Factsheet for TraesCS7A01G545700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G421900.1
TraesCS3B01G457100.1
TraesCS3D01G417000.1
TraesCS7B01G036400.1
TraesCS7D01G134800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G43010.1	TraesCS3A01G421900.1	AT3G05530.1	21798944
AT5G43010.1	TraesCS3B01G457100.1	AT3G05530.1	21798944
AT5G43010.1	TraesCS3D01G417000.1	AT3G05530.1	21798944
AT5G43010.1	TraesCS7B01G036400.1	AT3G05530.1	21798944
AT5G43010.1	TraesCS7D01G134800.1	AT3G05530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G532000.1	Wheat	cytosol	96.48	96.48
TraesCS7B01G468900.1	Wheat	cytosol	95.23	95.23
HORVU7Hr1G119300.13	Barley	cytosol	90.7	89.8
KRH51796	Soybean	cytosol	76.63	76.63
Solyc01g109940.2.1	Tomato	nucleus	76.63	76.63
PGSC0003DMT400079514	Potato	cytosol	76.63	76.63
KRH61120	Soybean	endoplasmic reticulum	76.63	76.63
TraesCS7A01G378600.1	Wheat	cytosol	76.88	76.5
GSMUA_Achr4P03720_001	Banana	cytosol	76.38	76.38
GSMUA_AchrUn_...	Banana	cytosol	76.88	76.31
TraesCS6A01G162700.2	Wheat	cytosol, golgi	76.63	76.25
Bra033655.1-P	Field mustard	cytosol	76.13	75.94
CDX71534	Canola	cytosol	76.13	75.94
CDY22373	Canola	cytosol	76.13	75.94
VIT_18s0001g13090.t01	Wine grape	cytosol	75.88	75.88
KRH05868	Soybean	cytosol, nucleus	75.88	75.69
AT1G45000.1	Thale cress	cytosol	75.88	75.69
VIT_03s0038g04350.t01	Wine grape	cytosol	75.63	75.44
AT5G43010.1	Thale cress	cytosol	75.63	75.44
CDY25226	Canola	cytosol	75.63	75.44
CDY02428	Canola	cytosol, extracellular	75.63	75.44
Bra035338.1-P	Field mustard	cytosol	75.63	75.44
KRH15139	Soybean	cytosol, endoplasmic reticulum, nucleus	75.63	75.44
GSMUA_Achr7P17620_001	Banana	cytosol	76.63	74.39
Solyc10g054040.1.1	Tomato	cytosol, unclear	71.36	71.18
CDY20370	Canola	cytosol	41.71	61.71
KRH51488	Soybean	mitochondrion	61.06	57.45
CDY39032	Canola	cytosol	36.18	57.37
CDY39033	Canola	cytosol	56.03	54.93
KRH00031	Soybean	plastid	44.72	51.59
CDY20371	Canola	cytosol, plastid	54.77	49.55
TraesCS6A01G177600.1	Wheat	cytosol	41.71	39.71
TraesCS2A01G086400.1	Wheat	cytosol	40.95	39.28
TraesCS7A01G372600.1	Wheat	cytosol	41.71	39.24
TraesCS2A01G475900.1	Wheat	cytosol	40.7	37.94
TraesCS7A01G156800.1	Wheat	cytosol	39.7	37.09
TraesCS2A01G090000.1	Wheat	cytosol	39.7	35.19
TraesCS4A01G115000.1	Wheat	cytosol	39.7	35.11
Bra008198.1-P	Field mustard	cytosol	55.28	35.03
TraesCS3A01G421900.1	Wheat	cytosol	37.69	34.56
TraesCS2A01G471400.1	Wheat	cytosol	36.18	31.58
TraesCS2A01G355200.1	Wheat	cytosol	29.4	20.63
TraesCS3A01G144500.1	Wheat	cytosol	22.61	16.89
TraesCS1A01G222100.1	Wheat	cytosol	33.17	16.5
TraesCS4A01G035700.1	Wheat	plastid	33.42	16.36
TraesCS3A01G145100.1	Wheat	cytosol	32.41	16.35
TraesCS1A01G190300.1	Wheat	cytosol	32.66	16.09
TraesCS4A01G035500.1	Wheat	golgi, nucleus	32.91	16.01
TraesCS3A01G450800.1	Wheat	mitochondrion	29.9	15.95
TraesCS3A01G145000.1	Wheat	cytosol	26.38	15.09
TraesCS2A01G060000.1	Wheat	cytosol	32.41	14.93
TraesCS7A01G025800.1	Wheat	mitochondrion	28.89	14.65
TraesCS4A01G463300.1	Wheat	mitochondrion	28.89	14.65
TraesCS1A01G248500.1	Wheat	cytosol	20.1	13.4
TraesCS2A01G457600.3	Wheat	mitochondrion	27.64	11.79
TraesCS4A01G204700.1	Wheat	cytosol, plastid	29.65	11.73
TraesCS1A01G071300.1	Wheat	cytosol, plastid	29.4	11.64
TraesCS7A01G277100.1	Wheat	peroxisome	25.88	9.45
TraesCS5A01G301500.1	Wheat	mitochondrion	23.12	8.55

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.4	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163
GO:GO:0036402	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	InterPro:PSMC6	PANTHER:PTHR23073
PANTHER:PTHR23073:SF59	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR01242	EnsemblPlantsGene:TraesCS7A01G545700	EnsemblPlants:TraesCS7A01G545700.1
TIGR:cd00009	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:721703948..721707407

Molecular Weight (calculated)

44083.6 Da

IEP (calculated)

9.251

GRAVY (calculated)

-0.237

Length

398 amino acids

Sequence
(BLAST)

001: MAATADDARR AAAVAKYRAS LLAYRERQSL LTTGEENLKK ARKEREITDG HVKAFQSIGQ IVGEVLRPLG GERFIVKVRS GPRYLVNCRN KLNTESLKTG
101: TRVCLDPSTL TIVRMLPREV DPLVFNMVHE DPGNVSFSAV GGLSDQIREI RETIELPLMN PELFLRVGIK PPKGVLFYGP PGTGKTLLAR ALASNIDVNF
201: IKVVSSAVIG KYIGESARII REMFAYARNH EPCIIFMDEI DALGGRRFSE GTSADREIQR TLMELLNQLD GFDELGKVKI IMATNRPDVL DPALLRPGRL
301: DRKIEIPLPN EQARLEILKI HAAGMAKHGE INYEAAAKLA EGFNAADMRN ICTEAGMAAI RAERDYAINE DFMKGVRKLT ELKKLESSAN YKADFGSG

Best Arabidopsis Sequence Match ( AT1G45000.1 )
(BLAST)

001: MSDGDDAARR RTAAVTDYRK KLLHHKELES RVRTARENLR AAKKEFNKTE DDLKSLQSVG QIIGEVLRPL DNERLIVKAS SGPRYVVGCR SKVDKEKLTS
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE

Arabidopsis Description

RPT4B26S protease regulatory subunit S10B homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAK9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.