Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G375500.1 | Wheat | cytosol | 99.75 | 99.75 |
| TraesCS7B01G280400.1 | Wheat | cytosol, unclear | 99.75 | 99.75 |
| Os06t0607800-01 | Rice | nucleus | 94.5 | 94.26 |
| TraesCS6A01G162700.2 | Wheat | cytosol, golgi | 94.0 | 94.0 |
| EER88627 | Sorghum | cytosol | 93.0 | 93.47 |
| Zm00001d046539_P002 | Maize | cytosol, mitochondrion | 92.75 | 93.22 |
| VIT_03s0038g04350.t01 | Wine grape | cytosol | 91.75 | 91.98 |
| KRH61120 | Soybean | endoplasmic reticulum | 91.5 | 91.96 |
| KRH51796 | Soybean | cytosol | 91.5 | 91.96 |
| KRH05868 | Soybean | cytosol, nucleus | 91.25 | 91.48 |
| HORVU7Hr1G090380.3 | Barley | cytosol | 99.5 | 91.28 |
| KRH15139 | Soybean | cytosol, endoplasmic reticulum, nucleus | 91.0 | 91.23 |
| GSMUA_Achr4P03720_001 | Banana | cytosol | 90.75 | 91.21 |
| Solyc01g109940.2.1 | Tomato | nucleus | 90.5 | 90.95 |
| PGSC0003DMT400079514 | Potato | cytosol | 90.25 | 90.7 |
| VIT_18s0001g13090.t01 | Wine grape | cytosol | 90.25 | 90.7 |
| GSMUA_AchrUn_... | Banana | cytosol | 90.5 | 90.27 |
| AT1G45000.1 | Thale cress | cytosol | 90.0 | 90.23 |
| AT5G43010.1 | Thale cress | cytosol | 89.5 | 89.72 |
| CDX71534 | Canola | cytosol | 89.25 | 89.47 |
| Bra033655.1-P | Field mustard | cytosol | 89.25 | 89.47 |
| CDY22373 | Canola | cytosol | 89.0 | 89.22 |
| CDY02428 | Canola | cytosol, extracellular | 88.5 | 88.72 |
| Bra035338.1-P | Field mustard | cytosol | 88.5 | 88.72 |
| CDY25226 | Canola | cytosol | 88.5 | 88.72 |
| GSMUA_Achr7P17620_001 | Banana | cytosol | 90.5 | 88.29 |
| Solyc10g054040.1.1 | Tomato | cytosol, unclear | 82.75 | 82.96 |
| TraesCS7A01G545700.1 | Wheat | cytosol | 76.5 | 76.88 |
| CDY20370 | Canola | cytosol | 45.0 | 66.91 |
| KRH51488 | Soybean | mitochondrion | 68.0 | 64.3 |
| CDY39032 | Canola | cytosol | 38.25 | 60.96 |
| KRH00031 | Soybean | plastid | 50.5 | 58.55 |
| CDY39033 | Canola | cytosol | 58.75 | 57.88 |
| CDY20371 | Canola | cytosol, plastid | 58.25 | 52.95 |
| TraesCS6A01G177600.1 | Wheat | cytosol | 42.75 | 40.91 |
| TraesCS7A01G372600.1 | Wheat | cytosol | 42.5 | 40.19 |
| TraesCS2A01G086400.1 | Wheat | cytosol | 40.5 | 39.04 |
| TraesCS7A01G156800.1 | Wheat | cytosol | 41.25 | 38.73 |
| TraesCS3A01G421900.1 | Wheat | cytosol | 41.0 | 37.79 |
| TraesCS2A01G475900.1 | Wheat | cytosol | 40.25 | 37.7 |
| Bra008198.1-P | Field mustard | cytosol | 58.75 | 37.42 |
| TraesCS4A01G115000.1 | Wheat | cytosol | 41.25 | 36.67 |
| TraesCS2A01G090000.1 | Wheat | cytosol | 41.0 | 36.53 |
| TraesCS2A01G471400.1 | Wheat | cytosol | 36.75 | 32.24 |
| TraesCS2A01G355200.1 | Wheat | cytosol | 30.25 | 21.34 |
| TraesCS3A01G144500.1 | Wheat | cytosol | 23.25 | 17.45 |
| TraesCS1A01G222100.1 | Wheat | cytosol | 34.0 | 17.0 |
| TraesCS3A01G145100.1 | Wheat | cytosol | 33.0 | 16.73 |
| TraesCS4A01G035700.1 | Wheat | plastid | 34.0 | 16.73 |
| TraesCS3A01G450800.1 | Wheat | mitochondrion | 31.0 | 16.62 |
| TraesCS4A01G035500.1 | Wheat | golgi, nucleus | 33.75 | 16.5 |
| TraesCS1A01G190300.1 | Wheat | cytosol | 33.25 | 16.46 |
| TraesCS3A01G145000.1 | Wheat | cytosol | 27.5 | 15.8 |
| TraesCS7A01G025800.1 | Wheat | mitochondrion | 29.75 | 15.16 |
| TraesCS4A01G463300.1 | Wheat | mitochondrion | 29.75 | 15.16 |
| TraesCS2A01G060000.1 | Wheat | cytosol | 31.5 | 14.58 |
| TraesCS1A01G248500.1 | Wheat | cytosol | 20.75 | 13.9 |
| TraesCS4A01G204700.1 | Wheat | cytosol, plastid | 30.0 | 11.93 |
| TraesCS1A01G071300.1 | Wheat | cytosol, plastid | 29.75 | 11.84 |
| TraesCS2A01G457600.3 | Wheat | mitochondrion | 27.5 | 11.79 |
| TraesCS7A01G277100.1 | Wheat | peroxisome | 26.5 | 9.72 |
| TraesCS5A01G301500.1 | Wheat | mitochondrion | 24.25 | 9.01 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:19.2.6.2.1.4 | Gene3D:2.40.50.140 | InterPro:26S_Psome_P45-like | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0030163 | GO:GO:0036402 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | InterPro:PSMC6 |
| PANTHER:PTHR23073 | PANTHER:PTHR23073:SF59 | SMART:SM00382 | SUPFAM:SSF52540 | TIGRFAMs:TIGR01242 | EnsemblPlantsGene:TraesCS7A01G378600 |
| EnsemblPlants:TraesCS7A01G378600.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:554380766..554385758
Molecular Weight (calculated)
44746.0 Da
IEP (calculated)
7.540
GRAVY (calculated)
-0.372
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEADDAAAA RRRTVTTEYR NKLLNCRELE TRVRTGRENL KKAKKDYDKT EDDLKSLQSV GQIIGEVLRP LDSERFIVKA SSGPRYVVGC RSKVDKEKLT
101: AATRVVLDMT TLTIMRTLPR EVDPVVYNML HEDPGNVSYS AVGGLSDQIR ELRESIELPL MNPELFLRVG IKPPKGVLLY GPPGTGKTLL ARAIASNIDA
201: NFLKIVSSAI IDKYIGESAR LIREMFNYAR EHQPCIIFMD EIDAIGGRRF SEGTSADREI QRTLMELLNQ LDGFDELGKV KMIMATNRPD VLDPALLRPG
301: RLDRKIEIPL PNEQSRTEVL KIHAAGIAKH GEIDYEAVVK LAEGFNGADL RNVCTEAGMA AIRAERDYVI HEDFMKAVRK LNDAKKLESS AHYSADFGKD
101: AATRVVLDMT TLTIMRTLPR EVDPVVYNML HEDPGNVSYS AVGGLSDQIR ELRESIELPL MNPELFLRVG IKPPKGVLLY GPPGTGKTLL ARAIASNIDA
201: NFLKIVSSAI IDKYIGESAR LIREMFNYAR EHQPCIIFMD EIDAIGGRRF SEGTSADREI QRTLMELLNQ LDGFDELGKV KMIMATNRPD VLDPALLRPG
301: RLDRKIEIPL PNEQSRTEVL KIHAAGIAKH GEIDYEAVVK LAEGFNGADL RNVCTEAGMA AIRAERDYVI HEDFMKAVRK LNDAKKLESS AHYSADFGKD
001: MSDGDDAARR RTAAVTDYRK KLLHHKELES RVRTARENLR AAKKEFNKTE DDLKSLQSVG QIIGEVLRPL DNERLIVKAS SGPRYVVGCR SKVDKEKLTS
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
Arabidopsis Description
RPT4B26S protease regulatory subunit S10B homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAK9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.