Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G306600.2 | Wheat | mitochondrion | 95.54 | 93.97 |
| TraesCS5B01G299200.1 | Wheat | mitochondrion | 94.89 | 93.33 |
| HORVU0Hr1G013350.2 | Barley | cytosol | 25.37 | 88.64 |
| HORVU5Hr1G078590.8 | Barley | plastid | 92.01 | 87.61 |
| TraesCS7A01G277100.1 | Wheat | peroxisome | 53.81 | 53.12 |
| GSMUA_Achr11P... | Banana | cytosol | 51.21 | 49.15 |
| VIT_00s0125g00170.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 47.49 | 45.06 |
| Solyc04g057960.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 46.0 | 43.88 |
| CDX69950 | Canola | cytosol | 43.96 | 43.31 |
| CDY62119 | Canola | cytosol | 43.77 | 43.13 |
| KRH50491 | Soybean | cytosol | 44.52 | 42.39 |
| Bra009342.1-P | Field mustard | cytosol | 44.15 | 42.37 |
| AT5G08470.1 | Thale cress | cytosol | 44.15 | 42.04 |
| TraesCS2A01G355200.1 | Wheat | cytosol | 14.5 | 27.51 |
| TraesCS3A01G144500.1 | Wheat | cytosol | 12.64 | 25.52 |
| TraesCS2A01G086400.1 | Wheat | cytosol | 9.67 | 25.06 |
| TraesCS6A01G177600.1 | Wheat | cytosol | 9.57 | 24.64 |
| TraesCS2A01G475900.1 | Wheat | cytosol | 9.76 | 24.59 |
| TraesCS6A01G162700.2 | Wheat | cytosol, golgi | 9.11 | 24.5 |
| TraesCS7A01G372600.1 | Wheat | cytosol | 9.57 | 24.35 |
| TraesCS7A01G378600.1 | Wheat | cytosol | 9.01 | 24.25 |
| TraesCS1A01G222100.1 | Wheat | cytosol | 17.47 | 23.5 |
| TraesCS7A01G545700.1 | Wheat | cytosol | 8.55 | 23.12 |
| TraesCS4A01G115000.1 | Wheat | cytosol | 9.57 | 22.89 |
| TraesCS3A01G145100.1 | Wheat | cytosol | 16.64 | 22.69 |
| TraesCS1A01G190300.1 | Wheat | cytosol | 16.91 | 22.52 |
| TraesCS2A01G090000.1 | Wheat | cytosol | 9.39 | 22.49 |
| TraesCS4A01G035700.1 | Wheat | plastid | 16.91 | 22.39 |
| TraesCS4A01G035500.1 | Wheat | golgi, nucleus | 17.01 | 22.37 |
| TraesCS2A01G471400.1 | Wheat | cytosol | 9.48 | 22.37 |
| TraesCS7A01G156800.1 | Wheat | cytosol | 8.74 | 22.07 |
| TraesCS3A01G450800.1 | Wheat | mitochondrion | 15.24 | 21.98 |
| TraesCS2A01G457600.3 | Wheat | mitochondrion | 18.77 | 21.65 |
| TraesCS3A01G145000.1 | Wheat | cytosol | 13.94 | 21.55 |
| TraesCS4A01G463300.1 | Wheat | mitochondrion | 15.71 | 21.53 |
| TraesCS2A01G060000.1 | Wheat | cytosol | 17.19 | 21.41 |
| TraesCS7A01G025800.1 | Wheat | mitochondrion | 15.61 | 21.4 |
| TraesCS3A01G421900.1 | Wheat | cytosol | 8.55 | 21.2 |
| TraesCS1A01G248500.1 | Wheat | cytosol | 11.71 | 21.11 |
| TraesCS4A01G204700.1 | Wheat | cytosol, plastid | 17.84 | 19.09 |
| TraesCS1A01G071300.1 | Wheat | cytosol, plastid | 17.75 | 19.0 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:23.4.1.5.1.1 | Gene3D:3.10.330.10 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | InterPro:CDC48_domain_2-like_sf | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005777 | GO:GO:0005778 | GO:GO:0006625 | GO:GO:0006810 | GO:GO:0007031 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0042623 | InterPro:P-loop_NTPase |
| InterPro:PEX-N_psi_beta-barrel | PFAM:PF00004 | PFAM:PF09262 | ScanProsite:PS00674 | PANTHER:PTHR23077 | PANTHER:PTHR23077:SF12 |
| InterPro:Pex1 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF54585 | EnsemblPlantsGene:TraesCS5A01G301500 | EnsemblPlants:TraesCS5A01G301500.1 |
| TIGR:cd00009 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:510445802..510459376
Molecular Weight (calculated)
117803.0 Da
IEP (calculated)
5.766
GRAVY (calculated)
-0.079
Length
1076 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEVVVRTVPG VRSCFVALPL PVIQALERTA AGGSLPAVLA LELHGPDRAR WRLAWAGAVS ASASPDAVEV SQQFAACISL PDNTKASLSA VSVLPKAKFV
0101: SVEPISEEDW EVLELNSELA EEAILKQVGI VYDGMKFPLW LHGDNVVEFL VISASPSNSI VQLVPGTEVA VAPKKRKGDA YSIECAPKQD LLKAQPHKKA
0201: LLRVQEAGGK YVDRFEYNGI QLGVFVTYAV QIHPDNAVKL SLGNLQLVSI TPKFSPKDST ENGKGSDQQI KGSVPGMKRN SHIVVHIILS DSVAKEHIML
0301: PQSIRCYIGT CVHSWVYVQR FSPAVNKSTP SITIHPLHFK MPERNSDDNS ALDCQEQDIY PTVGEISLAD DPPTDNNINM LRGFNDITAV ANWEESVKLK
0401: QERSFIRSWL IGQLKGLSSQ IAQPELNTVL LPSETLLHFQ VIDQTRGSPV DLIYLLTTTS DFGVNHKKIE LGMATEFDID NFEEALQKLE LNKAISLDST
0501: MERARKISDR GLSVVLSSAS LKLLSRIKCP YPGNVLVYGP PGSGKTTLCK AVARHFEEHK EILAHVVYVD CSKLATEKNK KQLQQIADYI YEAIVHSPSI
0601: VIFDDLDSLI SFSPDNLKSQ SSNSSAIVKY LIDMLDEYRD KSHGMCGYGP VAFLASAKSL KCLPQELTSS GRFDLHVQVP GLSAPARIEI LRQTIVKLHL
0701: LCTAEIISNI ASKCDGYDAY DLGILVDNTV LAASDRLLGS STVNLVEEDF LKAMRNFSPV AMRDISKFSP EISNGWEDVG GLSEVVNVIK ETIELPLKYP
0801: KFSAGAPVRL RSNILLYGPT GCGKTHVVKS VAAAYSLRFI PIKGPELMNM YIGSTEQYVR DTFAKAAAAL PCLLFFDEFE SLVPQRGKHG TQVTDRVVNQ
0901: FLTELDGVEA LTGVFVFAAT NKPREIDAAL LRPGRFDRLV FCDFPQWNER LDILRVLSKE LPLASDADLE LVASMTEGFS GADLKAILTD AGLEAAKEAV
1001: RCQPGDGSGD IPQELPLITS GTLMSVASEA RPSTSEEDRR SLREMFSQFS TSRKSSISTE RREANGQGQR VAVAES
0101: SVEPISEEDW EVLELNSELA EEAILKQVGI VYDGMKFPLW LHGDNVVEFL VISASPSNSI VQLVPGTEVA VAPKKRKGDA YSIECAPKQD LLKAQPHKKA
0201: LLRVQEAGGK YVDRFEYNGI QLGVFVTYAV QIHPDNAVKL SLGNLQLVSI TPKFSPKDST ENGKGSDQQI KGSVPGMKRN SHIVVHIILS DSVAKEHIML
0301: PQSIRCYIGT CVHSWVYVQR FSPAVNKSTP SITIHPLHFK MPERNSDDNS ALDCQEQDIY PTVGEISLAD DPPTDNNINM LRGFNDITAV ANWEESVKLK
0401: QERSFIRSWL IGQLKGLSSQ IAQPELNTVL LPSETLLHFQ VIDQTRGSPV DLIYLLTTTS DFGVNHKKIE LGMATEFDID NFEEALQKLE LNKAISLDST
0501: MERARKISDR GLSVVLSSAS LKLLSRIKCP YPGNVLVYGP PGSGKTTLCK AVARHFEEHK EILAHVVYVD CSKLATEKNK KQLQQIADYI YEAIVHSPSI
0601: VIFDDLDSLI SFSPDNLKSQ SSNSSAIVKY LIDMLDEYRD KSHGMCGYGP VAFLASAKSL KCLPQELTSS GRFDLHVQVP GLSAPARIEI LRQTIVKLHL
0701: LCTAEIISNI ASKCDGYDAY DLGILVDNTV LAASDRLLGS STVNLVEEDF LKAMRNFSPV AMRDISKFSP EISNGWEDVG GLSEVVNVIK ETIELPLKYP
0801: KFSAGAPVRL RSNILLYGPT GCGKTHVVKS VAAAYSLRFI PIKGPELMNM YIGSTEQYVR DTFAKAAAAL PCLLFFDEFE SLVPQRGKHG TQVTDRVVNQ
0901: FLTELDGVEA LTGVFVFAAT NKPREIDAAL LRPGRFDRLV FCDFPQWNER LDILRVLSKE LPLASDADLE LVASMTEGFS GADLKAILTD AGLEAAKEAV
1001: RCQPGDGSGD IPQELPLITS GTLMSVASEA RPSTSEEDRR SLREMFSQFS TSRKSSISTE RREANGQGQR VAVAES
0001: MSRNRQIIIP DDVMETEAVV NTVAGVDCFV SLPRQLLHAL QSTSSSPLPP LLPVELRSGD RRWSVAWSGS SSSSSAIEIA RVFAESISLP DGTVVKVRVL
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA
Arabidopsis Description
PEX1Peroxisome biogenesis protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.