Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG99061 | Soybean | cytosol | 36.25 | 58.0 |
| KRG94277 | Soybean | cytosol | 34.69 | 53.62 |
| KRH45638 | Soybean | cytosol | 39.69 | 39.56 |
| KRH25081 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 64.38 | 28.45 |
| Zm00001d027707_P001 | Maize | cytosol, plasma membrane | 70.31 | 27.88 |
| Zm00001d048409_P001 | Maize | cytosol | 70.0 | 27.86 |
| Solyc06g074980.2.1 | Tomato | nucleus | 69.69 | 27.7 |
| CDY11249 | Canola | cytosol | 69.06 | 27.69 |
| PGSC0003DMT400031321 | Potato | cytosol | 69.38 | 27.58 |
| Solyc11g069720.1.1 | Tomato | cytosol, extracellular, nucleus, plastid | 69.38 | 27.58 |
| Zm00001d032859_P006 | Maize | plasma membrane | 69.69 | 27.53 |
| Zm00001d014124_P001 | Maize | cytosol, plasma membrane | 69.69 | 27.5 |
| PGSC0003DMT400050662 | Potato | cytosol | 69.06 | 27.45 |
| VIT_06s0061g00340.t01 | Wine grape | cytosol | 65.62 | 27.45 |
| VIT_08s0040g01480.t01 | Wine grape | cytosol | 69.06 | 27.42 |
| KRH22853 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 69.06 | 27.39 |
| KRG96011 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 69.06 | 27.35 |
| KRH67721 | Soybean | endoplasmic reticulum, nucleus | 69.06 | 27.35 |
| PGSC0003DMT400027096 | Potato | cytosol | 69.06 | 27.35 |
| Solyc10g084050.1.1 | Tomato | cytosol, nucleus, plastid, unclear | 69.06 | 27.35 |
| PGSC0003DMT400055513 | Potato | cytosol | 68.75 | 27.26 |
| KRH26511 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 68.75 | 27.26 |
| KRH19916 | Soybean | endoplasmic reticulum, mitochondrion | 69.06 | 27.25 |
| Solyc09g008070.2.1 | Tomato | cytosol, unclear | 68.75 | 27.23 |
| CDY07941 | Canola | cytosol | 68.75 | 27.19 |
| CDX80862 | Canola | cytosol, plastid | 68.75 | 27.19 |
| CDX73996 | Canola | cytosol | 68.75 | 27.19 |
| Bra001297.1-P | Field mustard | cytosol | 68.75 | 27.19 |
| KRH32530 | Soybean | endoplasmic reticulum, mitochondrion | 69.06 | 27.18 |
| KRH30601 | Soybean | cytosol | 68.44 | 27.17 |
| CDY41316 | Canola | cytosol, extracellular | 68.75 | 27.16 |
| CDY22207 | Canola | cytosol | 68.75 | 27.16 |
| Bra034089.1-P | Field mustard | cytosol | 68.75 | 27.16 |
| AT5G03340.1 | Thale cress | cytosol | 68.75 | 27.16 |
| CDY54618 | Canola | cytosol | 68.44 | 27.1 |
| CDY41581 | Canola | cytosol | 68.44 | 27.1 |
| Bra029795.1-P | Field mustard | cytosol | 68.44 | 27.07 |
| AT3G09840.1 | Thale cress | cytosol | 68.44 | 27.07 |
| CDY13308 | Canola | cytosol | 68.44 | 27.04 |
| Bra003123.1-P | Field mustard | cytosol | 68.44 | 27.04 |
| AT3G53230.1 | Thale cress | cytosol | 68.44 | 26.87 |
| Bra006978.1-P | Field mustard | cytosol | 67.5 | 26.63 |
| CDX67563 | Canola | cytosol | 67.81 | 24.69 |
| GSMUA_Achr3P00260_001 | Banana | cytosol | 37.5 | 24.59 |
| Zm00001d050303_P001 | Maize | cytosol | 60.62 | 24.56 |
| Zm00001d009592_P001 | Maize | cytosol | 20.0 | 24.43 |
| Zm00001d046539_P002 | Maize | cytosol, mitochondrion | 30.0 | 24.12 |
| Zm00001d053649_P002 | Maize | cytosol, mitochondrion | 29.69 | 23.75 |
| Zm00001d015788_P001 | Maize | plasma membrane | 29.69 | 23.75 |
| Zm00001d045163_P001 | Maize | mitochondrion | 12.81 | 23.3 |
| CDX78154 | Canola | cytosol | 54.06 | 23.25 |
| CDX73571 | Canola | cytosol | 53.75 | 23.15 |
| Os10t0442600-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 14.06 | 23.08 |
| Zm00001d018309_P003 | Maize | cytosol | 28.12 | 21.13 |
| Zm00001d016439_P003 | Maize | cytosol, extracellular, plasma membrane | 27.19 | 20.62 |
| Zm00001d053616_P002 | Maize | cytosol | 27.19 | 20.62 |
| Bra005733.1-P | Field mustard | cytosol | 69.06 | 20.02 |
| Zm00001d052078_P003 | Maize | cytosol | 28.12 | 19.69 |
| Zm00001d050616_P002 | Maize | plastid | 26.56 | 19.59 |
| Zm00001d037481_P003 | Maize | cytosol, extracellular, plasma membrane | 26.25 | 19.53 |
| Zm00001d028801_P001 | Maize | cytosol, extracellular | 26.25 | 18.83 |
| Zm00001d022573_P001 | Maize | cytosol, extracellular, plasma membrane | 26.25 | 18.79 |
| Zm00001d018409_P007 | Maize | cytosol | 26.25 | 18.75 |
| Zm00001d025776_P002 | Maize | cytosol | 33.12 | 18.66 |
| Zm00001d007215_P001 | Maize | cytosol | 26.25 | 18.1 |
| Zm00001d035913_P002 | Maize | cytosol, mitochondrion | 35.94 | 15.69 |
| Zm00001d045566_P001 | Maize | cytosol, mitochondrion | 36.25 | 15.1 |
| Zm00001d022096_P002 | Maize | mitochondrion | 34.06 | 14.4 |
| Zm00001d049140_P006 | Maize | cytosol, plastid | 36.88 | 11.74 |
| Zm00001d015886_P002 | Maize | cytosol | 19.06 | 11.25 |
| Zm00001d002462_P010 | Maize | mitochondrion | 37.19 | 11.19 |
| Zm00001d049974_P004 | Maize | peroxisome | 30.0 | 8.61 |
| Zm00001d027244_P001 | Maize | cytosol | 6.25 | 5.46 |
| Zm00001d002717_P001 | Maize | mitochondrion | 6.25 | 4.9 |
| Zm00001d053999_P001 | Maize | cytosol | 5.94 | 4.62 |
| Zm00001d033491_P001 | Maize | cytosol, plasma membrane, plastid | 1.25 | 1.58 |
Protein Annotations
| EnsemblPlants:Zm00001d032117_P001 | EnsemblPlants:Zm00001d032117_T001 | EnsemblPlantsGene:Zm00001d032117 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051301 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_core | InterPro:P-loop_NTPase | PANTHER:PTHR23077 | PANTHER:PTHR23077:SF127 | PFAM:PF00004 | ProteinID:ONM04426.1 |
| SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI000844B19B | UniProt:A0A1D6KNN7 | MapMan:35.1 | : |
Description
Cell division control protein 48 homolog D
Coordinates
chr1:+:213685223..213690923
Molecular Weight (calculated)
35492.4 Da
IEP (calculated)
6.889
GRAVY (calculated)
-0.247
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVAVVDPHG TAAVWCVCRG SASGGERDDP DLPHRVRGVQ RERECVTVSQ SNTGDRAGYD PVFEVTVWYA CRCAVPAVRL RSEGFASSVP VDPRLFRRAG
101: RDYLVADGRR IELGADARFR YAWDRAFRMT AAAVVDVPNV SWKDIGGLEN VKRELQETVQ YPVEHPEKFE KFGMSPSKGV LFYGHPGCGK TLLAKAIANE
201: CEANFISVKG PELLTMWFGE SEANVREIFD KARQSAPCVL FFDELDSIAS QRGSNLGDAR GVADRVLNQL LTKMDGMNAK KTVFIIGAIN RPDIIDPALL
301: RPGRLDQLIY IPLPDEQYRL
101: RDYLVADGRR IELGADARFR YAWDRAFRMT AAAVVDVPNV SWKDIGGLEN VKRELQETVQ YPVEHPEKFE KFGMSPSKGV LFYGHPGCGK TLLAKAIANE
201: CEANFISVKG PELLTMWFGE SEANVREIFD KARQSAPCVL FFDELDSIAS QRGSNLGDAR GVADRVLNQL LTKMDGMNAK KTVFIIGAIN RPDIIDPALL
301: RPGRLDQLIY IPLPDEQYRL
001: MVERRNPLVL SSTRSTLRSV LNSSQPSSAD GDRVLNKDGD LLRGNARLSA GILRWRKDGE NVSDAKLDSL DDSALVGLST QLLKRLSINS GSLVVVKNIE
101: IGIQRVAQVV VLDPPKTTLE DASLTQVPVS DSLHTMLVFP TYDLMGQQLL DQEVAYLSPM LAFNLSLHIS CLKSLVHRGN GVLEKYFEAK CDEEFIGKSA
201: EDGSKIGLDL EPVSQVPGYA SHLRVSFVKI PECGTIPSLK VNSSFEAEER QGLIDSALQK YFGTDRQLSR GDIFRIYIDW NCGSSICNPC SQRLCSESDD
301: YIYFKVIAME PSNERFLRVN HSQTALVLGG TVSSGLPPDL LVYRSKVPMP LQEETVNILA SVLSPPLCPS ALASKLRVAV LLHGIPGCGK RTVVKYVARR
401: LGLHVVEFSC HSLLASSERK TSTALAQTFN MARRYSPTIL LLRHFDVFKN LGSQDGSLGD RVGVSFEIAS VIRELTEPVS NGDSSMEEKS NSNFSENEVG
501: KFRGHQVLLI ASAESTEGIS PTIRRCFSHE IRMGSLNDEQ RSEMLSQSLQ GVSQFLNISS DEFMKGLVGQ TSGFLPRDLQ ALVADAGANL YISQESETKK
601: INSLSDDLHG VDIHQASQID NSTEKLTAKE DFTKALDRSK KRNASALGAP KVPNVKWDDV GGLEDVKTSI LDTVQLPLLH KDLFSSGLRK RSGVLLYGPP
701: GTGKTLLAKA VATECSLNFL SVKGPELINM YIGESEKNVR DIFEKARSAR PCVIFFDELD SLAPARGASG DSGGVMDRVV SQMLAEIDGL SDSSQDLFII
801: GASNRPDLID PALLRPGRFD KLLYVGVNAD ASYRERVLKA LTRKFKLSED VSLYSVAKKC PSTFTGADMY ALCADAWFQA AKRKVSKSDS GDMPTEEDDP
901: DSVVVEYVDF IKAMDQLSPS LSITELKKYE MLRDQFQGRS S
101: IGIQRVAQVV VLDPPKTTLE DASLTQVPVS DSLHTMLVFP TYDLMGQQLL DQEVAYLSPM LAFNLSLHIS CLKSLVHRGN GVLEKYFEAK CDEEFIGKSA
201: EDGSKIGLDL EPVSQVPGYA SHLRVSFVKI PECGTIPSLK VNSSFEAEER QGLIDSALQK YFGTDRQLSR GDIFRIYIDW NCGSSICNPC SQRLCSESDD
301: YIYFKVIAME PSNERFLRVN HSQTALVLGG TVSSGLPPDL LVYRSKVPMP LQEETVNILA SVLSPPLCPS ALASKLRVAV LLHGIPGCGK RTVVKYVARR
401: LGLHVVEFSC HSLLASSERK TSTALAQTFN MARRYSPTIL LLRHFDVFKN LGSQDGSLGD RVGVSFEIAS VIRELTEPVS NGDSSMEEKS NSNFSENEVG
501: KFRGHQVLLI ASAESTEGIS PTIRRCFSHE IRMGSLNDEQ RSEMLSQSLQ GVSQFLNISS DEFMKGLVGQ TSGFLPRDLQ ALVADAGANL YISQESETKK
601: INSLSDDLHG VDIHQASQID NSTEKLTAKE DFTKALDRSK KRNASALGAP KVPNVKWDDV GGLEDVKTSI LDTVQLPLLH KDLFSSGLRK RSGVLLYGPP
701: GTGKTLLAKA VATECSLNFL SVKGPELINM YIGESEKNVR DIFEKARSAR PCVIFFDELD SLAPARGASG DSGGVMDRVV SQMLAEIDGL SDSSQDLFII
801: GASNRPDLID PALLRPGRFD KLLYVGVNAD ASYRERVLKA LTRKFKLSED VSLYSVAKKC PSTFTGADMY ALCADAWFQA AKRKVSKSDS GDMPTEEDDP
901: DSVVVEYVDF IKAMDQLSPS LSITELKKYE MLRDQFQGRS S
Arabidopsis Description
PEX6Peroxisome biogenesis protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY16]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.