Factsheet for TraesCS3D01G443600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G487900.1	Wheat	mitochondrion	95.19	95.57
TraesCS3A01G450800.1	Wheat	mitochondrion	94.52	94.77
TraesCS5D01G081900.1	Wheat	mitochondrion	86.9	87.48
EER87717	Sorghum	cytosol	69.52	67.1
Zm00001d035913_P002	Maize	cytosol, mitochondrion	65.64	66.98
Zm00001d045566_P001	Maize	cytosol, mitochondrion	68.58	66.8
Zm00001d009592_P001	Maize	cytosol	23.13	66.03
Os06t0109400-01	Rice	cytosol	67.91	65.97
TraesCS7D01G023600.1	Wheat	mitochondrion	68.18	64.97
Zm00001d022096_P002	Maize	mitochondrion	62.97	62.22
CDY25624	Canola	cytosol	20.86	62.15
GSMUA_Achr4P03560_001	Banana	mitochondrion	58.42	55.88
CDX74308	Canola	mitochondrion	47.19	50.0
KRH44049	Soybean	nucleus	52.54	49.68
VIT_01s0010g02600.t01	Wine grape	cytosol	53.21	48.24
Solyc01g068330.2.1	Tomato	nucleus	52.94	48.23
PGSC0003DMT400046254	Potato	cytosol	52.81	48.05
PGSC0003DMT400015455	Potato	mitochondrion	48.93	47.97
CDX91939	Canola	cytosol, mitochondrion	48.26	46.46
CDX84794	Canola	cytosol	45.05	45.36
CDY23949	Canola	cytosol	43.72	45.1
Bra022833.1-P	Field mustard	cytosol	44.79	45.09
AT3G01610.2	Thale cress	nucleus	48.8	43.98
Bra000999.1-P	Field mustard	cytosol, mitochondrion	48.53	43.58
CDY45794	Canola	nucleus	45.99	43.16
TraesCS3D01G153300.1	Wheat	cytosol	12.57	41.96
CDX89698	Canola	endoplasmic reticulum	38.77	41.73
TraesCS1D01G340100.1	Wheat	cytosol	14.04	41.02
TraesCS1D01G194500.1	Wheat	cytosol	14.44	40.75
TraesCS2D01G353100.1	Wheat	cytosol	28.88	38.03
KRH10420	Soybean	mitochondrion	25.13	37.98
TraesCS3D01G153800.1	Wheat	cytosol	30.75	33.82
TraesCS6D01G149500.1	Wheat	cytosol	16.18	33.61
TraesCS3D01G154000.1	Wheat	cytosol	34.36	32.61
TraesCS1D01G399100.1	Wheat	cytosol	33.69	31.94
TraesCS1D01G253100.1	Wheat	cytosol	33.96	31.75
TraesCS1D01G248000.1	Wheat	cytosol	33.42	31.69
TraesCS1D01G223800.1	Wheat	cytosol	33.56	31.38
TraesCS4D01G267800.1	Wheat	cytosol	33.82	31.12
TraesCS6D01G360700.1	Wheat	cytosol	30.61	31.11
TraesCS7D01G375500.1	Wheat	cytosol	16.58	31.0
TraesCS3D01G153900.1	Wheat	cytosol	32.62	30.96
TraesCS4D01G267600.2	Wheat	cytosol	33.82	30.93
TraesCS7D01G532000.1	Wheat	cytosol	16.44	30.9
TraesCS2D01G476000.1	Wheat	cytosol	16.18	29.02
TraesCS2D01G083900.1	Wheat	golgi	16.04	28.92
TraesCS7D01G157200.1	Wheat	cytosol	16.44	28.87
TraesCS7D01G350300.1	Wheat	cytosol	16.31	28.84
TraesCS6D01G166700.1	Wheat	cytosol, golgi	16.04	28.71
TraesCS6D01G326400.1	Wheat	cytosol	16.04	28.17
TraesCS3D01G417000.1	Wheat	cytosol	15.78	27.19
TraesCS2D01G087900.1	Wheat	cytosol, golgi	16.31	27.17
TraesCS4D01G190600.1	Wheat	cytosol, golgi	16.18	26.89
TraesCS7D01G134800.1	Wheat	cytosol	15.37	26.81
TraesCS2D01G471200.1	Wheat	cytosol	16.18	26.71
TraesCS4D01G105500.2	Wheat	cytosol, plastid	29.68	22.07
TraesCS1D01G073600.1	Wheat	cytosol, plastid	29.41	21.89
TraesCS2D01G458300.3	Wheat	mitochondrion	24.06	19.29
TraesCS5D01G306600.2	Wheat	mitochondrion	22.59	15.45
TraesCS7D01G277100.1	Wheat	cytosol, peroxisome, plastid	21.39	14.68

Protein Annotations

EnsemblPlants:TraesCS3D01G443600.1	EnsemblPlantsGene:TraesCS3D01G443600	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase
PANTHER:PTHR23077	PANTHER:PTHR23077:SF55	PFAM:PF00004	ScanProsite:PS00674	SEG:seg	SMART:SM00382
SUPFAM:SSF52540	TIGR:cd00009	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3D:+:552955719..552960226

Molecular Weight (calculated)

82638.8 Da

IEP (calculated)

7.351

GRAVY (calculated)

-0.327

Length

748 amino acids

Sequence
(BLAST)

001: MAKRPRRSYS LESRVRRLIL SDAGLAVPSS SADDVARAIR SRHREYQRYK LELFASVVRR AISSLPPPGD ASCSEDSASG APRRRSSHDA TSSSTTTHSH
101: SPPPPAFDVT KSLLRSCYSS QTSKRDPDAD QQLGMELAVE KVLMGPDAQG GRSERKRVMF ADLGGMESVI EQLMLEVVVP LLHPELPLHL GVRPVAGILL
201: HGPPGCGKTT LAEAIANETG VSFYKRSATE FVSGVSGASE ENIRTLFNDA YRTAPSIVFI DEIDAIASKR DDMQRGMERR VVTQLMTCMD EFHQNIPSDA
301: DDMEDDSQSY EKQKPGYVIV IGATNRPDAV DQALRRPGRF DREIYLGVPD ENARKQILER LTQKLRLPPE GQFDLLKIAK ATPGFVGADL KALVDTAGSV
401: AIKRFFNARK DKFLKEGNNL DYLKHPLDKH EVQRLSIIMD YFEEAIKDIV QPSLRREGFS SVPDVTWACV GGLDSLKKEL NRSIVRCIKY PEFYKKFGVN
501: MQAGVLLFGP PGCGKTLIAK AVAHDAGANF IHIKGPEGLN KYVGESEAYI RRTFARARLN SPCILFFDEI DALTTKRGME GAWVVERLLN QLLIELDGAD
601: QREGVYVIGA TNRIDVIDDA LLRPGRLGQK YFVPLPSANE RHSILKALIC SQRKPVSCTV DLDAFARRAE CNNLSGADLA SLVDEAAKEA LDESLELLEN
701: GALSISSLCS VASIELSHFE QALSKIKPSV SEQQRKHYEA LSQKYSAM

Best Arabidopsis Sequence Match ( AT3G01610.1 )
(BLAST)

001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE

Arabidopsis Description

CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.