Factsheet for TraesCS7D01G023600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G463300.1	Wheat	mitochondrion	98.47	98.47
HORVU7Hr1G002880.2	Barley	plastid	86.75	85.02
Zm00001d045566_P001	Maize	cytosol, mitochondrion	74.27	75.91
EER87717	Sorghum	cytosol	74.27	75.23
Zm00001d035913_P002	Maize	cytosol, mitochondrion	69.94	74.9
Os06t0109400-01	Rice	cytosol	71.72	73.12
TraesCS5D01G081900.1	Wheat	mitochondrion	67.9	71.74
Zm00001d009592_P001	Maize	cytosol	23.69	70.99
TraesCS3D01G443600.1	Wheat	mitochondrion	64.97	68.18
Zm00001d022096_P002	Maize	mitochondrion	65.22	67.64
CDY25624	Canola	cytosol	20.25	63.35
GSMUA_Achr4P03560_001	Banana	mitochondrion	61.66	61.89
KRH44049	Soybean	nucleus	56.69	56.26
VIT_01s0010g02600.t01	Wine grape	cytosol	55.92	53.21
CDX74308	Canola	mitochondrion	47.64	52.97
Solyc01g068330.2.1	Tomato	nucleus	54.9	52.5
PGSC0003DMT400046254	Potato	cytosol	54.78	52.31
PGSC0003DMT400015455	Potato	mitochondrion	49.68	51.11
CDX91939	Canola	cytosol, mitochondrion	49.04	49.55
CDX84794	Canola	cytosol	46.37	48.99
Bra022833.1-P	Field mustard	cytosol	45.86	48.45
AT3G01610.2	Thale cress	nucleus	50.83	48.07
CDY23949	Canola	cytosol	43.57	47.17
Bra000999.1-P	Field mustard	cytosol, mitochondrion	49.43	46.58
CDY45794	Canola	nucleus	46.88	46.17
CDX89698	Canola	endoplasmic reticulum	38.98	44.03
KRH10420	Soybean	mitochondrion	27.13	43.03
TraesCS2D01G353100.1	Wheat	cytosol	29.17	40.32
TraesCS3D01G153300.1	Wheat	cytosol	11.34	39.73
TraesCS1D01G340100.1	Wheat	cytosol	12.61	38.67
TraesCS1D01G194500.1	Wheat	cytosol	12.87	38.11
TraesCS3D01G153800.1	Wheat	cytosol	29.55	34.12
TraesCS3D01G154000.1	Wheat	cytosol	32.36	32.23
TraesCS6D01G149500.1	Wheat	cytosol	14.52	31.67
TraesCS1D01G253100.1	Wheat	cytosol	32.23	31.62
TraesCS4D01G267800.1	Wheat	cytosol	32.74	31.61
TraesCS1D01G399100.1	Wheat	cytosol	31.72	31.56
TraesCS1D01G248000.1	Wheat	cytosol	31.72	31.56
TraesCS4D01G267600.2	Wheat	cytosol	32.87	31.54
TraesCS6D01G360700.1	Wheat	cytosol	29.43	31.39
TraesCS1D01G223800.1	Wheat	cytosol	31.97	31.38
TraesCS7D01G350300.1	Wheat	cytosol	16.69	30.97
TraesCS3D01G153900.1	Wheat	cytosol	30.83	30.71
TraesCS6D01G166700.1	Wheat	cytosol, golgi	16.31	30.62
TraesCS7D01G532000.1	Wheat	cytosol	15.16	29.9
TraesCS7D01G157200.1	Wheat	cytosol	16.18	29.81
TraesCS7D01G375500.1	Wheat	cytosol	15.16	29.75
TraesCS2D01G083900.1	Wheat	golgi	15.67	29.64
TraesCS2D01G476000.1	Wheat	cytosol	15.67	29.5
TraesCS6D01G326400.1	Wheat	cytosol	15.8	29.11
TraesCS2D01G087900.1	Wheat	cytosol, golgi	16.31	28.51
TraesCS4D01G190600.1	Wheat	cytosol, golgi	16.18	28.22
TraesCS2D01G471200.1	Wheat	cytosol	15.67	27.15
TraesCS3D01G417000.1	Wheat	cytosol	14.9	26.96
TraesCS7D01G134800.1	Wheat	cytosol	14.27	26.11
TraesCS1D01G073600.1	Wheat	cytosol, plastid	30.45	23.78
TraesCS4D01G105500.2	Wheat	cytosol, plastid	30.32	23.66
TraesCS2D01G458300.3	Wheat	mitochondrion	24.08	20.26
TraesCS5D01G306600.2	Wheat	mitochondrion	21.91	15.72
TraesCS7D01G277100.1	Wheat	cytosol, peroxisome, plastid	21.4	15.41

Protein Annotations

EnsemblPlants:TraesCS7D01G023600.1	EnsemblPlantsGene:TraesCS7D01G023600	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase
PANTHER:PTHR23077	PANTHER:PTHR23077:SF55	PFAM:PF00004	ScanProsite:PS00674	SEG:seg	SMART:SM00382
SUPFAM:SSF52540	TIGR:cd00009	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7D:+:11019337..11024133

Molecular Weight (calculated)

85674.2 Da

IEP (calculated)

7.751

GRAVY (calculated)

-0.395

Length

785 amino acids

Sequence
(BLAST)

001: MAKRPRNFRA VRSNSFESYL RRVISEAGLA VPGCCADDVA AALRSRHPDL RRKQHAPLVA AVRRALLTVP LAPAPGADGD ESGSEMDSRA SSPSSRRRRH
101: DAHATASSST SYSEHDDDAR APSPPPAFDV TKAMLRTRYA SLTPRKEPAA VAAAAASQQL EIELNSEKPR RRVTTDGGGA GDPKQEAGAS EGGGGGGAKG
201: PRFSDLGGME SVIDELMMEV VVPLCHPELP LRLGVRPVAG ILLHGPPGCG KTTLAHAIAN ETGVPFYKIS APEVVSGVSG ASEENIRVLF KKAYRTAPSI
301: VFIDEIDAIA SKRENLQREM ERRIVTQLMT CMDEFHQNVG SDGGELDSQS SEKKPGYVIV IGATNRPDAV DQALRRPGRF DREISLGVPD EIGRKQILKM
401: LTQNLTLEKD QFDLFKIARA TPGFVGADLK ALVDKAGNLA MKRIIVERKK QSGGGDVNNK QDWWRHPWSE GEMDSLCITM DDFEEAATMV QPSLRREGFS
501: SVPDVTWEDV GGLDSLKKEF DRCIVRCIKH PEVYKDFGVN MQAGFLLFGP PGCGKTLIAK AVAHDAGANF IHIKGPELLN KYVGESESEV RKIFTRARIN
601: SPCILFFDEI DALTTKRGKE GGWVVERLLN QLLVELDGAD QRHGVYVIGA TNRIDVIDEA VLRPGRFGKK HFVPLPGADE RVAILKAHTE KKTLSVDVDL
701: NAIARREECN NLTGADLASL VNEAAMAALE ERCEFLAKGD SSMSTDLTNK IKLRHFEHAL SKVKPSVSEQ QRKHFDALSK KYSAN

Best Arabidopsis Sequence Match ( AT3G01610.2 )
(BLAST)

001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE DEIEKARTKS

Arabidopsis Description

CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.