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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P04520_001 Banana cytosol 95.56 95.56
GSMUA_Achr9P13230_001 Banana cytosol 95.56 95.56
HORVU6Hr1G087650.1 Barley cytosol, plasma membrane 90.12 95.05
VIT_05s0020g01180.t01 Wine grape cytosol 97.53 93.38
Bra039431.1-P Field mustard cytosol 96.54 92.22
Bra001152.1-P Field mustard cytosol 96.54 92.22
CDX74142 Canola cytosol 96.54 92.22
CDY05176 Canola cytosol 96.54 92.22
CDY27761 Canola cytosol 96.54 92.22
CDY40714 Canola cytosol 96.54 92.22
Solyc01g099760.2.1 Tomato nucleus, plastid 96.3 92.2
PGSC0003DMT400063574 Potato cytosol 96.3 92.2
Zm00001d045163_P001 Maize mitochondrion 40.0 92.05
CDY18782 Canola cytosol 96.3 91.98
Bra040214.1-P Field mustard cytosol 96.3 91.98
CDY18801 Canola cytosol 96.3 91.98
Os06t0173100-01 Rice cytosol, nucleus, plasma membrane 95.8 90.44
EER87942 Sorghum cytosol 95.8 90.23
Zm00001d037481_P003 Maize cytosol, extracellular, plasma membrane 95.8 90.23
Os02t0803700-01 Rice cytosol, nucleus, plastid 95.56 90.21
KXG31298 Sorghum cytosol 94.81 89.72
TraesCS3A01G421900.1 Wheat cytosol 94.07 87.79
TraesCS3B01G457100.1 Wheat cytosol, golgi 94.07 87.79
TraesCS3D01G417000.1 Wheat cytosol 93.83 87.56
TraesCS7B01G036400.1 Wheat cytosol 91.6 86.89
TraesCS7D01G134800.1 Wheat cytosol 91.6 86.48
Zm00001d018409_P007 Maize cytosol 92.35 83.48
VIT_07s0005g05160.t01 Wine grape cytosol 43.7 39.78
VIT_18s0001g13090.t01 Wine grape cytosol 39.01 39.7
VIT_03s0038g04350.t01 Wine grape cytosol 39.01 39.6
VIT_09s0002g05800.t01 Wine grape cytosol 40.74 39.57
VIT_04s0008g04690.t01 Wine grape cytosol 40.99 39.52
VIT_09s0002g00170.t01 Wine grape cytosol 40.0 38.03
VIT_06s0004g08220.t01 Wine grape cytosol 38.02 36.84
VIT_11s0016g00230.t01 Wine grape cytosol 38.02 36.24
VIT_06s0061g00340.t01 Wine grape cytosol 28.64 15.16
VIT_08s0040g01480.t01 Wine grape cytosol 30.12 15.14
VIT_17s0000g08890.t01 Wine grape cytosol 29.14 14.5
VIT_01s0010g02600.t01 Wine grape cytosol 25.68 12.61
VIT_07s0104g01610.t01 Wine grape cytosol 26.91 11.62
VIT_08s0040g00910.t01 Wine grape cytosol 28.89 11.05
VIT_00s0125g00170.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 24.94 8.91
Protein Annotations
Gene3D:1.10.8.60MapMan:19.2.6.2.1.5Gene3D:2.40.50.140InterPro:26S_Psome_P45-likeGene3D:3.40.50.300InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreProteinID:CBI39511ProteinID:CBI39511.3ncoils:CoilUniProt:D7U9U7
EMBL:FN596746GO:GO:0000166GO:GO:0000502GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005737GO:GO:0005829GO:GO:0005886GO:GO:0006139GO:GO:0006357GO:GO:0006950
GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0008540
GO:GO:0009056GO:GO:0009058GO:GO:0009553GO:GO:0009555GO:GO:0009987GO:GO:0010255
GO:GO:0010498GO:GO:0016020GO:GO:0016043GO:GO:0016787GO:GO:0017025GO:GO:0019538
GO:GO:0019725GO:GO:0030163GO:GO:0030433GO:GO:0031595GO:GO:0031597GO:GO:0032991
GO:GO:0036402GO:GO:0043234GO:GO:0045899GO:GO:1901800InterPro:P-loop_NTPasePFAM:PF00004
ScanProsite:PS00674InterPro:PSMC3PANTHER:PTHR23073PANTHER:PTHR23073:SF7SMART:SM00382SUPFAM:SSF52540
TIGR:TC53881TIGRFAMs:TIGR01242UniParc:UPI0001BE51C3ArrayExpress:VIT_14s0060g02260EnsemblPlantsGene:VIT_14s0060g02260EnsemblPlants:VIT_14s0060g02260.t01
unigene:Vvi.1712RefSeq:XP_002283831RefSeq:XP_002283831.2SEG:seg::
Description
No Description!
Coordinates
chr14:+:1830289..1835897
Molecular Weight (calculated)
45570.7 Da
IEP (calculated)
4.948
GRAVY (calculated)
-0.457
Length
405 amino acids
Sequence
(BLAST)
001: MSTDDIARAS RLLDNEIRIL KEELQRTNME WDSYKEKIKE NQEKIKLNKQ LPYLVGNIVE ILEMNPEDDA EEDGANIDLD SQRKGKCVVL KTSTRQTIFL
101: PVVGLVDPDK LKPGDLVGVN KDSYLILDTL PSEYDSRVKA MEVDEKPTED YNDIGGLEKQ IQELVEAIVL PMTHKERFQK LGIRPPKGVL LYGPPGTGKT
201: LMARACAAQT NATFLKLAGP QLVQMFIGDG AKLVRDAFQL AKEKSPCIIF IDEIDAIGTK RFDSEVSGDR EVQRTMLELL NQLDGFSSDD RIKVIAATNR
301: ADILDPALMR SGRLDRKIEF PHPTEEARAR ILQIHSRKMT VHPDVNFEEL ARSTDDFNGA QLKAVCVEAG MLALRRDATE VNHEDFNEGI IQVQAKKKSS
401: LNYYA
Best Arabidopsis Sequence Match ( AT3G05530.1 )
(BLAST)
001: MATPMVEDTS SFEEDQLASM STEDITRATR LLDNEIRILK EDAQRTNLEC DSYKEKIKEN QEKIKLNKQL PYLVGNIVEI LEMNPEDDAE EDGANIDLDS
101: QRKGKCVVLK TSTRQTIFLP VVGLVDPDSL KPGDLVGVNK DSYLILDTLP SEYDSRVKAM EVDEKPTEDY NDIGGLEKQI QELVEAIVLP MTHKERFEKL
201: GVRPPKGVLL YGPPGTGKTL MARACAAQTN ATFLKLAGPQ LVQMFIGDGA KLVRDAFQLA KEKAPCIIFI DEIDAIGTKR FDSEVSGDRE VQRTMLELLN
301: QLDGFSSDER IKVIAATNRA DILDPALMRS GRLDRKIEFP HPTEEARARI LQIHSRKMNV HPDVNFEELA RSTDDFNGAQ LKAVCVEAGM LALRRDATEV
401: NHEDFNEGII QVQAKKKASL NYYA
Arabidopsis Description
RPT5A26S proteasome regulatory subunit 6A homolog A [Source:UniProtKB/Swiss-Prot;Acc:Q9SEI2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.