Factsheet for Zm00001d035913_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87717	Sorghum	cytosol	92.5	87.48
Zm00001d045566_P001	Maize	cytosol, mitochondrion	90.72	86.59
Os06t0109400-01	Rice	cytosol	79.13	75.32
Zm00001d009592_P001	Maize	cytosol	25.92	72.52
TraesCS4A01G463300.1	Wheat	mitochondrion	75.31	70.32
TraesCS7A01G025800.1	Wheat	mitochondrion	74.9	69.94
TraesCS7D01G023600.1	Wheat	mitochondrion	74.9	69.94
TraesCS5D01G081900.1	Wheat	mitochondrion	69.44	68.51
Zm00001d022096_P002	Maize	mitochondrion	70.67	68.43
TraesCS3B01G487900.1	Wheat	mitochondrion	67.26	66.17
HORVU7Hr1G002880.2	Barley	plastid	72.03	65.92
TraesCS3D01G443600.1	Wheat	mitochondrion	66.98	65.64
CDY25624	Canola	cytosol	22.37	65.34
TraesCS3A01G450800.1	Wheat	mitochondrion	66.17	65.01
Zm00001d027244_P001	Maize	cytosol	32.06	64.21
Zm00001d002717_P001	Maize	mitochondrion	35.33	63.48
GSMUA_Achr4P03560_001	Banana	mitochondrion	64.67	60.61
Zm00001d053999_P001	Maize	cytosol	32.61	58.15
KRH44049	Soybean	nucleus	59.35	54.99
VIT_01s0010g02600.t01	Wine grape	cytosol	60.03	53.33
PGSC0003DMT400046254	Potato	cytosol	58.66	52.31
Solyc01g068330.2.1	Tomato	nucleus	58.39	52.13
CDX74308	Canola	mitochondrion	49.93	51.84
PGSC0003DMT400015455	Potato	mitochondrion	52.66	50.59
CDX91939	Canola	cytosol, mitochondrion	51.84	48.91
CDX84794	Canola	cytosol	49.11	48.45
Bra022833.1-P	Field mustard	cytosol	48.57	47.91
CDY23949	Canola	cytosol	46.93	47.45
AT3G01610.2	Thale cress	nucleus	52.66	46.51
Bra000999.1-P	Field mustard	cytosol, mitochondrion	52.8	46.46
CDY45794	Canola	nucleus	49.25	45.29
CDX89698	Canola	endoplasmic reticulum	41.88	44.17
KRH10420	Soybean	mitochondrion	28.79	42.63
Zm00001d025776_P002	Maize	cytosol	29.88	38.56
Zm00001d032117_P001	Maize	cytosol	15.69	35.94
Zm00001d045163_P001	Maize	mitochondrion	7.78	32.39
Zm00001d050303_P001	Maize	cytosol	34.11	31.65
Zm00001d027707_P001	Maize	cytosol, plasma membrane	34.24	31.1
Zm00001d048409_P001	Maize	cytosol	33.97	30.97
Zm00001d032859_P006	Maize	plasma membrane	34.11	30.86
Zm00001d014124_P001	Maize	cytosol, plasma membrane	33.97	30.7
Zm00001d053649_P002	Maize	cytosol, mitochondrion	16.37	30.0
Zm00001d015788_P001	Maize	plasma membrane	16.37	30.0
Zm00001d018309_P003	Maize	cytosol	17.05	29.34
Zm00001d046539_P002	Maize	cytosol, mitochondrion	15.83	29.15
Zm00001d016439_P003	Maize	cytosol, extracellular, plasma membrane	16.1	27.96
Zm00001d053616_P002	Maize	cytosol	16.1	27.96
Zm00001d052078_P003	Maize	cytosol	17.19	27.57
Zm00001d050616_P002	Maize	plastid	16.1	27.19
Zm00001d028801_P001	Maize	cytosol, extracellular	16.37	26.91
Zm00001d022573_P001	Maize	cytosol, extracellular, plasma membrane	16.23	26.62
Zm00001d007215_P001	Maize	cytosol	16.37	25.86
Zm00001d037481_P003	Maize	cytosol, extracellular, plasma membrane	15.14	25.81
Zm00001d018409_P007	Maize	cytosol	14.46	23.66
Zm00001d049140_P006	Maize	cytosol, plastid	30.97	22.59
Zm00001d002462_P010	Maize	mitochondrion	25.78	17.78
Zm00001d015886_P002	Maize	cytosol	12.96	17.53
Zm00001d049974_P004	Maize	peroxisome	21.96	14.44
Zm00001d033491_P001	Maize	cytosol, plasma membrane, plastid	2.73	7.91

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100279295	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6LJK2	InterPro:AAA+_ATPase
ProteinID:AQK79924.1	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0008150	GO:GO:0009987	GO:GO:0051301	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF55	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0008450677
EnsemblPlantsGene:Zm00001d035913	EnsemblPlants:Zm00001d035913_P002	EnsemblPlants:Zm00001d035913_T002	SEG:seg	:	:

Description

Cell division control protein 48 homolog C

Coordinates

chr6:+:59903519..59909972

Molecular Weight (calculated)

80724.5 Da

IEP (calculated)

8.537

GRAVY (calculated)

-0.383

Length

733 amino acids

Sequence
(BLAST)

001: MAKRPRHAGN GAGRSQLASF ERKLHDLILN GGLAGPGASA EDIANTLRIH HPKFRRLKHG PFFASVRRAL TSIPIPSSSD DDGSSASRCR HDAHTTSSAS
101: VSDAAAHPSP PAPAFDVTKS TLFSHYAAQT RKRNQNQQLE IEVTAEKPRR LITAEGGGGG DAKPEAVPAA EGFCREDKGP RFADLGGMEA VIEELMMEVV
201: VPLCHPKLPH RLGVRPVAGL LLHGPPGCGK TTLAHAIAIE TGVLFYKISA PEVVSGVSGA SEENIRGLFQ KAYRTAPSIV FIDEIDAIAS KRENLQREME
301: RRIKPGYVIV IGATNRPDAV DQALRRPGRF DREISLGVPD ENARKQILKM LTQHLRLEGE FDLFKIARAT QGFVGADLKA LVDKAGNLAM KRIIDKRRIH
401: YRREHDGNSK HDWWRQPWDE SEVEGLHITM DDFEEATKMV QPSLRREGFS SVPDVTWDDV GGLDSLRKEF DRCIIRCIKN PEDYEVFGVN MQAGFLLFGP
501: PGCGKTLIAK AVAHEAGANF IHIKGPELLN KYVGESESEV RKIFTRARTN SPCILFFDEV DALTTKRGKE GGWVVERLLN QLLIELDGAD QRQGVYVIGA
601: TNRIDVIDDA VLRPGRFGKK HYVPLPGAHE RVSILKAHAR SKPISTDVHL DALARRAECN NLTGADLASL VNEAAMAALE ERLEFIENGT SSMGSSCLIK
701: LSHFERALSK IKPSVSEQQI KYYEALSKRY SSN

Best Arabidopsis Sequence Match ( AT3G01610.2 )
(BLAST)

001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE DEIEKARTKS

Arabidopsis Description

CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.