Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G43010.1 | Thale cress | cytosol | 96.74 | 96.74 |
| VIT_18s0001g13090.t01 | Wine grape | cytosol | 93.98 | 94.22 |
| KRH51796 | Soybean | cytosol | 93.73 | 93.97 |
| KRH61120 | Soybean | endoplasmic reticulum | 93.73 | 93.97 |
| KRH05868 | Soybean | cytosol, nucleus | 93.23 | 93.23 |
| KRH15139 | Soybean | cytosol, endoplasmic reticulum, nucleus | 92.98 | 92.98 |
| GSMUA_AchrUn_... | Banana | cytosol | 92.98 | 92.52 |
| Zm00001d053649_P002 | Maize | cytosol, mitochondrion | 91.48 | 91.25 |
| EES06471 | Sorghum | cytosol | 91.48 | 91.25 |
| TraesCS6D01G149500.1 | Wheat | cytosol | 82.21 | 91.11 |
| Os02t0199900-01 | Rice | nucleus, plasma membrane | 91.23 | 91.0 |
| Zm00001d015788_P001 | Maize | plasma membrane | 90.98 | 90.75 |
| TraesCS6B01G188500.1 | Wheat | cytosol | 90.73 | 90.5 |
| TraesCS6A01G162700.2 | Wheat | cytosol, golgi | 90.73 | 90.5 |
| GSMUA_Achr7P17620_001 | Banana | cytosol | 92.98 | 90.49 |
| Os06t0607800-01 | Rice | nucleus | 90.48 | 90.02 |
| TraesCS7A01G378600.1 | Wheat | cytosol | 90.23 | 90.0 |
| TraesCS7B01G280400.1 | Wheat | cytosol, unclear | 90.23 | 90.0 |
| TraesCS7D01G375500.1 | Wheat | cytosol | 90.23 | 90.0 |
| EER88627 | Sorghum | cytosol | 89.72 | 89.95 |
| GSMUA_Achr4P03720_001 | Banana | cytosol | 89.47 | 89.7 |
| Zm00001d046539_P002 | Maize | cytosol, mitochondrion | 88.97 | 89.2 |
| HORVU6Hr1G032570.5 | Barley | cytosol | 87.97 | 85.82 |
| HORVU7Hr1G090380.3 | Barley | cytosol | 90.23 | 82.57 |
| TraesCS7D01G532000.1 | Wheat | cytosol | 76.69 | 76.88 |
| TraesCS7A01G545700.1 | Wheat | cytosol | 75.69 | 75.88 |
| TraesCS7B01G468900.1 | Wheat | cytosol | 75.44 | 75.63 |
| HORVU7Hr1G119300.13 | Barley | cytosol | 76.19 | 75.62 |
| KRH00031 | Soybean | plastid | 51.13 | 59.13 |
| AT5G20000.1 | Thale cress | cytosol | 43.61 | 41.53 |
| AT5G19990.1 | Thale cress | cytosol | 43.61 | 41.53 |
| AT1G53750.1 | Thale cress | cytosol | 41.35 | 38.73 |
| AT5G58290.1 | Thale cress | cytosol | 39.6 | 38.73 |
| AT4G29040.1 | Thale cress | cytosol | 42.11 | 37.92 |
| AT2G20140.1 | Thale cress | cytosol | 42.11 | 37.92 |
| AT1G09100.1 | Thale cress | cytosol | 39.85 | 37.59 |
| AT3G05530.1 | Thale cress | cytosol | 38.85 | 36.56 |
| AT1G53780.2 | Thale cress | cytosol | 40.6 | 26.13 |
| AT2G03670.1 | Thale cress | cytosol | 27.57 | 18.24 |
| AT3G09840.1 | Thale cress | cytosol | 34.59 | 17.06 |
| AT5G03340.1 | Thale cress | cytosol | 34.59 | 17.04 |
| AT3G53230.1 | Thale cress | cytosol | 34.09 | 16.69 |
| AT3G01610.2 | Thale cress | nucleus | 29.57 | 14.22 |
| AT3G56690.1 | Thale cress | cytosol, plastid | 30.58 | 11.94 |
| AT1G03000.1 | Thale cress | mitochondrion | 28.07 | 11.9 |
| AT5G08470.1 | Thale cress | cytosol | 29.57 | 10.44 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:19.2.6.2.1.4 | Gene3D:2.40.50.140 | InterPro:26S_Psome_P45-like | Gene3D:3.40.50.300 | EntrezGene:841065 |
| UniProt:A0A178W2Z6 | InterPro:AAA+_ATPase | ProteinID:AAF69154.1 | ProteinID:AEE32072.1 | ArrayExpress:AT1G45000 | EnsemblPlantsGene:AT1G45000 |
| RefSeq:AT1G45000 | TAIR:AT1G45000 | RefSeq:AT1G45000-TAIR-G | EnsemblPlants:AT1G45000.1 | TAIR:AT1G45000.1 | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | EMBL:AY062709 | EMBL:AY114673 | Unigene:At.27257 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008540 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0017025 | GO:GO:0019538 | GO:GO:0030163 |
| GO:GO:0030312 | GO:GO:0030433 | GO:GO:0031595 | GO:GO:0031597 | GO:GO:0036402 | GO:GO:0045899 |
| GO:GO:1901800 | RefSeq:NP_175120.1 | ProteinID:OAP11915.1 | InterPro:P-loop_NTPase | PFAM:PF00004 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00674 | PANTHER:PTHR23073 | PANTHER:PTHR23073:SF58 | UniProt:Q9MAK9 | SMART:SM00382 | SUPFAM:SSF52540 |
| TIGRFAMs:TIGR01242 | UniParc:UPI00000A8255 | SEG:seg | : | : | : |
Description
RPT4B26S protease regulatory subunit S10B homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAK9]
Coordinates
chr1:+:17009051..17011929
Molecular Weight (calculated)
44758.2 Da
IEP (calculated)
8.426
GRAVY (calculated)
-0.384
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDGDDAARR RTAAVTDYRK KLLHHKELES RVRTARENLR AAKKEFNKTE DDLKSLQSVG QIIGEVLRPL DNERLIVKAS SGPRYVVGCR SKVDKEKLTS
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.