Factsheet for Zm00001d050303_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14976	Sorghum	cytosol	92.78	92.55
HORVU5Hr1G069560.1	Barley	cytosol	21.14	78.77
HORVU6Hr1G053620.1	Barley	cytosol	35.19	77.44
HORVU2Hr1G011690.1	Barley	cytosol	76.71	73.54
TraesCS2A01G060000.1	Wheat	cytosol	78.35	71.64
Zm00001d048409_P001	Maize	cytosol	67.47	66.29
Zm00001d027707_P001	Maize	cytosol, plasma membrane	67.59	66.17
Zm00001d014124_P001	Maize	cytosol, plasma membrane	67.72	65.97
Os08t0413000-00	Rice	mitochondrion	75.19	65.71
Zm00001d032859_P006	Maize	plasma membrane	67.22	65.56
Zm00001d032117_P001	Maize	cytosol	24.56	60.62
Zm00001d025776_P002	Maize	cytosol	28.99	40.32
Zm00001d009592_P001	Maize	cytosol	12.41	37.4
Zm00001d045163_P001	Maize	mitochondrion	7.85	35.23
Zm00001d035913_P002	Maize	cytosol, mitochondrion	31.65	34.11
Zm00001d045566_P001	Maize	cytosol, mitochondrion	31.65	32.55
Zm00001d022096_P002	Maize	mitochondrion	30.89	32.23
Zm00001d018309_P003	Maize	cytosol	16.96	31.46
Zm00001d027244_P001	Maize	cytosol	14.56	31.42
Zm00001d053649_P002	Maize	cytosol, mitochondrion	15.7	31.0
Zm00001d015788_P001	Maize	plasma membrane	15.7	31.0
Zm00001d002717_P001	Maize	mitochondrion	15.82	30.64
Zm00001d046539_P002	Maize	cytosol, mitochondrion	15.32	30.4
Zm00001d050616_P002	Maize	plastid	16.58	30.18
Zm00001d053999_P001	Maize	cytosol	15.57	29.93
Zm00001d052078_P003	Maize	cytosol	17.09	29.54
Zm00001d037481_P003	Maize	cytosol, extracellular, plasma membrane	16.08	29.53
Zm00001d053616_P002	Maize	cytosol	15.57	29.15
Zm00001d016439_P003	Maize	cytosol, extracellular, plasma membrane	15.44	28.91
Zm00001d022573_P001	Maize	cytosol, extracellular, plasma membrane	15.7	27.74
Zm00001d018409_P007	Maize	cytosol	15.7	27.68
Zm00001d028801_P001	Maize	cytosol, extracellular	15.44	27.35
Zm00001d007215_P001	Maize	cytosol	15.82	26.94
Zm00001d049140_P006	Maize	cytosol, plastid	34.18	26.87
Zm00001d015886_P002	Maize	cytosol	13.67	19.93
Zm00001d002462_P010	Maize	mitochondrion	26.71	19.85
Zm00001d049974_P004	Maize	peroxisome	22.53	15.96
Zm00001d033491_P001	Maize	cytosol, plasma membrane, plastid	4.43	13.83

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.4.2.1	Gene3D:2.40.40.20	Gene3D:3.10.330.10	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:AAA_ATPase_CDC48	ProteinID:AQK52280.1	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	InterPro:CDC48_domain_2-like_sf
InterPro:CDC4_N-term_subdom	InterPro:Cdc48_dom2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0051301	UniProt:K7UEH4
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02359	PFAM:PF02933	ScanProsite:PS00674	PANTHER:PTHR23077
PANTHER:PTHR23077:SF73	SMART:SM00382	SMART:SM01072	SMART:SM01073	SUPFAM:SSF50692	SUPFAM:SSF52540
SUPFAM:SSF54585	TIGRFAMs:TIGR01243	UniParc:UPI000221A387	EnsemblPlantsGene:Zm00001d050303	EnsemblPlants:Zm00001d050303_P001	EnsemblPlants:Zm00001d050303_T001
SEG:seg	:	:	:	:	:

Description

Cell division control protein 48 homolog D

Coordinates

chr4:-:80186398..80188770

Molecular Weight (calculated)

87338.3 Da

IEP (calculated)

5.298

GRAVY (calculated)

-0.193

Length

790 amino acids

Sequence
(BLAST)

001: MSRKMDADGK KDFSTAILER KKAPNRLLAD DGEGEVAIDN SMVALSPATA FQLEIFTGDL VLLRGKRRRE TVCYAVFDAS CPDGRVRLNR AVRGNIRVHL
101: GDIVSINRID EVPTGARVQI TPFDDTVNGI SGNLFDVYLK PYFGNDALRP LCKGDRFIVH GNMHAVEFKV VDAEPADRVV VRPETAIYCS DQPVKREEEE
201: RLDGPGYDDV GGVRKQLAQI RELVELPLRH PKLFQTLGVK PPKGILLYGP PGTGKTLLAR AIASESGAHF VVVNGPEIMS MIAGQSEANL RKVFEDAEKF
301: APSVIFMDEI DAIAPNRDKT HGEVERRVVS QLLTLMDGLR PRAQVVVIGA TNRPNSLDPA LRRFGRFDRE LDIGVPDEVG RLEILRIHTK DMPLAEDVDL
401: ERIGKDTHGF VGADLAALCS EAALQLIREK MDVIDVEEDT IDVDVLDSLC VCNEHLKHAM EVTKPSALRE RGLVEVPKVS WDDIGGLQNV KLELQETVQY
501: PVEHPEMFEM FGMSPSRGVL FYGPPGCGKT MLAKAIAKEC KANFISVKGP ELLTMWYGES ESNVRDLFDK ARSAAPCILF FDELDSIAVK RGNSVGDVGG
601: TSDRVLNQLL TEMDGINAKK TVFVIGATNR PDIIDPAMLR PGRLDQLIYI PLPDEPSRLQ IFKSCLRRSP VSRHVHLPAL ARITAGFSGA DITEICQRAC
701: KLAVRDVIQW SLKVGKAEAM RGAEIGVWHL TEALKHARRS VSDLDVMKYD FFAQRLKGGG FEDETIIAAP MGTQPLTITE IEEEDDSSLY

Best Arabidopsis Sequence Match ( AT3G01610.1 )
(BLAST)

001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE

Arabidopsis Description

CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.