Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15200 | Sorghum | cytosol | 91.21 | 92.96 |
| TraesCS7B01G174800.1 | Wheat | cytosol | 73.09 | 79.13 |
| TraesCS7D01G277100.1 | Wheat | cytosol, peroxisome, plastid | 76.32 | 78.07 |
| TraesCS7A01G277100.1 | Wheat | peroxisome | 75.87 | 77.61 |
| HORVU7Hr1G058410.7 | Barley | cytosol, peroxisome | 76.23 | 76.78 |
| GSMUA_Achr11P... | Banana | cytosol | 52.2 | 51.92 |
| VIT_00s0125g00170.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 48.88 | 48.06 |
| Solyc04g057960.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 47.44 | 46.9 |
| CDX69950 | Canola | cytosol | 44.57 | 45.51 |
| CDY62119 | Canola | cytosol | 44.48 | 45.42 |
| KRH50491 | Soybean | cytosol | 46.01 | 45.4 |
| Bra009342.1-P | Field mustard | cytosol | 44.84 | 44.6 |
| AT5G08470.1 | Thale cress | cytosol | 45.2 | 44.6 |
| Zm00001d045163_P001 | Maize | mitochondrion | 4.93 | 31.25 |
| Zm00001d032117_P001 | Maize | cytosol | 8.61 | 30.0 |
| Zm00001d025776_P002 | Maize | cytosol | 14.44 | 28.35 |
| Zm00001d009592_P001 | Maize | cytosol | 6.55 | 27.86 |
| Zm00001d053649_P002 | Maize | cytosol, mitochondrion | 9.06 | 25.25 |
| Zm00001d015788_P001 | Maize | plasma membrane | 9.06 | 25.25 |
| Zm00001d046539_P002 | Maize | cytosol, mitochondrion | 8.97 | 25.13 |
| Zm00001d053616_P002 | Maize | cytosol | 9.51 | 25.12 |
| Zm00001d016439_P003 | Maize | cytosol, extracellular, plasma membrane | 9.51 | 25.12 |
| Zm00001d028801_P001 | Maize | cytosol, extracellular | 9.33 | 23.32 |
| Zm00001d022573_P001 | Maize | cytosol, extracellular, plasma membrane | 9.24 | 23.04 |
| Zm00001d032859_P006 | Maize | plasma membrane | 16.68 | 22.96 |
| Zm00001d027707_P001 | Maize | cytosol, plasma membrane | 16.5 | 22.8 |
| Zm00001d018309_P003 | Maize | cytosol | 8.7 | 22.77 |
| Zm00001d048409_P001 | Maize | cytosol | 16.41 | 22.76 |
| Zm00001d014124_P001 | Maize | cytosol, plasma membrane | 16.5 | 22.69 |
| Zm00001d050303_P001 | Maize | cytosol | 15.96 | 22.53 |
| Zm00001d007215_P001 | Maize | cytosol | 9.15 | 21.98 |
| Zm00001d035913_P002 | Maize | cytosol, mitochondrion | 14.44 | 21.96 |
| Zm00001d050616_P002 | Maize | plastid | 8.52 | 21.89 |
| Zm00001d052078_P003 | Maize | cytosol | 8.79 | 21.44 |
| Zm00001d045566_P001 | Maize | cytosol, mitochondrion | 14.44 | 20.96 |
| Zm00001d037481_P003 | Maize | cytosol, extracellular, plasma membrane | 8.07 | 20.93 |
| Zm00001d022096_P002 | Maize | mitochondrion | 13.99 | 20.61 |
| Zm00001d018409_P007 | Maize | cytosol | 7.98 | 19.87 |
| Zm00001d049140_P006 | Maize | cytosol, plastid | 17.49 | 19.4 |
| Zm00001d002462_P010 | Maize | mitochondrion | 16.68 | 17.5 |
| Zm00001d002717_P001 | Maize | mitochondrion | 5.92 | 16.18 |
| Zm00001d027244_P001 | Maize | cytosol | 5.11 | 15.57 |
| Zm00001d015886_P002 | Maize | cytosol | 7.44 | 15.31 |
| Zm00001d053999_P001 | Maize | cytosol | 5.47 | 14.84 |
| Zm00001d033491_P001 | Maize | cytosol, plasma membrane, plastid | 2.51 | 11.07 |
Protein Annotations
| Gene3D:1.10.8.60 | EntrezGene:103653276 | MapMan:23.4.1.5.1.1 | Gene3D:3.10.330.10 | Gene3D:3.40.50.300 | UniProt:A0A1D6PZ26 |
| InterPro:AAA+_ATPase | ProteinID:AQK51699.1 | InterPro:ATPase_AAA_core | InterPro:CDC48_domain_2-like_sf | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005777 | GO:GO:0005778 | GO:GO:0006625 | GO:GO:0006629 | GO:GO:0006635 |
| GO:GO:0006810 | GO:GO:0007031 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016558 | GO:GO:0016787 | GO:GO:0042623 | InterPro:P-loop_NTPase |
| InterPro:PEX-N_psi_beta-barrel | PFAM:PF00004 | PFAM:PF09262 | PANTHER:PTHR23077 | PANTHER:PTHR23077:SF12 | InterPro:Pex1 |
| SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF54585 | UniParc:UPI0008456964 | EnsemblPlantsGene:Zm00001d049974 | EnsemblPlants:Zm00001d049974_P004 |
| EnsemblPlants:Zm00001d049974_T004 | SEG:seg | : | : | : | : |
Description
Peroxisome biogenesis protein 1
Coordinates
chr4:+:56336090..56343886
Molecular Weight (calculated)
123031.0 Da
IEP (calculated)
6.373
GRAVY (calculated)
-0.122
Length
1115 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSGGGLEVQV HVVGGARSCF AALPLHLIHD LERTSATGDL PPVLALELRG PAGARWSLAW SGAASRSSAI EVAQELADCI SLPDGTIAQL SVARSLAKAD
0101: SISIEPYSED DWEILESRAD LAEETILKQV GIVYEGMKFP LWLDGHNIVK FVVLSSFPEK TVGIYIHIYI LASLIHCVFL SLVQLVPGTE VVVAPKKRKE
0201: KPSQDLQKQS ALKEQVKIKA LLRVQAADRK YAHTFKYEGV EIGVVVSYAV LIHPDTAASI SVGNLQLVAV SPKSSKKGLP LKGKEVGRKK GISVTKERSH
0301: EAIVYILLSD SVAKGHVMLP YSIRHFISAD VHSWVYIKTY SANIKEDEPL VTISPLKFKM HVKDAHDSSK LVSQEVDTSR ITRIPSENGD FFQKARYSEN
0401: KNIRGADIES ISESVSRQKF FIKHWLIGHL KEMGLHASHT EMNSIVLPTN ILLHLEATDK EGTKGVEFLY FLKLTSENSN FNDSQLNIET TWSVPTSNAD
0501: DLELHFGKFE LGEPVSFDSL VDSGSSDGFK LTRSSLGWME NAMSDVTKRL SVLLSATSLR LFNRIKFPFP GHVIVYGPRG SGKTALTRAS AKYFEDHKDI
0601: LAHIIYIDCS KLALGKAKET RQEIEDSMSE ALLHSPSIII FDDLDSVVSV SSDPQVSQSS SSSDSLVQYL ADIMDEYKDK IQNTCGYGPI AFMASVQSLQ
0701: SLPQDLTSSG RFDFHIELSA LAVPERKALL QHQVEEHDLL CSEEVLSEIA SKCEGYDAYD LEILVDRAVH TAAYRFLLPS NACHNSLKRT LLMEDFFKAM
0801: HGFLPVAMRD LRKYAPDDKD GGWEDVGGLD EAVTIIKETL ELPSKYPNIF TRAPVRLRSN ILLYGPPGCG KTHIVRAAAA ACSLRFISVK GPELLNKYIG
0901: SSEQSVRDFF AKAVAAAPCL LFFDEFDSIA PQRGTHSAGV SDRVVNQKTK EQSKPAFFVC KQFLTELDGV ETLTGVFVFA ATRFDRLVFC DFPRWDERLE
1001: ILKVHSRTVS LASDASLEDV ASLTEGFTGA DLAAILTDAG LAAIHELLDN QENGVPETEP CISKELLMSV TRKARPSTPA DEKMRYDREF GEFVSSRKSI
1101: STKARESKGK KVTLA
0101: SISIEPYSED DWEILESRAD LAEETILKQV GIVYEGMKFP LWLDGHNIVK FVVLSSFPEK TVGIYIHIYI LASLIHCVFL SLVQLVPGTE VVVAPKKRKE
0201: KPSQDLQKQS ALKEQVKIKA LLRVQAADRK YAHTFKYEGV EIGVVVSYAV LIHPDTAASI SVGNLQLVAV SPKSSKKGLP LKGKEVGRKK GISVTKERSH
0301: EAIVYILLSD SVAKGHVMLP YSIRHFISAD VHSWVYIKTY SANIKEDEPL VTISPLKFKM HVKDAHDSSK LVSQEVDTSR ITRIPSENGD FFQKARYSEN
0401: KNIRGADIES ISESVSRQKF FIKHWLIGHL KEMGLHASHT EMNSIVLPTN ILLHLEATDK EGTKGVEFLY FLKLTSENSN FNDSQLNIET TWSVPTSNAD
0501: DLELHFGKFE LGEPVSFDSL VDSGSSDGFK LTRSSLGWME NAMSDVTKRL SVLLSATSLR LFNRIKFPFP GHVIVYGPRG SGKTALTRAS AKYFEDHKDI
0601: LAHIIYIDCS KLALGKAKET RQEIEDSMSE ALLHSPSIII FDDLDSVVSV SSDPQVSQSS SSSDSLVQYL ADIMDEYKDK IQNTCGYGPI AFMASVQSLQ
0701: SLPQDLTSSG RFDFHIELSA LAVPERKALL QHQVEEHDLL CSEEVLSEIA SKCEGYDAYD LEILVDRAVH TAAYRFLLPS NACHNSLKRT LLMEDFFKAM
0801: HGFLPVAMRD LRKYAPDDKD GGWEDVGGLD EAVTIIKETL ELPSKYPNIF TRAPVRLRSN ILLYGPPGCG KTHIVRAAAA ACSLRFISVK GPELLNKYIG
0901: SSEQSVRDFF AKAVAAAPCL LFFDEFDSIA PQRGTHSAGV SDRVVNQKTK EQSKPAFFVC KQFLTELDGV ETLTGVFVFA ATRFDRLVFC DFPRWDERLE
1001: ILKVHSRTVS LASDASLEDV ASLTEGFTGA DLAAILTDAG LAAIHELLDN QENGVPETEP CISKELLMSV TRKARPSTPA DEKMRYDREF GEFVSSRKSI
1101: STKARESKGK KVTLA
0001: MSRNRQIIIP DDVMETEAVV NTVAGVDCFV SLPRQLLHAL QSTSSSPLPP LLPVELRSGD RRWSVAWSGS SSSSSAIEIA RVFAESISLP DGTVVKVRVL
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA
Arabidopsis Description
PEX1Peroxisome biogenesis protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.