Factsheet for AT2G20140.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G29040.1	Thale cress	cytosol	99.1	99.1
CDX92914	Canola	cytosol, extracellular	98.65	98.65
Bra011079.1-P	Field mustard	cytosol	98.42	98.42
CDY35245	Canola	cytosol	98.42	98.42
CDY06847	Canola	cytosol	98.19	98.19
CDX97472	Canola	cytosol	98.42	97.98
Bra010342.1-P	Field mustard	cytosol	98.42	97.98
CDY14224	Canola	cytosol	98.42	97.98
KRH32292	Soybean	cytosol, nucleus	96.84	96.84
KRH19693	Soybean	cytosol	96.61	96.61
KRH67524	Soybean	nucleus	96.84	96.19
VIT_07s0005g05160.t01	Wine grape	cytosol	96.61	96.18
KRG95799	Soybean	cytosol, nucleus	96.61	95.96
PGSC0003DMT400040872	Potato	cytosol	95.26	95.05
Solyc06g083620.2.1	Tomato	nucleus, plastid	95.03	94.82
PGSC0003DMT400051744	Potato	cytosol	94.81	94.59
GSMUA_Achr4P05850_001	Banana	cytosol	88.49	92.45
GSMUA_Achr4P05840_001	Banana	cytosol	87.36	91.92
EER99961	Sorghum	cytosol	92.55	91.72
Os07t0691800-01	Rice	cytosol, nucleus, plasma membrane, plastid	92.55	91.52
Zm00001d022573_P001	Maize	cytosol, extracellular, plasma membrane	92.33	91.5
Os03t0298400-01	Rice	plasma membrane	92.55	91.11
HORVU4Hr1G055060.1	Barley	cytosol	92.1	90.67
TraesCS4D01G190600.1	Wheat	cytosol, golgi	92.1	90.67
TraesCS2B01G105700.1	Wheat	cytosol	91.87	90.65
TraesCS2D01G087900.1	Wheat	cytosol, golgi	91.87	90.65
TraesCS4A01G115000.1	Wheat	cytosol	91.87	90.44
TraesCS4B01G189200.1	Wheat	cytosol	91.87	90.44
TraesCS2A01G090000.1	Wheat	cytosol	91.65	90.42
Zm00001d028801_P001	Maize	cytosol, extracellular	90.97	90.36
Zm00001d007215_P001	Maize	cytosol	92.33	88.15
HORVU2Hr1G014770.2	Barley	cytosol, plastid	86.23	86.62
CDY59958	Canola	cytosol	64.33	78.3
Bra024165.1-P	Field mustard	cytosol	56.66	77.71
HORVU3Hr1G095530.3	Barley	mitochondrion, plastid	42.21	74.5
HORVU1Hr1G091080.1	Barley	mitochondrion, plastid	41.99	74.1
AT5G58290.1	Thale cress	cytosol	43.12	46.81
AT1G09100.1	Thale cress	cytosol	41.08	43.03
AT1G45000.1	Thale cress	cytosol	37.92	42.11
AT3G05530.1	Thale cress	cytosol	40.18	41.98
AT5G43010.1	Thale cress	cytosol	37.7	41.85
AT5G20000.1	Thale cress	cytosol	38.83	41.05
AT5G19990.1	Thale cress	cytosol	38.83	41.05
AT1G53750.1	Thale cress	cytosol	37.02	38.5
AT1G53780.2	Thale cress	cytosol	38.15	27.26
AT2G03670.1	Thale cress	cytosol	26.64	19.57
AT3G09840.1	Thale cress	cytosol	29.35	16.07
AT5G03340.1	Thale cress	cytosol	29.12	15.93
AT3G53230.1	Thale cress	cytosol	29.12	15.83
AT1G03000.1	Thale cress	mitochondrion	29.35	13.82
AT3G01610.2	Thale cress	nucleus	25.51	13.61
AT3G56690.1	Thale cress	cytosol, plastid	27.99	12.13
AT5G08470.1	Thale cress	cytosol	25.73	10.09

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.2	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	EntrezGene:816533
UniProt:A0A178VM16	InterPro:AAA+_ATPase	ProteinID:AAD24384.1	ProteinID:AEC06970.1	EMBL:AF372977	ArrayExpress:AT2G20140
EnsemblPlantsGene:AT2G20140	RefSeq:AT2G20140	TAIR:AT2G20140	RefSeq:AT2G20140-TAIR-G	EnsemblPlants:AT2G20140.1	TAIR:AT2G20140.1
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EMBL:AY035072	EMBL:AY056335	EMBL:AY087584	Unigene:At.13496
GO:GO:0000003	GO:GO:0000166	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0006139	GO:GO:0006950	GO:GO:0007275
GO:GO:0007292	GO:GO:0008150	GO:GO:0008152	GO:GO:0008540	GO:GO:0009056	GO:GO:0009058
GO:GO:0009653	GO:GO:0009987	GO:GO:0010078	GO:GO:0016020	GO:GO:0016043	GO:GO:0016787
GO:GO:0017025	GO:GO:0019538	GO:GO:0030163	GO:GO:0030433	GO:GO:0031595	GO:GO:0031597
GO:GO:0036402	GO:GO:0045899	GO:GO:0048232	GO:GO:1901800	RefSeq:NP_179604.1	ProteinID:OAP07540.1
InterPro:P-loop_NTPase	PFAM:PF00004	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001170	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	ScanProsite:PS00674	PANTHER:PTHR23073	PANTHER:PTHR23073:SF61
UniProt:Q9SL67	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR01242	UniParc:UPI00000A5A1C	SEG:seg

Description

RPT2BRPT2b [Source:UniProtKB/TrEMBL;Acc:A0A178VM16]

Coordinates

chr2:+:8692567..8695111

Molecular Weight (calculated)

49349.8 Da

IEP (calculated)

5.895

GRAVY (calculated)

-0.440

Length

443 amino acids

Sequence
(BLAST)

001: MGQGPSGGLN RQGDRKPDGG EKKEKKFEPA APPARVGRKQ RKQKGPEAAA RLPTVTPSTK CKLRLLKLER IKDYLLMEEE FVANQERLKP QEEKAEEDRS
101: KVDDLRGTPM SVGNLEELID ENHAIVSSSV GPEYYVGILS FVDKDQLEPG CSILMHNKVL SVVGILQDEV DPMVSVMKVE KAPLESYADI GGLEAQIQEI
201: KEAVELPLTH PELYEDIGIK PPKGVILYGE PGTGKTLLAK AVANSTSATF LRVVGSELIQ KYLGDGPKLV RELFRVADDL SPSIVFIDEI DAVGTKRYDA
301: NSGGEREIQR TMLELLNQLD GFDSRGDVKV ILATNRIESL DPALLRPGRI DRKIEFPLPD IKTRRRIFQI HTSKMTLAED VNLEEFVMTK DEFSGADIKA
401: ICTEAGLLAL RERRMKVTHV DFKKAKEKVM FKKKEGVPEG LYM

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.