Factsheet for Zm00001d033491_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002462_P010	Maize	mitochondrion	93.68	22.3
CDY18139	Canola	extracellular, vacuole	17.39	14.52
HORVU3Hr1G029660.1	Barley	cytosol, peroxisome	1.19	8.82
Zm00001d027244_P001	Maize	cytosol	6.72	4.64
Zm00001d027707_P001	Maize	cytosol, plasma membrane	14.23	4.46
Zm00001d050303_P001	Maize	cytosol	13.83	4.43
Zm00001d032859_P006	Maize	plasma membrane	13.83	4.32
Zm00001d014124_P001	Maize	cytosol, plasma membrane	13.83	4.32
Zm00001d048409_P001	Maize	cytosol	13.44	4.23
Zm00001d002717_P001	Maize	mitochondrion	6.72	4.17
Zm00001d053999_P001	Maize	cytosol	6.72	4.14
Zm00001d049140_P006	Maize	cytosol, plastid	13.83	3.48
Zm00001d035913_P002	Maize	cytosol, mitochondrion	7.91	2.73
Zm00001d049974_P004	Maize	peroxisome	11.07	2.51
Zm00001d022096_P002	Maize	mitochondrion	7.51	2.51
Zm00001d045566_P001	Maize	cytosol, mitochondrion	7.51	2.47
Zm00001d022573_P001	Maize	cytosol, extracellular, plasma membrane	3.56	2.01
Zm00001d007215_P001	Maize	cytosol	3.56	1.94
Zm00001d028801_P001	Maize	cytosol, extracellular	3.16	1.79
Zm00001d025776_P002	Maize	cytosol	3.95	1.76
Zm00001d032117_P001	Maize	cytosol	1.58	1.25
Zm00001d018309_P003	Maize	cytosol	1.98	1.17
Zm00001d037481_P003	Maize	cytosol, extracellular, plasma membrane	1.98	1.16
Zm00001d052078_P003	Maize	cytosol	1.98	1.09
Zm00001d050616_P002	Maize	plastid	1.58	0.92
Zm00001d018409_P007	Maize	cytosol	1.58	0.89
Zm00001d015886_P002	Maize	cytosol	1.58	0.74
Zm00001d016439_P003	Maize	cytosol, extracellular, plasma membrane	0.79	0.47
Zm00001d053616_P002	Maize	cytosol	0.79	0.47
Zm00001d046539_P002	Maize	cytosol, mitochondrion	0.4	0.25
Zm00001d045163_P001	Maize	mitochondrion	0.0	0.0
Os08t0556400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	0.0	0.0
Os08t0556550-01	Rice	cytosol	0.0	0.0
Zm00001d009592_P001	Maize	cytosol	0.0	0.0
HORVU6Hr1G049800.1	Barley	cytosol	0.0	0.0
Zm00001d015788_P001	Maize	plasma membrane	0.0	0.0
Zm00001d053649_P002	Maize	cytosol, mitochondrion	0.0	0.0
CDY69655	Canola	cytosol, nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d033491_P001	EnsemblPlants:Zm00001d033491_T001	EnsemblPlantsGene:Zm00001d033491	ProteinID:ONM07687.1	SEG:seg	UniParc:UPI000844982B
UniProt:A0A1D6KZ84	MapMan:35.1	:	:	:	:

Description

Peroxisome biogenesis protein 6

Coordinates

chr1:-:264154128..264155081

Molecular Weight (calculated)

27804.5 Da

IEP (calculated)

6.833

GRAVY (calculated)

0.060

Length

253 amino acids

Sequence
(BLAST)

001: MGFLPCRAFS ATGFTSMDED VGYVSPLLAF NLGLHVSCLK LLIQREGQPF KFCSRAEEID GTASSRSDLS LHLDLLPCPQ VPKYALHLRV SVMRIPDCGV
101: LASLKINSSF GGSEYQDMVD QALNEYFKFD RFLARGDVFG IQNSWKCVSR CCLTCNKQDN RLNPRNMIYF KVTGMEPSDE PILHVNCNET TLVLGGAPSA
201: AIPPYSFFAS SGNSVPLHSE VVEHLASVIA PALCPSHILP KIKFSTFLYS PPG

Best Arabidopsis Sequence Match ( AT1G03000.1 )
(BLAST)

001: MVERRNPLVL SSTRSTLRSV LNSSQPSSAD GDRVLNKDGD LLRGNARLSA GILRWRKDGE NVSDAKLDSL DDSALVGLST QLLKRLSINS GSLVVVKNIE
101: IGIQRVAQVV VLDPPKTTLE DASLTQVPVS DSLHTMLVFP TYDLMGQQLL DQEVAYLSPM LAFNLSLHIS CLKSLVHRGN GVLEKYFEAK CDEEFIGKSA
201: EDGSKIGLDL EPVSQVPGYA SHLRVSFVKI PECGTIPSLK VNSSFEAEER QGLIDSALQK YFGTDRQLSR GDIFRIYIDW NCGSSICNPC SQRLCSESDD
301: YIYFKVIAME PSNERFLRVN HSQTALVLGG TVSSGLPPDL LVYRSKVPMP LQEETVNILA SVLSPPLCPS ALASKLRVAV LLHGIPGCGK RTVVKYVARR
401: LGLHVVEFSC HSLLASSERK TSTALAQTFN MARRYSPTIL LLRHFDVFKN LGSQDGSLGD RVGVSFEIAS VIRELTEPVS NGDSSMEEKS NSNFSENEVG
501: KFRGHQVLLI ASAESTEGIS PTIRRCFSHE IRMGSLNDEQ RSEMLSQSLQ GVSQFLNISS DEFMKGLVGQ TSGFLPRDLQ ALVADAGANL YISQESETKK
601: INSLSDDLHG VDIHQASQID NSTEKLTAKE DFTKALDRSK KRNASALGAP KVPNVKWDDV GGLEDVKTSI LDTVQLPLLH KDLFSSGLRK RSGVLLYGPP
701: GTGKTLLAKA VATECSLNFL SVKGPELINM YIGESEKNVR DIFEKARSAR PCVIFFDELD SLAPARGASG DSGGVMDRVV SQMLAEIDGL SDSSQDLFII
801: GASNRPDLID PALLRPGRFD KLLYVGVNAD ASYRERVLKA LTRKFKLSED VSLYSVAKKC PSTFTGADMY ALCADAWFQA AKRKVSKSDS GDMPTEEDDP
901: DSVVVEYVDF IKAMDQLSPS LSITELKKYE MLRDQFQGRS S

Arabidopsis Description

PEX6Peroxisome biogenesis protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.