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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 6
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 21132161
endoplasmic reticulum: 27224218
nucleus: 27291164
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG89488
KRG90710
KRG90801
KRG93050
KRG95283
KRG96935
KRG97770
KRG98107
KRG99219
KRG99348
KRH00031
KRH00322
KRH03376
KRH03906
KRH04812
KRH05705
KRH05846
KRH05868
KRH05990
KRH06953
KRH11080
KRH14106
KRH15139
KRH15173
KRH15339
KRH16194
KRH17475
KRH20407
KRH21194
KRH26034
KRH30673
KRH30674
KRH31114
KRH31817
KRH36037
KRH36312
KRH38836
KRH39622
KRH41754
KRH42301
KRH43368
KRH43942
KRH44668
KRH45659
KRH45768
KRH46990
KRH49455
KRH51666
KRH51796
KRH52636
KRH53822
KRH54462
KRH55422
KRH57009
KRH57185
KRH57190
KRH57774
KRH58430
KRH59502
KRH60454
KRH61001
KRH61120
KRH61975
KRH63457
KRH64121
KRH65617
KRH68696
KRH69234
KRH69435
KRH74010
KRH74300
KRH74712
KRH75381
KRH76017

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G29040.1 KRH41754 AT1G04810.1 14623884
AT4G29040.1 KRH60454 AT1G04810.1 14623884
AT4G29040.1 KRH05990 AT1G20200.1 14623884
AT4G29040.1 KRH17475 AT1G20200.1 14623884
AT4G29040.1 KRH51666 AT1G20200.1 14623884
AT4G29040.1 KRH61001 AT1G20200.1 14623884
AT4G29040.1 KRH04812 AT1G29150.1 14623884
AT4G29040.1 KRH16194 AT1G29150.1 14623884
AT4G29040.1 KRH52636 AT1G29150.1 14623884
AT4G29040.1 KRH61975 AT1G29150.1 14623884
AT4G29040.1 KRH00031 AT1G45000.1 14623884
AT4G29040.1 KRH05868 AT1G45000.1 14623884
AT4G29040.1 KRH15139 AT1G45000.1 14623884
AT4G29040.1 KRH51796 AT1G45000.1 14623884
AT4G29040.1 KRH61120 AT1G45000.1 14623884
AT4G29040.1 KRH06953 AT1G53750.1 14623884
AT4G29040.1 KRG90710 AT1G53850.1 14623884
AT4G29040.1 KRH31817 AT1G53850.1 14623884
AT4G29040.1 KRH36037 AT1G53850.1 14623884
AT4G29040.1 KRH69234 AT1G53850.1 14623884
AT4G29040.1 KRG96935 AT1G56450.1 14623884
AT4G29040.1 KRH68696 AT1G56450.1 14623884
AT4G29040.1 KRG95283 AT1G59900.1 24846764
AT4G29040.1 KRG99219 AT1G59900.1 24846764
AT4G29040.1 KRH45768 AT1G59900.1 24846764
AT4G29040.1 KRH69435 AT1G59900.1 24846764
AT4G29040.1 KRH74712 AT1G59900.1 24846764
AT4G29040.1 KRH42301 AT1G64520.1 14623884
AT4G29040.1 KRH58430 AT1G64520.1 14623884
AT4G29040.1 KRH05990 AT1G75990.1 14623884
AT4G29040.1 KRH17475 AT1G75990.1 14623884
AT4G29040.1 KRH51666 AT1G75990.1 14623884
AT4G29040.1 KRH61001 AT1G75990.1 14623884
AT4G29040.1 KRH26034 AT2G05840.1 14623884
AT4G29040.1 KRH55422 AT2G05840.1 14623884
AT4G29040.1 KRH57774 AT2G20580.1 14623884
AT4G29040.1 KRH41754 AT2G32730.1 14623884
AT4G29040.1 KRH60454 AT2G32730.1 14623884
AT4G29040.1 KRG90710 AT3G14290.1 14623884
AT4G29040.1 KRH31817 AT3G14290.1 14623884
AT4G29040.1 KRH36037 AT3G14290.1 14623884
AT4G29040.1 KRH69234 AT3G14290.1 14623884
AT4G29040.1 KRH00322 AT3G22110.1 14623884
AT4G29040.1 KRH49455 AT3G22110.1 14623884
AT4G29040.1 KRH65617 AT3G22110.1 14623884
AT4G29040.1 KRH76017 AT3G22110.1 14623884
AT4G29040.1 KRG93050 AT3G22630.1 14623884
AT4G29040.1 KRH36312 AT3G22630.1 14623884
AT4G29040.1 KRG90801 AT3G25860.1 24846764
AT4G29040.1 KRH75381 AT3G25860.1 24846764
AT4G29040.1 KRH03376 AT3G48100.1 18642946
AT4G29040.1 KRH54462 AT3G48100.1 18642946
AT4G29040.1 KRH57009 AT3G48100.1 18642946
AT4G29040.1 KRH63457 AT3G48100.1 18642946
AT4G29040.1 KRG99348 AT3G60820.1 14623884
AT4G29040.1 KRH45659 AT3G60820.1 14623884
AT4G29040.1 KRH03906 AT4G24820.1 14623884
AT4G29040.1 KRH57185 AT4G24820.1 14623884
AT4G29040.1 KRH57190 AT4G24820.1 14623884
AT4G29040.1 KRH57774 AT4G28470.1 14623884
AT4G29040.1 KRG89488 AT5G05780.1 14623884
AT4G29040.1 KRG97770 AT5G05780.1 14623884
AT4G29040.1 KRH31114 AT5G05780.1 14623884
AT4G29040.1 KRH44668 AT5G19990.1 14623884
AT4G29040.1 KRH46990 AT5G19990.1 14623884
AT4G29040.1 KRH44668 AT5G20000.1 14623884
AT4G29040.1 KRH46990 AT5G20000.1 14623884
AT4G29040.1 KRH05705 AT5G23540.1 14623884
AT4G29040.1 KRH11080 AT5G23540.1 14623884
AT4G29040.1 KRH15339 AT5G23540.1 14623884
AT4G29040.1 KRH21194 AT5G23540.1 14623884
AT4G29040.1 KRH26034 AT5G35590.1 14623884
AT4G29040.1 KRH55422 AT5G35590.1 14623884
AT4G29040.1 KRH14106 AT5G35750.1 18642946
AT4G29040.1 KRH74010 AT5G35750.1 18642946
AT4G29040.1 KRH05846 AT5G42790.1 14623884
AT4G29040.1 KRH15173 AT5G42790.1 14623884
AT4G29040.1 KRH20407 AT5G42790.1 14623884
AT4G29040.1 KRH38836 AT5G42790.1 14623884
AT4G29040.1 KRH39622 AT5G45620.1 14623884
AT4G29040.1 KRH74300 AT5G45620.1 14623884
AT4G29040.1 KRG98107 AT5G58290.1 14623884
AT4G29040.1 KRH30673 AT5G58290.1 14623884
AT4G29040.1 KRH30674 AT5G58290.1 14623884
AT4G29040.1 KRH43368 AT5G64760.1 14623884
AT4G29040.1 KRH43942 AT5G64760.1 14623884
AT4G29040.1 KRH53822 AT5G64760.1 14623884
AT4G29040.1 KRH59502 AT5G64760.1 14623884
AT4G29040.1 KRH64121 AT5G64760.1 14623884
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG95799 Soybean cytosol, nucleus 99.78 99.78
KRH32292 Soybean cytosol, nucleus 98.65 99.32
KRH19693 Soybean cytosol 98.43 99.1
VIT_07s0005g05160.t01 Wine grape cytosol 98.21 98.43
PGSC0003DMT400040872 Potato cytosol 97.76 98.2
Solyc06g083620.2.1 Tomato nucleus, plastid 97.53 97.97
PGSC0003DMT400051744 Potato cytosol 97.09 97.52
AT4G29040.1 Thale cress cytosol 96.41 97.07
AT2G20140.1 Thale cress cytosol 96.19 96.84
CDY35245 Canola cytosol 95.29 95.94
Bra011079.1-P Field mustard cytosol 95.29 95.94
GSMUA_Achr4P05850_001 Banana cytosol 91.03 95.75
Bra010342.1-P Field mustard cytosol 95.52 95.73
CDX97472 Canola cytosol 95.52 95.73
CDY14224 Canola cytosol 95.52 95.73
CDY06847 Canola cytosol 95.07 95.71
CDX92914 Canola cytosol, extracellular 95.07 95.71
GSMUA_Achr4P05840_001 Banana cytosol 89.46 94.77
Os03t0298400-01 Rice plasma membrane 93.95 93.11
Os07t0691800-01 Rice cytosol, nucleus, plasma membrane, plastid 93.27 92.86
EER99961 Sorghum cytosol 93.05 92.84
Zm00001d022573_P001 Maize cytosol, extracellular, plasma membrane 92.83 92.62
TraesCS2D01G087900.1 Wheat cytosol, golgi 92.6 91.98
TraesCS2B01G105700.1 Wheat cytosol 92.6 91.98
TraesCS2A01G090000.1 Wheat cytosol 92.38 91.76
Zm00001d028801_P001 Maize cytosol, extracellular 91.7 91.7
HORVU4Hr1G055060.1 Barley cytosol 92.38 91.56
TraesCS4D01G190600.1 Wheat cytosol, golgi 92.38 91.56
TraesCS4A01G115000.1 Wheat cytosol 92.15 91.33
TraesCS4B01G189200.1 Wheat cytosol 92.15 91.33
Zm00001d007215_P001 Maize cytosol 92.83 89.22
HORVU2Hr1G014770.2 Barley cytosol, plastid 85.87 86.85
CDY59958 Canola cytosol 62.33 76.37
Bra024165.1-P Field mustard cytosol 54.93 75.85
HORVU3Hr1G095530.3 Barley mitochondrion, plastid 42.38 75.3
HORVU1Hr1G091080.1 Barley mitochondrion, plastid 42.15 74.9
KRH45565 Soybean endoplasmic reticulum 28.25 61.76
KRH30674 Soybean cytosol, nucleus 42.38 45.76
KRG98107 Soybean cytosol 42.6 45.02
KRH30673 Soybean cytosol, nucleus 42.38 44.68
KRH61120 Soybean endoplasmic reticulum 37.67 42.21
KRH51796 Soybean cytosol 37.67 42.21
KRG92899 Soybean cytosol, nucleus 39.91 42.08
KRH33891 Soybean endoplasmic reticulum, nucleus 39.91 42.08
KRH05868 Soybean cytosol, nucleus 37.44 41.85
KRH15139 Soybean cytosol, endoplasmic reticulum, nucleus 37.44 41.85
KRH44668 Soybean cytosol, mitochondrion, nucleus 38.79 41.39
KRH46990 Soybean nucleus 38.79 41.39
KRH68501 Soybean nucleus 38.79 40.71
KRG96790 Soybean mitochondrion 29.6 39.76
KRH06311 Soybean cytosol 37.22 38.97
KRG97280 Soybean cytosol, nucleus 37.22 38.97
KRH47728 Soybean cytosol, nucleus 37.22 38.97
KRH69005 Soybean nucleus 37.22 38.97
KRH06953 Soybean cytosol 22.87 37.78
KRH51488 Soybean mitochondrion 35.2 37.12
KRH00031 Soybean plastid 23.09 29.86
KRG99061 Soybean cytosol 12.78 28.5
KRG94277 Soybean cytosol 11.88 25.6
KRH45638 Soybean cytosol 14.13 19.63
KRH70928 Soybean cytosol 26.01 19.14
KRH25081 Soybean cytosol, endoplasmic reticulum, mitochondrion 27.13 16.71
KRH30601 Soybean cytosol 29.37 16.25
KRH26511 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 29.37 16.23
KRH22853 Soybean cytosol, endoplasmic reticulum, mitochondrion 29.37 16.23
KRH10420 Soybean mitochondrion 17.94 16.16
KRH54357 Soybean cytosol, endoplasmic reticulum, mitochondrion 29.37 16.09
KRH63585 Soybean endoplasmic reticulum 29.37 16.09
KRH67721 Soybean endoplasmic reticulum, nucleus 29.15 16.09
KRH19916 Soybean endoplasmic reticulum, mitochondrion 29.15 16.03
KRH32530 Soybean endoplasmic reticulum, mitochondrion 29.15 15.99
KRG96011 Soybean endoplasmic reticulum, mitochondrion, nucleus 28.92 15.97
KRH44049 Soybean nucleus 27.58 15.55
KRG96401 Soybean mitochondrion 26.91 13.06
KRH66707 Soybean plastid 28.03 11.95
KRH68139 Soybean cytosol 16.82 11.19
KRH50491 Soybean cytosol 24.44 9.65
KRG95054 Soybean plastid 15.47 8.95
Protein Annotations
Gene3D:1.10.8.60EntrezGene:100798835MapMan:19.2.6.2.1.2Gene3D:2.40.50.140InterPro:26S_Psome_P45-likeGene3D:3.40.50.300
UniProt:A0A0R4J302InterPro:AAA+_ATPaseEMBL:ACUP02002065InterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreEnsemblPlantsGene:GLYMA_03G170600
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0016787GO:GO:0019538GO:GO:0030163EnsemblPlants:KRH67524ProteinID:KRH67524ProteinID:KRH67524.1
InterPro:P-loop_NTPasePFAM:PF00004ScanProsite:PS00674PANTHER:PTHR23073PANTHER:PTHR23073:SF61SMART:SM00382
SUPFAM:SSF52540TIGRFAMs:TIGR01242UniParc:UPI0001D62D80SEG:seg::
Description
hypothetical protein
Coordinates
chr3:-:38542350..38547305
Molecular Weight (calculated)
49580.1 Da
IEP (calculated)
6.074
GRAVY (calculated)
-0.425
Length
446 amino acids
Sequence
(BLAST)
001: MGQGTPGGLN RQGLPGDRKP DGGDKKEKKF EPAAPPARVG RKQRKQKGPE AAARLPTVTP LSKCKLRLLK LERIKDYLLM EEEFVANQER LKPQEEKAEE
101: DRSKVDDLRG SPMSVGNLEE LIDENHAIVS SSVGPEYYVG ILSFVDKDQL EPGCAILMHN KVLSVVGLLQ DEVDPMVSVM KVEKAPLESY ADIGGLDAQI
201: QEIKEAVELP LTHPELYEDI GIKPPKGVIL YGEPGTGKTL LAKAVANSTS ATFLRVVGSE LIQKYLGDGP KLVRELFRVA DDLSPSIVFI DEIDAVGTKR
301: YDAHSGGERE IQRTMLELLN QLDGFDSRGD VKVILATNRI ESLDPALLRP GRIDRKIEFP LPDIKTRRRI FQIHTSRMTL ADDVNLEEFV MTKDEFSGAD
401: IKAICTEAGL LALRERRMKV THADFKKAKD KVMFKKKEGV PEGLYM
Best Arabidopsis Sequence Match ( AT4G29040.1 )
(BLAST)
001: MGQGPSGGLN RQGDRKPDGG DKKEKKFEPA APPARVGRKQ RKQKGPEAAA RLPTVTPSTK CKLRLLKLER IKDYLLMEEE FVANQERLKP QEEKAEEDRS
101: KVDDLRGTPM SVGNLEELID ENHAIVSSSV GPEYYVGILS FVDKDQLEPG CSILMHNKVL SVVGILQDEV DPMVSVMKVE KAPLESYADI GGLEAQIQEI
201: KEAVELPLTH PELYEDIGIK PPKGVILYGE PGTGKTLLAK AVANSTSATF LRVVGSELIQ KYLGDGPKLV RELFRVADDL SPSIVFIDEI DAVGTKRYDA
301: HSGGEREIQR TMLELLNQLD GFDSRGDVKV ILATNRIESL DPALLRPGRI DRKIEFPLPD IKTRRRIFQI HTSKMTLSED VNLEEFVMTK DEFSGADIKA
401: ICTEAGLLAL RERRMKVTHP DFKKAKEKVM FKKKEGVPEG LYM
Arabidopsis Description
RPT2ARPT2a [Source:UniProtKB/TrEMBL;Acc:A0A178V3V3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.