Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_06s0009g01910.t01 | |
| VIT_08s0040g00470.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G56690.1 | VIT_06s0009g01910.t01 | AT3G56800.1 | 11346951 |
| AT3G56690.1 | VIT_08s0040g00470.t01 | AT3G56800.1 | 11346951 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018483 | Potato | cytosol | 27.48 | 70.98 |
| Solyc10g078320.1.1 | Tomato | nucleus | 57.98 | 62.21 |
| CDX72118 | Canola | plastid | 55.05 | 61.76 |
| KRH66707 | Soybean | plastid | 60.62 | 61.38 |
| GSMUA_Achr6P29120_001 | Banana | cytosol | 34.37 | 60.67 |
| AT3G56690.1 | Thale cress | cytosol, plastid | 57.32 | 59.39 |
| KRG95054 | Soybean | plastid | 42.97 | 59.01 |
| CDY56774 | Canola | plastid | 56.28 | 58.55 |
| Bra007262.1-P | Field mustard | plastid | 54.01 | 58.37 |
| EES09632 | Sorghum | cytosol, plastid | 45.51 | 48.79 |
| Zm00001d049140_P006 | Maize | cytosol, plastid | 45.8 | 48.26 |
| TraesCS1B01G089700.1 | Wheat | cytosol, plastid | 44.38 | 47.91 |
| TraesCS4B01G108300.1 | Wheat | plastid | 45.04 | 47.7 |
| TraesCS1A01G071300.1 | Wheat | cytosol, plastid | 45.23 | 47.66 |
| HORVU1Hr1G015310.16 | Barley | cytosol, plastid | 45.14 | 47.56 |
| TraesCS1D01G073600.1 | Wheat | cytosol, plastid | 45.04 | 47.46 |
| TraesCS4A01G204700.1 | Wheat | cytosol, plastid | 44.95 | 47.32 |
| TraesCS4D01G105500.2 | Wheat | cytosol, plastid | 44.76 | 47.12 |
| HORVU4Hr1G016200.10 | Barley | cytosol, plastid | 44.57 | 46.92 |
| VIT_06s0061g00340.t01 | Wine grape | cytosol | 24.55 | 33.99 |
| VIT_08s0040g01480.t01 | Wine grape | cytosol | 25.78 | 33.87 |
| VIT_17s0000g08890.t01 | Wine grape | cytosol | 25.97 | 33.78 |
| VIT_18s0001g13090.t01 | Wine grape | cytosol | 11.9 | 31.66 |
| VIT_03s0038g04350.t01 | Wine grape | cytosol | 11.9 | 31.58 |
| VIT_01s0010g02600.t01 | Wine grape | cytosol | 23.51 | 30.18 |
| VIT_09s0002g00170.t01 | Wine grape | cytosol | 11.9 | 29.58 |
| VIT_11s0016g00230.t01 | Wine grape | cytosol | 11.71 | 29.18 |
| VIT_05s0020g01180.t01 | Wine grape | cytosol | 11.61 | 29.08 |
| VIT_14s0060g02260.t01 | Wine grape | cytosol | 11.05 | 28.89 |
| VIT_07s0005g05160.t01 | Wine grape | cytosol | 11.8 | 28.09 |
| VIT_09s0002g05800.t01 | Wine grape | cytosol | 10.95 | 27.82 |
| VIT_06s0004g08220.t01 | Wine grape | cytosol | 10.95 | 27.75 |
| VIT_04s0008g04690.t01 | Wine grape | cytosol | 10.95 | 27.62 |
| VIT_07s0104g01610.t01 | Wine grape | cytosol | 20.3 | 22.92 |
| VIT_00s0125g00170.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 19.26 | 17.99 |
Protein Annotations
| Gene3D:1.10.8.60 | EntrezGene:100256736 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | ProteinID:CCB57125 | ProteinID:CCB57125.1 | ncoils:Coil | UniProt:F6HQP4 | EMBL:FN596008 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005516 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009535 |
| GO:GO:0009536 | GO:GO:0009579 | GO:GO:0016020 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 |
| PANTHER:PTHR23077 | PANTHER:PTHR23077:SF27 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI000210967C | ArrayExpress:VIT_08s0040g00910 |
| EnsemblPlantsGene:VIT_08s0040g00910 | EnsemblPlants:VIT_08s0040g00910.t01 | RefSeq:XP_010653640.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr8:-:11900519..11919405
Molecular Weight (calculated)
115442.0 Da
IEP (calculated)
5.848
GRAVY (calculated)
-0.235
Length
1059 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPSKTKKHSK SLSKLSYSDK SESPSVSSVL TPPPDLEISE EDLLRYLDEA SSKCPSLIGK SAFIGRVTGV DPDSKGCKIW LSEPSMVAFN LAPGSTVSVS
0101: LASSKKKFSN GFPLSSLTDE STRHFQVDSG NKMPGEAGNY FALATVFPSC KVLKNGVRLS LNLYHTMGSP ASARIVFVYL IQSQSVTGFV NGSRKSHSTT
0201: INGLSLYKCK ELYLEMIPSK NGSTVNSDMQ STVQVSTETT NYQVSNGAAS SPKTPVSYQS KLISPNSNQL TSPICDDSVS SLSNPNNKIF ASFDITEVLG
0301: DETAKKLLQS CAASWLYSRS LLTGNLVTIP ILSELCTFCV RGAIKLSPDS DNHDLTDERS HGLFSRAPDS VSHVDDACVV DRETKVYLYL PSNSSSETPQ
0401: KGRPPHVELE FKNFKANVGS AVKLGGLSEE YAVLKDIIIS TSVKNTLSSM GLRTTKGVLL HGPPGTGKTS LAQLCICDAG VNLFSVNGAE IVSQYYGESE
0501: QALHEIFDSA SQAAPAVVFI DELDAIAPAR KDGGEELSHR IVATLLNLMD GISRTDGILV IAATNRPDSI EPALRRPGRL DREMEIGVPS PGQRYDILLN
0601: LLSEMENSLS DMQIQQLATV THGFVGADLA ALCNEAALVC LRRYVKFKKS CDDFHCNRTS IVHDGKIADP DDSEALEDQF SRDHPDCASS SPPDLSVSSE
0701: NLPYFGVQKT TSNRTNNIWN GVDASVRRSF IMEEECMLVV TFEDFEKARM KIRPSAMREV ILEVPRVKWE DVGGQNEVKA QLMEAVEWPQ KHQDAFKRIG
0801: TRPPTGVLLF GPPGCSKTLM ARAVASEAGL NFLAVKGPEL FSKWVGESEK AVRSLFAKAR ANAPSIIFFD EIDGLAVIRG KESDGVSVAD RVMSQLLVEL
0901: DGLHQRVDVT VIAATNRPDK IDPALLRPGR FDRLLYVGPP NESDRADIFH IHLCKIPFSS DVSIGELAFL TEGYTGADIS LICREAAIAA IEDNLDASEI
1001: TMEHLKTAIR QVQPSELQSY QELSTKFQRL VHSSDKRDES GLPLRSSKST WMPLWKSNN
0101: LASSKKKFSN GFPLSSLTDE STRHFQVDSG NKMPGEAGNY FALATVFPSC KVLKNGVRLS LNLYHTMGSP ASARIVFVYL IQSQSVTGFV NGSRKSHSTT
0201: INGLSLYKCK ELYLEMIPSK NGSTVNSDMQ STVQVSTETT NYQVSNGAAS SPKTPVSYQS KLISPNSNQL TSPICDDSVS SLSNPNNKIF ASFDITEVLG
0301: DETAKKLLQS CAASWLYSRS LLTGNLVTIP ILSELCTFCV RGAIKLSPDS DNHDLTDERS HGLFSRAPDS VSHVDDACVV DRETKVYLYL PSNSSSETPQ
0401: KGRPPHVELE FKNFKANVGS AVKLGGLSEE YAVLKDIIIS TSVKNTLSSM GLRTTKGVLL HGPPGTGKTS LAQLCICDAG VNLFSVNGAE IVSQYYGESE
0501: QALHEIFDSA SQAAPAVVFI DELDAIAPAR KDGGEELSHR IVATLLNLMD GISRTDGILV IAATNRPDSI EPALRRPGRL DREMEIGVPS PGQRYDILLN
0601: LLSEMENSLS DMQIQQLATV THGFVGADLA ALCNEAALVC LRRYVKFKKS CDDFHCNRTS IVHDGKIADP DDSEALEDQF SRDHPDCASS SPPDLSVSSE
0701: NLPYFGVQKT TSNRTNNIWN GVDASVRRSF IMEEECMLVV TFEDFEKARM KIRPSAMREV ILEVPRVKWE DVGGQNEVKA QLMEAVEWPQ KHQDAFKRIG
0801: TRPPTGVLLF GPPGCSKTLM ARAVASEAGL NFLAVKGPEL FSKWVGESEK AVRSLFAKAR ANAPSIIFFD EIDGLAVIRG KESDGVSVAD RVMSQLLVEL
0901: DGLHQRVDVT VIAATNRPDK IDPALLRPGR FDRLLYVGPP NESDRADIFH IHLCKIPFSS DVSIGELAFL TEGYTGADIS LICREAAIAA IEDNLDASEI
1001: TMEHLKTAIR QVQPSELQSY QELSTKFQRL VHSSDKRDES GLPLRSSKST WMPLWKSNN
0001: MPSKKKQSRT PSRLSNSEPP ASPRTPASST TSRDTDSINE EELRRSIEEA SAAFPCLLGK SAIIARVADV ASESIRGSKI WLSETSMVAA SLSPGSTVSV
0101: SLASPESRFS RSFPLSSIKA EYGDDSESII ADEPGNYFVL TTVFSSSKVF KDAVRISLNL CYGLGCPVSG RTVFVYPVSG PSLSDQFNGN GRSRYDDVNH
0201: LSLLACKELC LELTPFRNML QAKNAFESSY EQNGNGNSTP KTPANLQKFS SPRPKSPVSP IIEDSVFSCK QRFSSESSID LREVLSNESS KKLLQICASS
0301: WLYPCSLLYG NFVSVPILSE ICIFCVKRAD KRPSDTSNRN HAFMINQETK VYLHHTLDLA SEIQGRTFVQ GLQFDEGENV GCEISKLGGL SKEYAILRDI
0401: IDSSSIKNSL SSLGLRPTKG VLIHGPPGTG KTSLARTFAR HSGVNFFSVN GPEIISQYLG ESEKALDEVF RSASNATPAV VFIDDLDAIA PARKEGGEEL
0501: SQRMVATLLN LMDGISRTDG VVVIAATNRP DSIEPALRRP GRLDREIEIG VPSSTQRSDI LHIILRGMRH SLSNIQVEQL AMATHGFVGA DLSALCCEAA
0601: FVCLRRHLDQ SSSSSNLPLE EAPIAESSSN MSDISSDSSD SASSCITISA TTSGAQRSFS LDETVSLVAD DIQNNGNSCS EQMLRKQGEH TLSVGFEDFE
0701: NAKTKIRPSA MREVILEVPK VNWEDVGGQN EVKNQLMEAV EWPQKHQDAF KRIGTRPPSG ILMFGPPGCS KTLMARAVAS EAKLNFLAVK GPELFSKWVG
0801: ESEKAVRSLF AKARANAPSI IFFDEIDSLA SIRGKENDGV SVSDRVMSQL LVELDGLHQR VGVTVIAATN RPDKIDSALL RPGRFDRLLY VGPPNETDRE
0901: AILKIHLRKI PCSSDICLKE LASITKGYTG ADISLICREA AIAALEESLE MEEISMRHLK AAISQIEPTE ILSYKALSEK FQRLVHTDPQ REEEVTQPGN
1001: KSRSLWTPLR SVAMFLRRHI AS
0101: SLASPESRFS RSFPLSSIKA EYGDDSESII ADEPGNYFVL TTVFSSSKVF KDAVRISLNL CYGLGCPVSG RTVFVYPVSG PSLSDQFNGN GRSRYDDVNH
0201: LSLLACKELC LELTPFRNML QAKNAFESSY EQNGNGNSTP KTPANLQKFS SPRPKSPVSP IIEDSVFSCK QRFSSESSID LREVLSNESS KKLLQICASS
0301: WLYPCSLLYG NFVSVPILSE ICIFCVKRAD KRPSDTSNRN HAFMINQETK VYLHHTLDLA SEIQGRTFVQ GLQFDEGENV GCEISKLGGL SKEYAILRDI
0401: IDSSSIKNSL SSLGLRPTKG VLIHGPPGTG KTSLARTFAR HSGVNFFSVN GPEIISQYLG ESEKALDEVF RSASNATPAV VFIDDLDAIA PARKEGGEEL
0501: SQRMVATLLN LMDGISRTDG VVVIAATNRP DSIEPALRRP GRLDREIEIG VPSSTQRSDI LHIILRGMRH SLSNIQVEQL AMATHGFVGA DLSALCCEAA
0601: FVCLRRHLDQ SSSSSNLPLE EAPIAESSSN MSDISSDSSD SASSCITISA TTSGAQRSFS LDETVSLVAD DIQNNGNSCS EQMLRKQGEH TLSVGFEDFE
0701: NAKTKIRPSA MREVILEVPK VNWEDVGGQN EVKNQLMEAV EWPQKHQDAF KRIGTRPPSG ILMFGPPGCS KTLMARAVAS EAKLNFLAVK GPELFSKWVG
0801: ESEKAVRSLF AKARANAPSI IFFDEIDSLA SIRGKENDGV SVSDRVMSQL LVELDGLHQR VGVTVIAATN RPDKIDSALL RPGRFDRLLY VGPPNETDRE
0901: AILKIHLRKI PCSSDICLKE LASITKGYTG ADISLICREA AIAALEESLE MEEISMRHLK AAISQIEPTE ILSYKALSEK FQRLVHTDPQ REEEVTQPGN
1001: KSRSLWTPLR SVAMFLRRHI AS
Arabidopsis Description
CIP111Calmodulin-interacting protein 111 [Source:UniProtKB/Swiss-Prot;Acc:Q9LET7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.