CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0125g00170.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	66.02	65.78
CDX69950	Canola	cytosol	57.08	59.07
Solyc04g057960.2.1	Tomato	endoplasmic reticulum, plasma membrane	58.94	59.04
CDY62119	Canola	cytosol	56.81	58.79
Bra009342.1-P	Field mustard	cytosol	57.61	58.07
AT5G08470.1	Thale cress	cytosol	58.05	58.05
GSMUA_Achr11P...	Banana	cytosol	56.73	57.18
HORVU0Hr1G013350.2	Barley	cytosol	14.34	52.6
EES15200	Sorghum	cytosol	47.61	49.18
TraesCS7B01G174800.1	Wheat	cytosol	44.34	48.64
TraesCS7D01G277100.1	Wheat	cytosol, peroxisome, plastid	46.46	48.17
TraesCS7A01G277100.1	Wheat	peroxisome	46.37	48.07
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	46.9	47.88
Zm00001d049974_P004	Maize	peroxisome	45.4	46.01
TraesCS5B01G299200.1	Wheat	mitochondrion	43.54	44.97
TraesCS5D01G306600.2	Wheat	mitochondrion	43.45	44.88
TraesCS5A01G301500.1	Wheat	mitochondrion	42.39	44.52
HORVU5Hr1G078590.8	Barley	plastid	42.92	42.92
KRG99061	Soybean	cytosol	5.84	33.0
KRG94277	Soybean	cytosol	5.84	31.88
KRH70928	Soybean	cytosol	15.22	28.38
KRH44668	Soybean	cytosol, mitochondrion, nucleus	10.09	27.27
KRH46990	Soybean	nucleus	10.09	27.27
KRH61120	Soybean	endoplasmic reticulum	9.47	26.88
KRH51796	Soybean	cytosol	9.47	26.88
KRH15139	Soybean	cytosol, endoplasmic reticulum, nucleus	9.47	26.82
KRH05868	Soybean	cytosol, nucleus	9.47	26.82
KRH26511	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	19.03	26.64
KRH22853	Soybean	cytosol, endoplasmic reticulum, mitochondrion	18.85	26.39
KRH25081	Soybean	cytosol, endoplasmic reticulum, mitochondrion	16.9	26.38
KRH67721	Soybean	endoplasmic reticulum, nucleus	18.85	26.36
KRG96011	Soybean	endoplasmic reticulum, mitochondrion, nucleus	18.85	26.36
KRH19916	Soybean	endoplasmic reticulum, mitochondrion	18.85	26.26
KRH32530	Soybean	endoplasmic reticulum, mitochondrion	18.85	26.2
KRH30601	Soybean	cytosol	18.67	26.18
KRH54357	Soybean	cytosol, endoplasmic reticulum, mitochondrion	18.76	26.04
KRH63585	Soybean	endoplasmic reticulum	18.67	25.92
KRH30674	Soybean	cytosol, nucleus	9.2	25.18
KRH44049	Soybean	nucleus	17.61	25.16
KRG98107	Soybean	cytosol	9.29	24.88
KRH30673	Soybean	cytosol, nucleus	9.2	24.59
KRH10420	Soybean	mitochondrion	10.71	24.44
KRG95799	Soybean	cytosol, nucleus	9.65	24.44
KRH67524	Soybean	nucleus	9.65	24.44
KRH32292	Soybean	cytosol, nucleus	9.56	24.38
KRH19693	Soybean	cytosol	9.56	24.38
KRH45638	Soybean	cytosol	6.9	24.3
KRH47728	Soybean	cytosol, nucleus	9.03	23.94
KRH06311	Soybean	cytosol	9.03	23.94
KRH69005	Soybean	nucleus	9.03	23.94
KRG97280	Soybean	cytosol, nucleus	9.03	23.94
KRG92899	Soybean	cytosol, nucleus	8.94	23.88
KRH33891	Soybean	endoplasmic reticulum, nucleus	8.94	23.88
KRH68501	Soybean	nucleus	8.85	23.53
KRH45565	Soybean	endoplasmic reticulum	4.07	22.55
KRG96401	Soybean	mitochondrion	17.96	22.09
KRH51488	Soybean	mitochondrion	8.23	21.99
KRG96790	Soybean	mitochondrion	6.19	21.08
KRH68139	Soybean	cytosol	12.48	21.04
KRH66707	Soybean	plastid	19.29	20.84
KRH06953	Soybean	cytosol	4.69	19.63
KRG95054	Soybean	plastid	12.57	18.42
KRH00031	Soybean	plastid	5.4	17.68

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100803882	MapMan:23.4.1.5.1.1	Gene3D:3.10.330.10	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
EMBL:ACUP02004695	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	InterPro:CDC48_domain_2-like_sf	ncoils:Coil
EnsemblPlantsGene:GLYMA_07G224000	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0005778
GO:GO:0006625	GO:GO:0006810	GO:GO:0007031	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0016787	GO:GO:0042623	UniProt:I1KMB2	EnsemblPlants:KRH50491	ProteinID:KRH50491
ProteinID:KRH50491.1	ProteinID:KRH50492.1	InterPro:P-loop_NTPase	InterPro:PEX-N_psi_beta-barrel	PFAM:PF00004	PFAM:PF09262
ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF12	InterPro:Pex1	SMART:SM00382	SUPFAM:SSF50692
SUPFAM:SSF52540	SUPFAM:SSF54585	UniParc:UPI000233866A	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:-:40108871..40123718

Molecular Weight (calculated)

124351.0 Da

IEP (calculated)

6.206

GRAVY (calculated)

-0.092

Length

1130 amino acids

Sequence
(BLAST)

0001: MELEVQVVGG IDSCFVSLPL SLIQTLQSTR SSPIPQILAL ELRSPTHPPH TWFVAWSGAT SSSSSAIEVS PQFAECVSLP NHATVQVRAA PNVPHASLVT
0101: IEPHTEDDWE ILELNADQAE AQILSQVRIV HEGMRFPLWL HGHTVITFQV ASVFPKNVVV QLMPGTEVAV APKRRKKSSD SAGDSHLDSS NKEHTAKMLL
0201: RLQDPDGLCS TSTHVKGVEL HVGLTSVAFV HPETAKKYSF NMLQLVSIVP RVTKENVNIS RSNIMKAKSG PATNEVENGY TDKTEYRQTI VQLLISESVA
0301: EGHVMVAKSL RLYLRASLHS WVYLKACDII LEKSIPSTSL FPCQFKLLKQ ENAVEKDGLE VFHGHKNHID ENLHAKPTSG VFVDTIDWSI QNEVAAALSD
0401: ESSYKAEEEA TNQSQNQRGL QSLVRLWYIM QLKAITSISG MEVSSLIIGN KTLLHFEVSC YKLRNNGKVQ LAYNSSENSG KAAEMLFLLT FGEEYLHHGK
0501: LNAYEVALGG RLNNINIGDL KLFERMKLCD PVSIHSIEER ASEDHISSNV SSLGWMEKAA DDVINRMLIL LCSASGLWFG SHNLPLPGHV LIYGPSGSGK
0601: TILARTVAKS LENREDILAH IIFVSCSKLA LEKVPVIRQE LANHVTEALN HAPSVVIFDD LDSIISTPDS EGSQLLMSVA GLTDFLIDIM DEYREKRQKS
0701: CGFGPIAFIA SIQSLEKIPQ SLSSSGRFDF HIKLPAPAAS ERRAMLKHEI QRRQLQCDDD ILLDVAVKCD GYDGYDLEIL VDRTVHAAVC RFLPSNAAIY
0801: EHESPALLRE DFSQAMLDFL PVAMRDITKS ASDDGRSGWD DVGGLVDIRN AIKEMIELPS KFPKTFAQAP LRLRSNVLLY GPPGCGKTHI VGAAAAASSL
0901: RFISVKGPEL LNKYIGASEQ AVRDIFSKAA AAAPCLLFFD EFDSIAPKRG HDNTGVTDRV VNQFLTELDG VEILTGVFVF AATSRPDLLD AALLRPGRLD
1001: RLLFCDFPSL HERLEILAVL SRKLPMANDV DLDTIANMTE GFSGADLQAL LSDAQLAAVH DVLDSVDASR PEKTPVITDA LLKFTASKAR PSVSEEEKRR
1101: LYNIYHQFLD SKRSVAAQSR DTKGKRATLA

Best Arabidopsis Sequence Match ( AT5G08470.1 )
(BLAST)

0001: MSRNRQIIIP DDVMETEAVV NTVAGVDCFV SLPRQLLHAL QSTSSSPLPP LLPVELRSGD RRWSVAWSGS SSSSSAIEIA RVFAESISLP DGTVVKVRVL
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA

Arabidopsis Description

PEX1Peroxisome biogenesis protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.