Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G023600.1 | Wheat | mitochondrion | 98.47 | 98.47 |
| TraesCS7A01G025800.1 | Wheat | mitochondrion | 98.09 | 98.09 |
| HORVU7Hr1G002880.2 | Barley | plastid | 86.5 | 84.77 |
| Zm00001d045566_P001 | Maize | cytosol, mitochondrion | 74.52 | 76.17 |
| EER87717 | Sorghum | cytosol | 74.78 | 75.74 |
| Zm00001d035913_P002 | Maize | cytosol, mitochondrion | 70.32 | 75.31 |
| Os06t0109400-01 | Rice | cytosol | 72.1 | 73.51 |
| Zm00001d009592_P001 | Maize | cytosol | 23.69 | 70.99 |
| TraesCS3A01G450800.1 | Wheat | mitochondrion | 64.71 | 68.1 |
| Zm00001d022096_P002 | Maize | mitochondrion | 65.61 | 68.03 |
| CDY25624 | Canola | cytosol | 20.25 | 63.35 |
| GSMUA_Achr4P03560_001 | Banana | mitochondrion | 61.66 | 61.89 |
| KRH44049 | Soybean | nucleus | 56.94 | 56.51 |
| VIT_01s0010g02600.t01 | Wine grape | cytosol | 56.31 | 53.58 |
| CDX74308 | Canola | mitochondrion | 47.52 | 52.83 |
| Solyc01g068330.2.1 | Tomato | nucleus | 54.52 | 52.13 |
| PGSC0003DMT400046254 | Potato | cytosol | 54.39 | 51.95 |
| PGSC0003DMT400015455 | Potato | mitochondrion | 49.43 | 50.85 |
| CDX91939 | Canola | cytosol, mitochondrion | 48.79 | 49.29 |
| CDX84794 | Canola | cytosol | 46.5 | 49.13 |
| Bra022833.1-P | Field mustard | cytosol | 45.99 | 48.59 |
| AT3G01610.2 | Thale cress | nucleus | 50.7 | 47.95 |
| CDY23949 | Canola | cytosol | 43.69 | 47.31 |
| Bra000999.1-P | Field mustard | cytosol, mitochondrion | 49.3 | 46.46 |
| CDY45794 | Canola | nucleus | 46.88 | 46.17 |
| CDX89698 | Canola | endoplasmic reticulum | 38.98 | 44.03 |
| KRH10420 | Soybean | mitochondrion | 27.26 | 43.23 |
| TraesCS2A01G355200.1 | Wheat | cytosol | 29.43 | 40.74 |
| TraesCS3A01G144500.1 | Wheat | cytosol | 25.35 | 37.34 |
| TraesCS1A01G248500.1 | Wheat | cytosol | 24.97 | 32.83 |
| TraesCS3A01G145000.1 | Wheat | cytosol | 28.28 | 31.9 |
| TraesCS3A01G145100.1 | Wheat | cytosol | 31.97 | 31.81 |
| TraesCS4A01G035700.1 | Wheat | plastid | 32.87 | 31.73 |
| TraesCS1A01G190300.1 | Wheat | cytosol | 32.61 | 31.68 |
| TraesCS4A01G035500.1 | Wheat | golgi, nucleus | 32.99 | 31.66 |
| TraesCS1A01G222100.1 | Wheat | cytosol | 32.23 | 31.62 |
| TraesCS7A01G372600.1 | Wheat | cytosol | 16.69 | 30.97 |
| TraesCS6A01G177600.1 | Wheat | cytosol | 16.31 | 30.62 |
| TraesCS6A01G162700.2 | Wheat | cytosol, golgi | 15.29 | 30.0 |
| TraesCS7A01G156800.1 | Wheat | cytosol | 16.18 | 29.81 |
| TraesCS7A01G378600.1 | Wheat | cytosol | 15.16 | 29.75 |
| TraesCS2A01G086400.1 | Wheat | cytosol | 15.67 | 29.64 |
| TraesCS2A01G475900.1 | Wheat | cytosol | 15.8 | 29.04 |
| TraesCS7A01G545700.1 | Wheat | cytosol | 14.65 | 28.89 |
| TraesCS2A01G060000.1 | Wheat | cytosol | 31.72 | 28.82 |
| TraesCS2A01G090000.1 | Wheat | cytosol | 16.31 | 28.51 |
| TraesCS4A01G115000.1 | Wheat | cytosol | 16.05 | 28.0 |
| TraesCS3A01G421900.1 | Wheat | cytosol | 15.03 | 27.19 |
| TraesCS2A01G471400.1 | Wheat | cytosol | 15.54 | 26.75 |
| TraesCS4A01G204700.1 | Wheat | cytosol, plastid | 30.7 | 23.96 |
| TraesCS1A01G071300.1 | Wheat | cytosol, plastid | 30.32 | 23.68 |
| TraesCS2A01G457600.3 | Wheat | mitochondrion | 24.08 | 20.26 |
| TraesCS5A01G301500.1 | Wheat | mitochondrion | 21.53 | 15.71 |
| TraesCS7A01G277100.1 | Wheat | peroxisome | 21.02 | 15.14 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G463300.1 | EnsemblPlantsGene:TraesCS4A01G463300 | Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | InterPro:P-loop_NTPase |
| PANTHER:PTHR23077 | PANTHER:PTHR23077:SF55 | PFAM:PF00004 | ScanProsite:PS00674 | SEG:seg | SMART:SM00382 |
| SUPFAM:SSF52540 | TIGR:cd00009 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:727114259..727119033
Molecular Weight (calculated)
85544.0 Da
IEP (calculated)
7.751
GRAVY (calculated)
-0.395
Length
785 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKRPRNFRA VRSNSFESYL RRAISEAGLA VPGCCADDVA AALRARHPDL RRKQHAPLVA AVRRALLTVP LAPAPGADAS DSDSEMDSRA SSPSSRRRRH
101: DAHATASSST SYSEHDDDAR APSPPPAFDV TKAMLRTRYA SLTPRKEPAA VAAAAASQQL EIELNAEKPR RRVTTDGGGG GDPKQEAGAG EGGGGGGAKG
201: PRFSDLGGME SVIDELMMEV VVPLCHPELP LRLGVRPVAG ILLHGPPGCG KTTLAHAIAN ETGVPFYKIS APEVVSGVSG ASEENIRVLF KKAYRTAPSI
301: VFIDEIDAIA SKRENLQREM ERRIVTQLMT CMDEFHQNAG SDGGDLDSQS SEKKPGYVIV IGATNRPDAV DQALRRPGRF DREISLGVPD EIGRKQILKM
401: LTQNLTLEKD QFDLFKIARA TPGFVGADLK ALVDKAGNLA MKRIIVERKK QSGGGDVNNK QDWWRHPWSE GEMDSLCITM DDFEEAATMV QPSLRREGFS
501: SVPDVTWEDV GGLDSLKKEF DRCIVRCIKH PEVYKDFGVN MQAGFLLFGP PGCGKTLIAK AVAHDAGANF IHIKGPELLN KYVGESESEV RKIFTRARIN
601: SPCILFFDEI DALTTKRGKE GGWVVERLLN QLLVELDGAD QRHGVYVIGA TNRIDVIDEA VLRPGRFGKK HFVPLPGADE RVAILKAHTE KKTLSVDVDL
701: NAIARREECN NLTGADLASL VNEAAMAALE ERCEFLAKGD SSMSSDLTNK IKLRHFEHAL SKVKPSVSEQ QRKHFDALSK KYSAN
101: DAHATASSST SYSEHDDDAR APSPPPAFDV TKAMLRTRYA SLTPRKEPAA VAAAAASQQL EIELNAEKPR RRVTTDGGGG GDPKQEAGAG EGGGGGGAKG
201: PRFSDLGGME SVIDELMMEV VVPLCHPELP LRLGVRPVAG ILLHGPPGCG KTTLAHAIAN ETGVPFYKIS APEVVSGVSG ASEENIRVLF KKAYRTAPSI
301: VFIDEIDAIA SKRENLQREM ERRIVTQLMT CMDEFHQNAG SDGGDLDSQS SEKKPGYVIV IGATNRPDAV DQALRRPGRF DREISLGVPD EIGRKQILKM
401: LTQNLTLEKD QFDLFKIARA TPGFVGADLK ALVDKAGNLA MKRIIVERKK QSGGGDVNNK QDWWRHPWSE GEMDSLCITM DDFEEAATMV QPSLRREGFS
501: SVPDVTWEDV GGLDSLKKEF DRCIVRCIKH PEVYKDFGVN MQAGFLLFGP PGCGKTLIAK AVAHDAGANF IHIKGPELLN KYVGESESEV RKIFTRARIN
601: SPCILFFDEI DALTTKRGKE GGWVVERLLN QLLVELDGAD QRHGVYVIGA TNRIDVIDEA VLRPGRFGKK HFVPLPGADE RVAILKAHTE KKTLSVDVDL
701: NAIARREECN NLTGADLASL VNEAAMAALE ERCEFLAKGD SSMSSDLTNK IKLRHFEHAL SKVKPSVSEQ QRKHFDALSK KYSAN
001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE
Arabidopsis Description
CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.