Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G105500.2 | Wheat | cytosol, plastid | 98.21 | 98.21 |
| TraesCS4B01G108300.1 | Wheat | plastid | 97.02 | 97.6 |
| HORVU4Hr1G016200.10 | Barley | cytosol, plastid | 94.43 | 94.43 |
| TraesCS1A01G071300.1 | Wheat | cytosol, plastid | 92.15 | 92.24 |
| EES09632 | Sorghum | cytosol, plastid | 70.87 | 72.17 |
| Zm00001d049140_P006 | Maize | cytosol, plastid | 70.48 | 70.55 |
| GSMUA_Achr6P29120_001 | Banana | cytosol | 38.37 | 64.33 |
| PGSC0003DMT400018483 | Potato | cytosol | 22.76 | 55.85 |
| CDX72118 | Canola | plastid | 44.23 | 47.14 |
| Solyc10g078320.1.1 | Tomato | nucleus | 44.43 | 45.29 |
| VIT_08s0040g00910.t01 | Wine grape | cytosol | 47.32 | 44.95 |
| Bra007262.1-P | Field mustard | plastid | 43.44 | 44.59 |
| AT3G56690.1 | Thale cress | cytosol, plastid | 45.23 | 44.52 |
| CDY56774 | Canola | plastid | 44.63 | 44.11 |
| KRH66707 | Soybean | plastid | 45.73 | 43.98 |
| KRG95054 | Soybean | plastid | 32.31 | 42.15 |
| TraesCS2A01G355200.1 | Wheat | cytosol | 23.16 | 41.09 |
| TraesCS3A01G144500.1 | Wheat | cytosol | 19.09 | 36.02 |
| TraesCS1A01G222100.1 | Wheat | cytosol | 27.34 | 34.38 |
| TraesCS1A01G190300.1 | Wheat | cytosol | 26.94 | 33.54 |
| TraesCS4A01G035700.1 | Wheat | plastid | 26.94 | 33.33 |
| TraesCS4A01G035500.1 | Wheat | golgi, nucleus | 26.94 | 33.13 |
| TraesCS3A01G145100.1 | Wheat | cytosol | 25.55 | 32.57 |
| TraesCS1A01G248500.1 | Wheat | cytosol | 19.18 | 32.33 |
| TraesCS2A01G060000.1 | Wheat | cytosol | 27.53 | 32.06 |
| TraesCS6A01G162700.2 | Wheat | cytosol, golgi | 12.23 | 30.75 |
| TraesCS3A01G145000.1 | Wheat | cytosol | 21.27 | 30.75 |
| TraesCS4A01G463300.1 | Wheat | mitochondrion | 23.96 | 30.7 |
| TraesCS7A01G025800.1 | Wheat | mitochondrion | 23.86 | 30.57 |
| TraesCS7A01G156800.1 | Wheat | cytosol | 12.82 | 30.28 |
| TraesCS7A01G378600.1 | Wheat | cytosol | 11.93 | 30.0 |
| TraesCS3A01G450800.1 | Wheat | mitochondrion | 22.17 | 29.89 |
| TraesCS7A01G545700.1 | Wheat | cytosol | 11.73 | 29.65 |
| TraesCS6A01G177600.1 | Wheat | cytosol | 11.93 | 28.71 |
| TraesCS3A01G421900.1 | Wheat | cytosol | 12.23 | 28.34 |
| TraesCS4A01G115000.1 | Wheat | cytosol | 12.62 | 28.22 |
| TraesCS7A01G372600.1 | Wheat | cytosol | 11.73 | 27.9 |
| TraesCS2A01G090000.1 | Wheat | cytosol | 12.43 | 27.84 |
| TraesCS2A01G086400.1 | Wheat | cytosol | 11.43 | 27.71 |
| TraesCS2A01G475900.1 | Wheat | cytosol | 11.43 | 26.93 |
| TraesCS2A01G471400.1 | Wheat | cytosol | 12.03 | 26.54 |
| TraesCS2A01G457600.3 | Wheat | mitochondrion | 20.18 | 21.76 |
| TraesCS7A01G277100.1 | Wheat | peroxisome | 19.68 | 18.17 |
| TraesCS5A01G301500.1 | Wheat | mitochondrion | 19.09 | 17.84 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G204700.1 | EnsemblPlantsGene:TraesCS4A01G204700 | Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | InterPro:P-loop_NTPase |
| PANTHER:PTHR23077 | PANTHER:PTHR23077:SF27 | PFAM:PF00004 | ScanProsite:PS00674 | SEG:seg | SMART:SM00382 |
| SUPFAM:SSF52540 | TIGR:cd00009 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4A:+:496997901..497003812
Molecular Weight (calculated)
109065.0 Da
IEP (calculated)
5.774
GRAVY (calculated)
-0.206
Length
1006 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSKGKKKQK PSVSPQPSPR TPLSRAREGT GGCILDLPST AAAAAARYPA LVPRGGAGCF TGTVFDVVSR GGIRGGEGRL WLSGDAMASS GLRHGCLVSV
0101: SLISSSSNSL DEFPLDSLLE ECTRFFDLDV DNDLISNEAG VNFVTAKVFP SCEVQKNGIK LSWDLACTLG YPVVGRPLLI SPLYTSQAPK QTDGGEFLRV
0201: IKCSDLYLSL VPPKVAPCSH NKSESDCHPV RNVMVMESPK RIPSTSPCRN ESHHGASYSG SSLCLDQATA KSVLADDKIN DLLQTSASRW LGGRHLLKGN
0301: YVPLPMCGKL SMFVVLRAET DGSALDVVHE KNNSMSNAEV SGKLVETPAL FLVNRTTKVH LSDLSSSKEF GSDKLGLPPE YSVCADTGNE DTNPNQRLGG
0401: LSEVSAKVKE MISFSLADQI SLPRNGLHDL PRYKGILLYG PPGTGKTSLA SSCAYDLGAN LFTINGPEII SQYHGESEQA LYDAFTSAKQ AAPAVIFIDE
0501: LDAIAPARKD GGEELSLRMV ATLLKLMDEI GRNDRVILIA ATNRPESIDR ALLRPGRFDQ EIEIGVPSPG QRLDILHLLL SGVHHSLTSE EVECLAFATH
0601: GFVGADLAAL CNEAALSALR RYISVKESST QPLGDRATHA EKTNIQEIDG LLGYEISSLS SSLSKLTMST EDYSWTNRGD IIESSELNDK KDELLLLVIK
0701: DDFEQAKMKV RPSAMREVML ELPKVQWEDV GGQARIKKQL IEAIQLPQKC PDAFERLGIR PPRGLLMIGP PGCSKTLMAR AVASEAKMNF LAVKGPELFS
0801: KWVGDSEKAV RSLFAKAKDN APAILFFDEI DGLAVTRGHG NNGISVADRV LSQLLQEMDG LDQKIGVTVI AATNRPDKID IALLRPGRFD RLLDVQPPDE
0901: ADREDIFRIH TRSIPCSHDV NLNELARLTE GYTGADIKLV CREAAVAALD ENFDIPEVAT THFKSAIDRV SPSDMKFYQE LAARFRRLVD DTDKATMPGT
1001: HTEPAI
0101: SLISSSSNSL DEFPLDSLLE ECTRFFDLDV DNDLISNEAG VNFVTAKVFP SCEVQKNGIK LSWDLACTLG YPVVGRPLLI SPLYTSQAPK QTDGGEFLRV
0201: IKCSDLYLSL VPPKVAPCSH NKSESDCHPV RNVMVMESPK RIPSTSPCRN ESHHGASYSG SSLCLDQATA KSVLADDKIN DLLQTSASRW LGGRHLLKGN
0301: YVPLPMCGKL SMFVVLRAET DGSALDVVHE KNNSMSNAEV SGKLVETPAL FLVNRTTKVH LSDLSSSKEF GSDKLGLPPE YSVCADTGNE DTNPNQRLGG
0401: LSEVSAKVKE MISFSLADQI SLPRNGLHDL PRYKGILLYG PPGTGKTSLA SSCAYDLGAN LFTINGPEII SQYHGESEQA LYDAFTSAKQ AAPAVIFIDE
0501: LDAIAPARKD GGEELSLRMV ATLLKLMDEI GRNDRVILIA ATNRPESIDR ALLRPGRFDQ EIEIGVPSPG QRLDILHLLL SGVHHSLTSE EVECLAFATH
0601: GFVGADLAAL CNEAALSALR RYISVKESST QPLGDRATHA EKTNIQEIDG LLGYEISSLS SSLSKLTMST EDYSWTNRGD IIESSELNDK KDELLLLVIK
0701: DDFEQAKMKV RPSAMREVML ELPKVQWEDV GGQARIKKQL IEAIQLPQKC PDAFERLGIR PPRGLLMIGP PGCSKTLMAR AVASEAKMNF LAVKGPELFS
0801: KWVGDSEKAV RSLFAKAKDN APAILFFDEI DGLAVTRGHG NNGISVADRV LSQLLQEMDG LDQKIGVTVI AATNRPDKID IALLRPGRFD RLLDVQPPDE
0901: ADREDIFRIH TRSIPCSHDV NLNELARLTE GYTGADIKLV CREAAVAALD ENFDIPEVAT THFKSAIDRV SPSDMKFYQE LAARFRRLVD DTDKATMPGT
1001: HTEPAI
0001: MPSKKKQSRT PSRLSNSEPP ASPRTPASST TSRDTDSINE EELRRSIEEA SAAFPCLLGK SAIIARVADV ASESIRGSKI WLSETSMVAA SLSPGSTVSV
0101: SLASPESRFS RSFPLSSIKA EYGDDSESII ADEPGNYFVL TTVFSSSKVF KDAVRISLNL CYGLGCPVSG RTVFVYPVSG PSLSDQFNGN GRSRYDDVNH
0201: LSLLACKELC LELTPFRNML QAKNAFESSY EQNGNGNSTP KTPANLQKFS SPRPKSPVSP IIEDSVFSCK QRFSSESSID LREVLSNESS KKLLQICASS
0301: WLYPCSLLYG NFVSVPILSE ICIFCVKRAD KRPSDTSNRN HAFMINQETK VYLHHTLDLA SEIQGRTFVQ GLQFDEGENV GCEISKLGGL SKEYAILRDI
0401: IDSSSIKNSL SSLGLRPTKG VLIHGPPGTG KTSLARTFAR HSGVNFFSVN GPEIISQYLG ESEKALDEVF RSASNATPAV VFIDDLDAIA PARKEGGEEL
0501: SQRMVATLLN LMDGISRTDG VVVIAATNRP DSIEPALRRP GRLDREIEIG VPSSTQRSDI LHIILRGMRH SLSNIQVEQL AMATHGFVGA DLSALCCEAA
0601: FVCLRRHLDQ SSSSSNLPLE EAPIAESSSN MSDISSDSSD SASSCITISA TTSGAQRSFS LDETVSLVAD DIQNNGNSCS EQMLRKQGEH TLSVGFEDFE
0701: NAKTKIRPSA MREVILEVPK VNWEDVGGQN EVKNQLMEAV EWPQKHQDAF KRIGTRPPSG ILMFGPPGCS KTLMARAVAS EAKLNFLAVK GPELFSKWVG
0801: ESEKAVRSLF AKARANAPSI IFFDEIDSLA SIRGKENDGV SVSDRVMSQL LVELDGLHQR VGVTVIAATN RPDKIDSALL RPGRFDRLLY VGPPNETDRE
0901: AILKIHLRKI PCSSDICLKE LASITKGYTG ADISLICREA AIAALEESLE MEEISMRHLK AAISQIEPTE ILSYKALSEK FQRLVHTDPQ REEEVTQPGN
1001: KSRSLWTPLR SVAMFLRRHI AS
0101: SLASPESRFS RSFPLSSIKA EYGDDSESII ADEPGNYFVL TTVFSSSKVF KDAVRISLNL CYGLGCPVSG RTVFVYPVSG PSLSDQFNGN GRSRYDDVNH
0201: LSLLACKELC LELTPFRNML QAKNAFESSY EQNGNGNSTP KTPANLQKFS SPRPKSPVSP IIEDSVFSCK QRFSSESSID LREVLSNESS KKLLQICASS
0301: WLYPCSLLYG NFVSVPILSE ICIFCVKRAD KRPSDTSNRN HAFMINQETK VYLHHTLDLA SEIQGRTFVQ GLQFDEGENV GCEISKLGGL SKEYAILRDI
0401: IDSSSIKNSL SSLGLRPTKG VLIHGPPGTG KTSLARTFAR HSGVNFFSVN GPEIISQYLG ESEKALDEVF RSASNATPAV VFIDDLDAIA PARKEGGEEL
0501: SQRMVATLLN LMDGISRTDG VVVIAATNRP DSIEPALRRP GRLDREIEIG VPSSTQRSDI LHIILRGMRH SLSNIQVEQL AMATHGFVGA DLSALCCEAA
0601: FVCLRRHLDQ SSSSSNLPLE EAPIAESSSN MSDISSDSSD SASSCITISA TTSGAQRSFS LDETVSLVAD DIQNNGNSCS EQMLRKQGEH TLSVGFEDFE
0701: NAKTKIRPSA MREVILEVPK VNWEDVGGQN EVKNQLMEAV EWPQKHQDAF KRIGTRPPSG ILMFGPPGCS KTLMARAVAS EAKLNFLAVK GPELFSKWVG
0801: ESEKAVRSLF AKARANAPSI IFFDEIDSLA SIRGKENDGV SVSDRVMSQL LVELDGLHQR VGVTVIAATN RPDKIDSALL RPGRFDRLLY VGPPNETDRE
0901: AILKIHLRKI PCSSDICLKE LASITKGYTG ADISLICREA AIAALEESLE MEEISMRHLK AAISQIEPTE ILSYKALSEK FQRLVHTDPQ REEEVTQPGN
1001: KSRSLWTPLR SVAMFLRRHI AS
Arabidopsis Description
CIP111Calmodulin-interacting protein 111 [Source:UniProtKB/Swiss-Prot;Acc:Q9LET7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.