Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20370 | Canola | cytosol | 36.26 | 33.83 |
| CDX74308 | Canola | mitochondrion | 88.45 | 31.44 |
| Zm00001d009592_P001 | Maize | cytosol | 32.67 | 31.3 |
| CDY39032 | Canola | cytosol | 31.08 | 31.08 |
| CDY23949 | Canola | cytosol | 82.87 | 28.69 |
| CDX91939 | Canola | cytosol, mitochondrion | 88.45 | 28.57 |
| CDX84794 | Canola | cytosol | 84.46 | 28.53 |
| CDY45794 | Canola | nucleus | 82.87 | 26.1 |
| AT3G01610.2 | Thale cress | nucleus | 78.09 | 23.61 |
| CDX89698 | Canola | endoplasmic reticulum | 64.94 | 23.45 |
| CDY39033 | Canola | cytosol | 37.05 | 22.91 |
| Zm00001d035913_P002 | Maize | cytosol, mitochondrion | 65.34 | 22.37 |
| CDY25226 | Canola | cytosol | 34.66 | 21.8 |
| CDY22373 | Canola | cytosol | 34.66 | 21.8 |
| CDX71534 | Canola | cytosol | 34.66 | 21.8 |
| CDY02428 | Canola | cytosol, extracellular | 34.66 | 21.8 |
| PGSC0003DMT400015455 | Potato | mitochondrion | 65.34 | 21.49 |
| Zm00001d045566_P001 | Maize | cytosol, mitochondrion | 64.94 | 21.22 |
| EER87717 | Sorghum | cytosol | 65.34 | 21.16 |
| GSMUA_Achr4P03560_001 | Banana | mitochondrion | 65.74 | 21.1 |
| TraesCS3B01G487900.1 | Wheat | mitochondrion | 62.15 | 20.94 |
| CDX70903 | Canola | cytosol | 34.66 | 20.91 |
| Os06t0109400-01 | Rice | cytosol | 64.14 | 20.91 |
| CDX74842 | Canola | cytosol | 34.26 | 20.87 |
| TraesCS3D01G443600.1 | Wheat | mitochondrion | 62.15 | 20.86 |
| TraesCS3A01G450800.1 | Wheat | mitochondrion | 61.75 | 20.78 |
| CDY35832 | Canola | cytosol | 34.66 | 20.76 |
| CDY20371 | Canola | cytosol, plastid | 36.26 | 20.68 |
| CDY20470 | Canola | cytosol, plasma membrane | 35.06 | 20.66 |
| VIT_01s0010g02600.t01 | Wine grape | cytosol | 67.33 | 20.48 |
| Zm00001d022096_P002 | Maize | mitochondrion | 61.75 | 20.48 |
| TraesCS5D01G081900.1 | Wheat | mitochondrion | 60.56 | 20.46 |
| CDY36602 | Canola | cytosol | 34.66 | 20.42 |
| CDY30665 | Canola | cytosol | 34.66 | 20.42 |
| CDY25685 | Canola | cytosol | 34.66 | 20.42 |
| CDY24076 | Canola | cytosol | 34.66 | 20.42 |
| CDY02494 | Canola | cytosol | 34.66 | 20.42 |
| KRH10420 | Soybean | mitochondrion | 40.24 | 20.4 |
| TraesCS7D01G023600.1 | Wheat | mitochondrion | 63.35 | 20.25 |
| TraesCS7A01G025800.1 | Wheat | mitochondrion | 63.35 | 20.25 |
| TraesCS4A01G463300.1 | Wheat | mitochondrion | 63.35 | 20.25 |
| PGSC0003DMT400046254 | Potato | cytosol | 66.14 | 20.19 |
| Solyc01g068330.2.1 | Tomato | nucleus | 65.74 | 20.1 |
| CDY58566 | Canola | cytosol | 32.27 | 20.05 |
| CDX88666 | Canola | cytosol | 32.27 | 20.05 |
| CDY02806 | Canola | cytosol | 32.27 | 20.05 |
| CDY43865 | Canola | cytosol | 32.27 | 20.05 |
| CDY32995 | Canola | cytosol, extracellular | 32.27 | 20.05 |
| CDY32714 | Canola | cytosol | 32.27 | 20.05 |
| HORVU7Hr1G002880.2 | Barley | plastid | 62.95 | 19.73 |
| CDY30663 | Canola | cytosol | 33.47 | 19.44 |
| CDY08201 | Canola | cytosol | 26.69 | 18.87 |
| CDY35245 | Canola | cytosol | 32.67 | 18.51 |
| CDY06847 | Canola | cytosol | 32.67 | 18.51 |
| CDX92914 | Canola | cytosol, extracellular | 32.67 | 18.51 |
| CDX97472 | Canola | cytosol | 32.67 | 18.43 |
| CDY14224 | Canola | cytosol | 32.67 | 18.43 |
| CDY05176 | Canola | cytosol | 29.88 | 17.69 |
| CDY40714 | Canola | cytosol | 29.88 | 17.69 |
| CDY27761 | Canola | cytosol | 29.88 | 17.69 |
| CDY18801 | Canola | cytosol | 29.88 | 17.69 |
| CDY18782 | Canola | cytosol | 29.88 | 17.69 |
| CDX74142 | Canola | cytosol | 29.88 | 17.69 |
| CDY59958 | Canola | cytosol | 25.1 | 17.31 |
| CDY04161 | Canola | cytosol | 39.84 | 16.58 |
| CDY41581 | Canola | cytosol | 47.41 | 14.73 |
| CDY54618 | Canola | cytosol | 47.41 | 14.73 |
| CDX73996 | Canola | cytosol | 46.61 | 14.46 |
| CDY07941 | Canola | cytosol | 46.61 | 14.46 |
| CDY22207 | Canola | cytosol | 46.61 | 14.44 |
| CDY41316 | Canola | cytosol, extracellular | 46.61 | 14.44 |
| CDY13308 | Canola | cytosol | 46.61 | 14.44 |
| CDY11249 | Canola | cytosol | 45.82 | 14.41 |
| CDX80862 | Canola | cytosol, plastid | 46.22 | 14.34 |
| CDX88865 | Canola | cytosol, extracellular | 34.66 | 13.83 |
| CDY33111 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 39.04 | 13.69 |
| CDX67563 | Canola | cytosol | 46.22 | 13.2 |
| CDX89923 | Canola | cytosol | 39.44 | 12.96 |
| CDX73571 | Canola | cytosol | 36.65 | 12.38 |
| CDX78154 | Canola | cytosol | 36.65 | 12.37 |
| CDY42324 | Canola | cytosol, extracellular | 34.66 | 12.13 |
| CDY44958 | Canola | cytosol, plasma membrane | 34.66 | 12.07 |
| CDX72118 | Canola | plastid | 43.03 | 11.44 |
| CDY37450 | Canola | mitochondrion | 41.04 | 11.14 |
| CDY32490 | Canola | mitochondrion | 41.04 | 11.11 |
| CDY56774 | Canola | plastid | 43.43 | 10.71 |
| CDX69950 | Canola | cytosol | 39.44 | 9.07 |
| CDY62119 | Canola | cytosol | 39.04 | 8.97 |
| CDY02982 | Canola | cytosol | 39.84 | 8.48 |
| CDY18139 | Canola | extracellular, vacuole | 3.59 | 2.97 |
| Zm00001d027244_P001 | Maize | cytosol | 1.99 | 1.37 |
| Zm00001d002717_P001 | Maize | mitochondrion | 1.99 | 1.23 |
| Zm00001d053999_P001 | Maize | cytosol | 0.4 | 0.24 |
| CDY69655 | Canola | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078GK54 | UniProt:A0A078GK54 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | EnsemblPlants:CDY25624 | ProteinID:CDY25624 | ProteinID:CDY25624.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00032905001 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| ScanProsite:PS00674 | PANTHER:PTHR23077 | PANTHER:PTHR23077:SF55 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI0004EF3F21 |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g13160DBnaA04g13160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GK54]
Coordinates
chrLK032177:-:337674..338624
Molecular Weight (calculated)
27357.9 Da
IEP (calculated)
6.284
GRAVY (calculated)
-0.003
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDFEEAVKL VKGSLTREGF STVPDVTWGD VGGLDHLRSE LNDYIVSPIK NPDIYKKFVA KLETGFLLYG PPGCGKTLVA KAVANEAGAN FIHIKGPELL
101: NKYVGESELA MRTLFQRART SSPCVLFFDE VDALTTTSRG REGGSVNGGG LLNQFLTELD GGERHNVYVI GATNRLDVID SAFLRPGRFG NLVYVPLPNA
201: DERVSILKSI AKKRPIDPSV DLDAIAKMNC QRFSGADLAN LVIFVVNVFL F
101: NKYVGESELA MRTLFQRART SSPCVLFFDE VDALTTTSRG REGGSVNGGG LLNQFLTELD GGERHNVYVI GATNRLDVID SAFLRPGRFG NLVYVPLPNA
201: DERVSILKSI AKKRPIDPSV DLDAIAKMNC QRFSGADLAN LVIFVVNVFL F
001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE
Arabidopsis Description
CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.