Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G174800.1 | Wheat | cytosol | 92.02 | 97.38 |
| TraesCS7A01G277100.1 | Wheat | peroxisome | 97.16 | 97.16 |
| HORVU7Hr1G058410.7 | Barley | cytosol, peroxisome | 97.16 | 95.66 |
| EES15200 | Sorghum | cytosol | 80.73 | 80.44 |
| Zm00001d049974_P004 | Maize | peroxisome | 78.07 | 76.32 |
| TraesCS5D01G306600.2 | Wheat | mitochondrion | 54.4 | 54.2 |
| GSMUA_Achr11P... | Banana | cytosol | 54.77 | 53.26 |
| VIT_00s0125g00170.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 51.1 | 49.12 |
| Solyc04g057960.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 49.45 | 47.78 |
| CDX69950 | Canola | cytosol | 46.97 | 46.89 |
| CDY62119 | Canola | cytosol | 46.61 | 46.52 |
| KRH50491 | Soybean | cytosol | 48.17 | 46.46 |
| Bra009342.1-P | Field mustard | cytosol | 47.16 | 45.85 |
| AT5G08470.1 | Thale cress | cytosol | 47.06 | 45.4 |
| TraesCS3D01G153300.1 | Wheat | cytosol | 7.89 | 38.39 |
| TraesCS1D01G340100.1 | Wheat | cytosol | 8.53 | 36.33 |
| TraesCS1D01G194500.1 | Wheat | cytosol | 8.81 | 36.23 |
| TraesCS2D01G353100.1 | Wheat | cytosol | 15.05 | 28.87 |
| TraesCS6D01G149500.1 | Wheat | cytosol | 9.17 | 27.78 |
| TraesCS7D01G375500.1 | Wheat | cytosol | 9.72 | 26.5 |
| TraesCS7D01G532000.1 | Wheat | cytosol | 9.54 | 26.13 |
| TraesCS6D01G166700.1 | Wheat | cytosol, golgi | 10.0 | 26.08 |
| TraesCS7D01G350300.1 | Wheat | cytosol | 10.09 | 26.0 |
| TraesCS3D01G153800.1 | Wheat | cytosol | 15.87 | 25.44 |
| TraesCS4D01G190600.1 | Wheat | cytosol, golgi | 10.09 | 24.44 |
| TraesCS2D01G083900.1 | Wheat | golgi | 9.17 | 24.1 |
| TraesCS2D01G476000.1 | Wheat | cytosol | 9.17 | 23.98 |
| TraesCS1D01G248000.1 | Wheat | cytosol | 17.25 | 23.83 |
| TraesCS1D01G399100.1 | Wheat | cytosol | 17.16 | 23.7 |
| TraesCS2D01G087900.1 | Wheat | cytosol, golgi | 9.72 | 23.61 |
| TraesCS1D01G253100.1 | Wheat | cytosol | 17.25 | 23.5 |
| TraesCS3D01G154000.1 | Wheat | cytosol | 16.97 | 23.48 |
| TraesCS6D01G326400.1 | Wheat | cytosol | 9.17 | 23.47 |
| TraesCS7D01G157200.1 | Wheat | cytosol | 9.17 | 23.47 |
| TraesCS1D01G223800.1 | Wheat | cytosol | 17.16 | 23.38 |
| TraesCS4D01G267800.1 | Wheat | cytosol | 17.43 | 23.37 |
| TraesCS4D01G267600.2 | Wheat | cytosol | 17.34 | 23.11 |
| TraesCS3D01G153900.1 | Wheat | cytosol | 16.7 | 23.1 |
| TraesCS7D01G134800.1 | Wheat | cytosol | 8.99 | 22.84 |
| TraesCS3D01G417000.1 | Wheat | cytosol | 8.81 | 22.12 |
| TraesCS6D01G360700.1 | Wheat | cytosol | 14.86 | 22.01 |
| TraesCS2D01G471200.1 | Wheat | cytosol | 8.9 | 21.41 |
| TraesCS7D01G023600.1 | Wheat | mitochondrion | 15.41 | 21.4 |
| TraesCS3D01G443600.1 | Wheat | mitochondrion | 14.68 | 21.39 |
| TraesCS2D01G458300.3 | Wheat | mitochondrion | 18.26 | 21.33 |
| TraesCS5D01G081900.1 | Wheat | mitochondrion | 14.5 | 21.27 |
| TraesCS1D01G073600.1 | Wheat | cytosol, plastid | 18.07 | 19.6 |
| TraesCS4D01G105500.2 | Wheat | cytosol, plastid | 18.07 | 19.58 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:23.4.1.5.1.1 | Gene3D:3.10.330.10 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | InterPro:Asp_de-COase-like_dom_sf | InterPro:CDC48_domain_2-like_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005777 | GO:GO:0005778 | GO:GO:0006625 | GO:GO:0006810 | GO:GO:0007031 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0042623 | InterPro:P-loop_NTPase |
| InterPro:PEX-N_psi_beta-barrel | PFAM:PF00004 | PFAM:PF09262 | ScanProsite:PS00674 | PANTHER:PTHR23077 | PANTHER:PTHR23077:SF12 |
| InterPro:Pex1 | SMART:SM00382 | SUPFAM:SSF50692 | SUPFAM:SSF52540 | SUPFAM:SSF54585 | EnsemblPlantsGene:TraesCS7D01G277100 |
| EnsemblPlants:TraesCS7D01G277100.1 | TIGR:cd00009 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7D:+:265684830..265694094
Molecular Weight (calculated)
119590.0 Da
IEP (calculated)
6.347
GRAVY (calculated)
-0.137
Length
1090 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASGGGMEVE VRVVGGARSC FVALPLHLIE ALSRTSASGD LPPVLALDLR AAAGARWSLA WSGAASRSRA IEVAQELAEC ISLPDGTIAQ LSVARSLTRA
0101: DSVSIEPFSE DDWEILESRA DLAEETILQQ VGIVYEGMKF PLWLDGHNIV KFVVVSSCPK KSVVQLVPGT EVAVAPKKRK EKYQDVQKQG SLKEQVETKA
0201: LLRVQAADRK YAHKFKSKGI ELGVVLSYAV LIHPDTAART SFGNLQLVTI SSKSSPKGLI EQGKEAAQKK GVSVPKRTRE VVVYVLFSDS VAKGHVMLPY
0301: SIRHFISADT HSWVYVKKYT ANVKKDEPIM KMCPLHFSMH EKYVHDNSDL GGHEKDTWRN TSIPSENGNF FQKAPNNEHL LSTDADSISE SMSEQKVLIK
0401: HWFIGQLKEM AFHAENSEIS SVVLPAKVLI HFEVVDGKLS RGVDFLYLLT ITFENPGYNN SQGNVEITWK APTDDLENLE LNFGRLELGE ALSFDSVVDD
0501: GFNNAFKLTR SSLGWMENAM SDVTKRLSVL VSSTALRLFN RLKLPFPGYV LVHGPRGSGK TALTRAAAKY FEDHQEILAH IIYMDCSKLA IGKAKETRQA
0601: IEESISEALL HSPSIIIFDD LDNVISVSSD PQVSQSSSSS DSLVRYLTDI LDEYKDKSRN ACGYGPIALM ASVQSLQSLP QELTSSGRFD FHVELRALAI
0701: PEREALLKHQ VEEHKLQCSE EVISEIASKC DGYDAYDLGI LVDRAVHAAA SRFVLPSACL NSVNPTLVKE DFLKALHDFL PVAMRDLRKY APDGNNGGWE
0801: DVGGLNEAVT IIKETLELPS KYPNVFTKAP VRMRSNILLY GPPGCGKTHI VRVAAAACSL RFISVKGPEL LNKYIGSSEQ SVRDFFAKAA AAAPCLLFFD
0901: EFDSIAPQRG THSAGVSDRV VNQFLTELDG VETLTGVFVF AATSKPQLID AALLRPGRFD RLVFCDFPRW DERVEILKVH SRTVSLASDA SLEDVASLTE
1001: GFTGADLAAI ITDAGLAAVH EVLDSRQDGI PEREPCISKE LLMSVAMKAR PSTPADDKSG YDKEFGEFVS SRKSLSTKAR ESKGKKVTLA
0101: DSVSIEPFSE DDWEILESRA DLAEETILQQ VGIVYEGMKF PLWLDGHNIV KFVVVSSCPK KSVVQLVPGT EVAVAPKKRK EKYQDVQKQG SLKEQVETKA
0201: LLRVQAADRK YAHKFKSKGI ELGVVLSYAV LIHPDTAART SFGNLQLVTI SSKSSPKGLI EQGKEAAQKK GVSVPKRTRE VVVYVLFSDS VAKGHVMLPY
0301: SIRHFISADT HSWVYVKKYT ANVKKDEPIM KMCPLHFSMH EKYVHDNSDL GGHEKDTWRN TSIPSENGNF FQKAPNNEHL LSTDADSISE SMSEQKVLIK
0401: HWFIGQLKEM AFHAENSEIS SVVLPAKVLI HFEVVDGKLS RGVDFLYLLT ITFENPGYNN SQGNVEITWK APTDDLENLE LNFGRLELGE ALSFDSVVDD
0501: GFNNAFKLTR SSLGWMENAM SDVTKRLSVL VSSTALRLFN RLKLPFPGYV LVHGPRGSGK TALTRAAAKY FEDHQEILAH IIYMDCSKLA IGKAKETRQA
0601: IEESISEALL HSPSIIIFDD LDNVISVSSD PQVSQSSSSS DSLVRYLTDI LDEYKDKSRN ACGYGPIALM ASVQSLQSLP QELTSSGRFD FHVELRALAI
0701: PEREALLKHQ VEEHKLQCSE EVISEIASKC DGYDAYDLGI LVDRAVHAAA SRFVLPSACL NSVNPTLVKE DFLKALHDFL PVAMRDLRKY APDGNNGGWE
0801: DVGGLNEAVT IIKETLELPS KYPNVFTKAP VRMRSNILLY GPPGCGKTHI VRVAAAACSL RFISVKGPEL LNKYIGSSEQ SVRDFFAKAA AAAPCLLFFD
0901: EFDSIAPQRG THSAGVSDRV VNQFLTELDG VETLTGVFVF AATSKPQLID AALLRPGRFD RLVFCDFPRW DERVEILKVH SRTVSLASDA SLEDVASLTE
1001: GFTGADLAAI ITDAGLAAVH EVLDSRQDGI PEREPCISKE LLMSVAMKAR PSTPADDKSG YDKEFGEFVS SRKSLSTKAR ESKGKKVTLA
0001: MSRNRQIIIP DDVMETEAVV NTVAGVDCFV SLPRQLLHAL QSTSSSPLPP LLPVELRSGD RRWSVAWSGS SSSSSAIEIA RVFAESISLP DGTVVKVRVL
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA
Arabidopsis Description
PEX1Peroxisome biogenesis protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.