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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G319300.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G56690.1 TraesCS1A01G308700.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS1A01G308800.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS1B01G319300.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS1D01G308000.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS2B01G113800.2 AT3G56800.1 11346951
AT3G56690.1 TraesCS3A01G184500.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS3A01G191900.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS3A01G335000.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS3B01G219900.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS3B01G365900.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS3D01G188600.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS3D01G194500.2 AT3G56800.1 11346951
AT3G56690.1 TraesCS3D01G328300.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS4B01G131100.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS4D01G126100.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5A01G057100.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5A01G057200.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5A01G139700.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5B01G059900.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5B01G137100.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5D01G068000.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5D01G068100.1 AT3G56800.1 11346951
AT3G56690.1 TraesCS5D01G153400.1 AT3G56800.1 11346951
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G089700.1 Wheat cytosol, plastid 94.73 97.04
TraesCS1A01G071300.1 Wheat cytosol, plastid 96.72 96.72
HORVU1Hr1G015310.16 Barley cytosol, plastid 95.42 95.42
TraesCS4D01G105500.2 Wheat cytosol, plastid 91.54 91.45
EES09632 Sorghum cytosol, plastid 70.95 72.17
Zm00001d049140_P006 Maize cytosol, plastid 70.75 70.75
GSMUA_Achr6P29120_001 Banana cytosol 38.61 64.67
PGSC0003DMT400018483 Potato cytosol 22.89 56.1
CDX72118 Canola plastid 43.28 46.08
VIT_08s0040g00910.t01 Wine grape cytosol 47.46 45.04
Solyc10g078320.1.1 Tomato nucleus 43.78 44.58
Bra007262.1-P Field mustard plastid 42.89 43.98
KRH66707 Soybean plastid 45.77 43.98
AT3G56690.1 Thale cress cytosol, plastid 44.48 43.74
CDY56774 Canola plastid 43.98 43.42
KRG95054 Soybean plastid 32.44 42.28
TraesCS2D01G353100.1 Wheat cytosol 23.08 40.85
TraesCS3D01G153300.1 Wheat cytosol 9.05 40.62
TraesCS1D01G194500.1 Wheat cytosol 10.65 40.38
TraesCS1D01G340100.1 Wheat cytosol 10.05 39.45
TraesCS3D01G153800.1 Wheat cytosol 24.38 36.03
TraesCS1D01G253100.1 Wheat cytosol 27.36 34.38
TraesCS1D01G223800.1 Wheat cytosol 27.16 34.12
TraesCS4D01G267800.1 Wheat cytosol 26.97 33.33
TraesCS4D01G267600.2 Wheat cytosol 26.77 32.89
TraesCS1D01G399100.1 Wheat cytosol 25.67 32.7
TraesCS6D01G149500.1 Wheat cytosol 11.64 32.5
TraesCS3D01G154000.1 Wheat cytosol 25.47 32.49
TraesCS1D01G248000.1 Wheat cytosol 25.47 32.45
TraesCS3D01G153900.1 Wheat cytosol 25.17 32.11
TraesCS6D01G360700.1 Wheat cytosol 23.48 32.07
TraesCS7D01G023600.1 Wheat mitochondrion 23.78 30.45
TraesCS7D01G375500.1 Wheat cytosol 12.04 30.25
TraesCS7D01G532000.1 Wheat cytosol 11.94 30.15
TraesCS5D01G081900.1 Wheat mitochondrion 21.99 29.74
TraesCS7D01G134800.1 Wheat cytosol 12.64 29.6
TraesCS7D01G157200.1 Wheat cytosol 12.54 29.58
TraesCS3D01G443600.1 Wheat mitochondrion 21.89 29.41
TraesCS6D01G326400.1 Wheat cytosol 12.34 29.11
TraesCS3D01G417000.1 Wheat cytosol 12.44 28.8
TraesCS4D01G190600.1 Wheat cytosol, golgi 12.84 28.67
TraesCS2D01G087900.1 Wheat cytosol, golgi 12.64 28.29
TraesCS2D01G476000.1 Wheat cytosol 11.64 28.06
TraesCS6D01G166700.1 Wheat cytosol, golgi 11.64 27.99
TraesCS2D01G083900.1 Wheat golgi 11.54 27.95
TraesCS7D01G350300.1 Wheat cytosol 11.74 27.9
TraesCS2D01G471200.1 Wheat cytosol 12.04 26.71
TraesCS2D01G458300.3 Wheat mitochondrion 20.2 21.76
TraesCS5D01G306600.2 Wheat mitochondrion 19.7 18.1
TraesCS7D01G277100.1 Wheat cytosol, peroxisome, plastid 19.6 18.07
Protein Annotations
EnsemblPlants:TraesCS1D01G073600.1EnsemblPlantsGene:TraesCS1D01G073600Gene3D:1.10.8.60Gene3D:3.40.50.300GO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0005524InterPro:AAA+_ATPaseInterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreInterPro:P-loop_NTPase
PANTHER:PTHR23077PANTHER:PTHR23077:SF27PFAM:PF00004ScanProsite:PS00674SEG:segSMART:SM00382
SUPFAM:SSF52540TIGR:cd00009MapMan:35.1:::
Description
No Description!
Coordinates
chr1D:-:54912188..54920788
Molecular Weight (calculated)
109071.0 Da
IEP (calculated)
5.519
GRAVY (calculated)
-0.208
Length
1005 amino acids
Sequence
(BLAST)
0001: MSSKGKKKKP SASPQPSPRT PPSRAREGTG GCILDLSSTA AAAAARYPAL VPRGGAGCFA GTVSDVVSRG GSRSGEGRLW LAEPAMASTG LRPGCLVFVS
0101: LISSSSNSLD GFPLDSLFEE CNRFFDLDVG NDLISNEAGV NFVTATVFPS REVQKNDIKL SWDLACTLGY PVVGRSLLIS PVYTSQAPKR ADSGELLRVI
0201: KCSDLYLGLV PTKVVPSSHN KSESDCHPVR NVMVMESPKR IPSTPPCRNE SHDGASNSGF SLCLDQATAK SALADDKIND LLQTSASRWL DGRHLLKGNY
0301: VPLSMCGKLS IFVVLRAETD GSALDVVHEK RNSMSNADVS GKLVETPALY LVDRTTKVHL SDLSSSKEFG SDKLGFPPEY SICADTGSED ANHDQRLGGL
0401: SEVSAKVKEM ISFSLADQIG LPRNGLHDLP RYKGLLLYGP PGTGKTSLAS SCAYDLGANL FTINGPEIIG QYHGESEQTL YDVFTSAKQA APAVIFIDEL
0501: DAIAPARKDG GEELSLRMVA TLLKLMDEIG RNDRVILIAA TNRLESIDRA LLRPGRFDQE IEIGVPSPGQ RLDILHHLLS GVHHSLTSEE VESLAFATHG
0601: FVGADLAALC NEAALSALRR YISVKESSTQ LLGDHDTNAE KTNIQEIDGL WGYEVSSLSS SLSKLTMSME DHCWTNRGDI IESSEPDDKK DELLLLVTKD
0701: DFEQAKMKVR PSAMREVMLE LPMVRWEDVG GQARIKKQLI EAIQLPQKCP DAFERLGIRP PRGLLMIGPP GCSKTLMARA VASEAKMNFL AVKGPELFSK
0801: WVGDSEKAVR SLFAKAKDNA PAILFFDEID GLAVTRGHGS NGISVADRVL SQLLQEMDGL DQKIGVTVIA ATNRPDKIDI ALLRPGRFDR LLDVQPPDEA
0901: DREDIFRIHT RKIPCSHDVN LNELARLTEG YTGADIKLVC REAAVAALDE NFDIPEVAIV HFKSAIDRVS PSDMQFYQEL AARFRRLVDD TDKATTMGIH
1001: TETAI
Best Arabidopsis Sequence Match ( AT3G56690.1 )
(BLAST)
0001: MPSKKKQSRT PSRLSNSEPP ASPRTPASST TSRDTDSINE EELRRSIEEA SAAFPCLLGK SAIIARVADV ASESIRGSKI WLSETSMVAA SLSPGSTVSV
0101: SLASPESRFS RSFPLSSIKA EYGDDSESII ADEPGNYFVL TTVFSSSKVF KDAVRISLNL CYGLGCPVSG RTVFVYPVSG PSLSDQFNGN GRSRYDDVNH
0201: LSLLACKELC LELTPFRNML QAKNAFESSY EQNGNGNSTP KTPANLQKFS SPRPKSPVSP IIEDSVFSCK QRFSSESSID LREVLSNESS KKLLQICASS
0301: WLYPCSLLYG NFVSVPILSE ICIFCVKRAD KRPSDTSNRN HAFMINQETK VYLHHTLDLA SEIQGRTFVQ GLQFDEGENV GCEISKLGGL SKEYAILRDI
0401: IDSSSIKNSL SSLGLRPTKG VLIHGPPGTG KTSLARTFAR HSGVNFFSVN GPEIISQYLG ESEKALDEVF RSASNATPAV VFIDDLDAIA PARKEGGEEL
0501: SQRMVATLLN LMDGISRTDG VVVIAATNRP DSIEPALRRP GRLDREIEIG VPSSTQRSDI LHIILRGMRH SLSNIQVEQL AMATHGFVGA DLSALCCEAA
0601: FVCLRRHLDQ SSSSSNLPLE EAPIAESSSN MSDISSDSSD SASSCITISA TTSGAQRSFS LDETVSLVAD DIQNNGNSCS EQMLRKQGEH TLSVGFEDFE
0701: NAKTKIRPSA MREVILEVPK VNWEDVGGQN EVKNQLMEAV EWPQKHQDAF KRIGTRPPSG ILMFGPPGCS KTLMARAVAS EAKLNFLAVK GPELFSKWVG
0801: ESEKAVRSLF AKARANAPSI IFFDEIDSLA SIRGKENDGV SVSDRVMSQL LVELDGLHQR VGVTVIAATN RPDKIDSALL RPGRFDRLLY VGPPNETDRE
0901: AILKIHLRKI PCSSDICLKE LASITKGYTG ADISLICREA AIAALEESLE MEEISMRHLK AAISQIEPTE ILSYKALSEK FQRLVHTDPQ REEEVTQPGN
1001: KSRSLWTPLR SVAMFLRRHI AS
Arabidopsis Description
CIP111Calmodulin-interacting protein 111 [Source:UniProtKB/Swiss-Prot;Acc:Q9LET7]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.