAAK RSDSKPIPIN KKKATSTVFG FSWQLGVLSL LLLATGNYYF NHTKHELLVA
601: SAT

Arabidopsis Description

CDC48BCell division control protein 48 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.