Factsheet for TraesCS2A01G475900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G476000.1	Wheat	cytosol	97.42	99.76
TraesCS2B01G499600.1	Wheat	cytosol	97.19	99.52
HORVU2Hr1G107280.1	Barley	cytosol	84.78	97.84
TraesCS2A01G086400.1	Wheat	cytosol	94.15	96.87
GSMUA_Achr6P12250_001	Banana	cytosol	67.92	95.71
PGSC0003DMT400006190	Potato	cytosol	73.07	95.71
Os02t0325100-01	Rice	plastid	93.44	95.23
KXG39890	Sorghum	cytosol	92.27	93.81
CDY58566	Canola	cytosol	86.18	91.09
CDY43865	Canola	cytosol	86.18	91.09
CDX88666	Canola	cytosol	86.18	91.09
CDY32995	Canola	cytosol, extracellular	85.95	90.84
Bra002662.1-P	Field mustard	cytosol	85.95	90.84
AT5G58290.1	Thale cress	cytosol	86.65	90.69
CDY32714	Canola	cytosol	85.71	90.59
CDY02806	Canola	cytosol	85.71	90.59
Bra020378.1-P	Field mustard	cytosol	85.71	90.59
Zm00001d050616_P002	Maize	plastid	92.04	90.55
Bra006775.1-P	Field mustard	cytosol	82.9	90.54
VIT_06s0004g08220.t01	Wine grape	cytosol	88.06	89.95
Solyc06g082660.2.1	Tomato	cytosol, nucleus	86.89	89.61
Solyc06g082630.2.1	Tomato	cytosol, plastid	86.65	89.37
KRH30674	Soybean	cytosol, nucleus	86.42	89.35
KRG98107	Soybean	cytosol	87.82	88.86
KRH30673	Soybean	cytosol, nucleus	87.12	87.94
Zm00001d015886_P002	Maize	cytosol	80.09	63.1
TraesCS2A01G471400.1	Wheat	cytosol	50.59	47.37
TraesCS2A01G090000.1	Wheat	cytosol	44.5	42.32
TraesCS4A01G115000.1	Wheat	cytosol	43.56	41.33
TraesCS7A01G545700.1	Wheat	cytosol	37.94	40.7
TraesCS7A01G378600.1	Wheat	cytosol	37.7	40.25
TraesCS6A01G162700.2	Wheat	cytosol, golgi	36.77	39.25
TraesCS6A01G177600.1	Wheat	cytosol	36.77	37.56
TraesCS7A01G372600.1	Wheat	cytosol	36.77	37.12
TraesCS3A01G421900.1	Wheat	cytosol	37.47	36.87
TraesCS7A01G156800.1	Wheat	cytosol	36.53	36.62
TraesCS2A01G355200.1	Wheat	cytosol	28.81	21.69
TraesCS3A01G145100.1	Wheat	cytosol	30.91	16.73
TraesCS3A01G144500.1	Wheat	cytosol	20.14	16.14
TraesCS3A01G450800.1	Wheat	mitochondrion	28.1	16.09
TraesCS1A01G190300.1	Wheat	cytosol	30.21	15.97
TraesCS1A01G222100.1	Wheat	cytosol	29.74	15.88
TraesCS4A01G035700.1	Wheat	plastid	30.21	15.87
TraesCS3A01G145000.1	Wheat	cytosol	25.76	15.8
TraesCS4A01G463300.1	Wheat	mitochondrion	29.04	15.8
TraesCS7A01G025800.1	Wheat	mitochondrion	28.81	15.67
TraesCS4A01G035500.1	Wheat	golgi, nucleus	29.98	15.65
TraesCS2A01G060000.1	Wheat	cytosol	31.38	15.51
TraesCS1A01G248500.1	Wheat	cytosol	18.27	13.07
TraesCS2A01G457600.3	Wheat	mitochondrion	25.29	11.58
TraesCS1A01G071300.1	Wheat	cytosol, plastid	26.93	11.44
TraesCS4A01G204700.1	Wheat	cytosol, plastid	26.93	11.43
TraesCS5A01G301500.1	Wheat	mitochondrion	24.59	9.76
TraesCS7A01G277100.1	Wheat	peroxisome	23.89	9.36

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.3	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0030163	GO:GO:0036402	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	InterPro:PSMC4
PANTHER:PTHR23073	PANTHER:PTHR23073:SF8	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR01242	EnsemblPlantsGene:TraesCS2A01G475900
EnsemblPlants:TraesCS2A01G475900.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:+:716176189..716179998

Molecular Weight (calculated)

47488.8 Da

IEP (calculated)

6.080

GRAVY (calculated)

-0.296

Length

427 amino acids

Sequence
(BLAST)

001: MAAAANPPAA LPSAPPPSYP ATAAHCASSS SAAAEDDDDL YGRLKSLQRH MEFVEIQEEY VKDEQKNLKR ELLRAQEEVK RIQSVPLVIG QFMEMVDGNN
101: GIVGSTTGSN YYVRILSTIN RELLKPSASV ALHRHSNALV DVLPPEADSS ISLLASSEKP NVLYSDIGGC DIQKQEIREA VELPLTHHEL YKQIGIDPPR
201: GVLLYGPPGT GKTMLAKAVA HHTTAAFIRV VGSEFVQKYL GEGPRMVRDV FRLAKENAPA IIFIDEVDAI ATARFDAQTG ADREVQRILM ELLNQMDGFD
301: QTVNVKVIMA TNRADTLDPA LLRPGRLDRK IEFPLPDRRQ KRLVFQVSFF VNAYLVCTSK MNLSDEVDLE DYVSRPDKIS AADITAICQE AGMHAVRKNR
401: YVILPKDFEK GYRTNVKKPD TDFDFYK

Best Arabidopsis Sequence Match ( AT2G20140.1 )
(BLAST)

001: MGQGPSGGLN RQGDRKPDGG EKKEKKFEPA APPARVGRKQ RKQKGPEAAA RLPTVTPSTK CKLRLLKLER IKDYLLMEEE FVANQERLKP QEEKAEEDRS
101: KVDDLRGTPM SVGNLEELID ENHAIVSSSV GPEYYVGILS FVDKDQLEPG CSILMHNKVL SVVGILQDEV DPMVSVMKVE KAPLESYADI GGLEAQIQEI
201: KEAVELPLTH PELYEDIGIK PPKGVILYGE PGTGKTLLAK AVANSTSATF LRVVGSELIQ KYLGDGPKLV RELFRVADDL SPSIVFIDEI DAVGTKRYDA
301: NSGGEREIQR TMLELLNQLD GFDSRGDVKV ILATNRIESL DPALLRPGRI DRKIEFPLPD IKTRRRIFQI HTSKMTLAED VNLEEFVMTK DEFSGADIKA
401: ICTEAGLLAL RERRMKVTHV DFKKAKEKVM FKKKEGVPEG LYM

Arabidopsis Description

RPT2BRPT2b [Source:UniProtKB/TrEMBL;Acc:A0A178VM16]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.