Factsheet for TraesCS1A01G190300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G192400.1	Wheat	cytosol	96.04	96.04
HORVU0Hr1G038060.2	Barley	cytosol	62.87	96.03
HORVU1Hr1G049910.1	Barley	cytosol	94.68	93.98
TraesCS1A01G222100.1	Wheat	cytosol	91.83	92.75
TraesCS4A01G035500.1	Wheat	golgi, nucleus	91.71	90.59
TraesCS4A01G035700.1	Wheat	plastid	91.09	90.53
EER92840	Sorghum	cytosol	90.1	89.88
Zm00001d032859_P006	Maize	plasma membrane	89.85	89.63
Os03t0151800-02	Rice	cytosol, extracellular, nucleus, plasma membrane, plastid	89.73	89.62
EER94171	Sorghum	cytosol	89.73	89.51
Zm00001d014124_P001	Maize	cytosol, plasma membrane	89.6	89.27
TraesCS3A01G144500.1	Wheat	cytosol	54.83	83.11
TraesCS3A01G145100.1	Wheat	cytosol	79.83	81.75
TraesCS3A01G145000.1	Wheat	cytosol	69.93	81.18
GSMUA_Achr3P00260_001	Banana	cytosol	48.89	80.94
TraesCS1A01G248500.1	Wheat	cytosol	57.18	77.39
TraesCS2A01G060000.1	Wheat	cytosol	66.46	62.15
TraesCS2A01G355200.1	Wheat	cytosol	28.71	40.92
TraesCS7A01G378600.1	Wheat	cytosol	16.46	33.25
TraesCS6A01G162700.2	Wheat	cytosol, golgi	16.46	33.25
TraesCS3A01G450800.1	Wheat	mitochondrion	30.45	32.98
TraesCS7A01G545700.1	Wheat	cytosol	16.09	32.66
TraesCS7A01G025800.1	Wheat	mitochondrion	31.68	32.61
TraesCS4A01G463300.1	Wheat	mitochondrion	31.68	32.61
TraesCS7A01G156800.1	Wheat	cytosol	16.58	31.46
TraesCS2A01G086400.1	Wheat	cytosol	15.97	31.08
TraesCS2A01G475900.1	Wheat	cytosol	15.97	30.21
TraesCS3A01G421900.1	Wheat	cytosol	15.84	29.49
TraesCS2A01G471400.1	Wheat	cytosol	16.34	28.95
TraesCS6A01G177600.1	Wheat	cytosol	14.6	28.23
TraesCS4A01G115000.1	Wheat	cytosol	15.72	28.22
TraesCS7A01G372600.1	Wheat	cytosol	14.6	27.9
TraesCS2A01G090000.1	Wheat	cytosol	15.47	27.84
TraesCS4A01G204700.1	Wheat	cytosol, plastid	33.54	26.94
TraesCS1A01G071300.1	Wheat	cytosol, plastid	33.29	26.77
TraesCS2A01G457600.3	Wheat	mitochondrion	26.11	22.62
TraesCS5A01G301500.1	Wheat	mitochondrion	22.52	16.91
TraesCS7A01G277100.1	Wheat	peroxisome	22.4	16.61

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.4.2.1	Gene3D:2.40.40.20	Gene3D:3.10.330.10	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:AAA_ATPase_CDC48	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	InterPro:CDC48_domain_2-like_sf	InterPro:CDC4_N-term_subdom
InterPro:Cdc48_dom2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02359	PFAM:PF02933	ScanProsite:PS00674
PANTHER:PTHR23077	PANTHER:PTHR23077:SF122	SMART:SM00382	SMART:SM01072	SMART:SM01073	SUPFAM:SSF50692
SUPFAM:SSF52540	SUPFAM:SSF54585	TIGRFAMs:TIGR01243	EnsemblPlantsGene:TraesCS1A01G190300	EnsemblPlants:TraesCS1A01G190300.1	TIGR:cd00009
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:344183731..344186157

Molecular Weight (calculated)

89490.7 Da

IEP (calculated)

4.960

GRAVY (calculated)

-0.344

Length

808 amino acids

Sequence
(BLAST)

001: MAIHGEPSSS DASGKKDYSM AILERKKSPN RLVVDEATGD ENSAVALHPD TMDRLQLFCG DTVLLKGKKR RDTVCIALPD DTCDKTKIRM NKVVRKNLRV
101: RLGDVVSVHP CPDVRYGNHV HILPVDDTIE GISVSLFHAF LRPYFLEAYR PVRKGDLFHV RGGMTSVEFK VIETDPAEYC IVAPDTEIFC DGEPVTREDE
201: EKLDDVGYDD VGGVRKQMAQ IRELVELPLR HPQLFKSIGV KPPKGILLYG PPGTGKTLIA RAVANETGAF FFLINGPEIM SKLAGESESN LRKAFEEAEK
301: NAPAIIFIDE IDSIAPKREK TNGEVERRIV SQLLTLMDGL KSRAHVIVMG ATNRPNSIDP TLRRFGRFDR EIGIGVPDEV GRLEVLRIHT KNMKLAEDVE
401: LEHVSRDTHG YVGADLGALC TEAALQCIRE KMDVIDLEDD TIDAEILNSM VVTNDHFKIA LGTSNPSALR ETVVEVPNVS WEDIGGLESV KRELQETVQY
501: PVEHPEKFEK FGMSPSKGVL FYGPPGCGKT LLAKAIANEC QANFISIKGP KLLTMWFGES EANVREIFDK ARGSAPCVPF FDELDSIATQ RGNSVGDAGG
601: AADRVLNQLL TEMDGMNAKK TVFIIGATNR ADIIDPALLR PGRLDQLIYI PLPDVESRLQ IFRACLRKSP VAKDVDLNAL AKYTQGFSGA DITEICQRAC
701: KYAIRENIEK DMEKERRQKE NPEAMEEDDV DEVAEIKAAH FEESMRYARR SVSDADIRKY QAFAQTLQQS RGFGSEFRFP DQPAAGATPA TDPFASAAAA
801: AEDDDLYS

Best Arabidopsis Sequence Match ( AT3G01610.1 )
(BLAST)

001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE

Arabidopsis Description

CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.