Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G277100.1 | Wheat | cytosol, peroxisome, plastid | 97.38 | 92.02 |
| TraesCS7A01G277100.1 | Wheat | peroxisome | 96.89 | 91.56 |
| HORVU7Hr1G058410.7 | Barley | cytosol, peroxisome | 95.92 | 89.25 |
| EES15200 | Sorghum | cytosol | 80.49 | 75.78 |
| Zm00001d049974_P004 | Maize | peroxisome | 79.13 | 73.09 |
| TraesCS5B01G299200.1 | Wheat | mitochondrion | 54.37 | 51.19 |
| GSMUA_Achr11P... | Banana | cytosol | 54.95 | 50.49 |
| VIT_00s0125g00170.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 51.36 | 46.65 |
| Solyc04g057960.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 50.39 | 46.01 |
| CDX69950 | Canola | cytosol | 47.48 | 44.78 |
| CDY62119 | Canola | cytosol | 47.28 | 44.6 |
| KRH50491 | Soybean | cytosol | 48.64 | 44.34 |
| Bra009342.1-P | Field mustard | cytosol | 47.67 | 43.8 |
| AT5G08470.1 | Thale cress | cytosol | 47.28 | 43.1 |
| TraesCS2B01G373100.1 | Wheat | cytosol | 14.85 | 26.89 |
| TraesCS1B01G235400.1 | Wheat | cytosol | 15.44 | 24.77 |
| TraesCS6B01G188500.1 | Wheat | cytosol | 9.61 | 24.75 |
| TraesCS6B01G207100.1 | Wheat | cytosol | 9.81 | 24.16 |
| TraesCS7B01G254400.1 | Wheat | cytosol | 9.9 | 24.11 |
| TraesCS7B01G280400.1 | Wheat | cytosol, unclear | 9.32 | 24.0 |
| TraesCS7B01G468900.1 | Wheat | cytosol | 9.22 | 23.87 |
| TraesCS3B01G171400.1 | Wheat | cytosol | 16.6 | 23.52 |
| TraesCS3B01G154400.1 | Wheat | cytosol | 17.38 | 22.72 |
| TraesCS1B01G259200.1 | Wheat | cytosol | 17.38 | 22.69 |
| TraesCS1B01G419200.1 | Wheat | cytosol | 17.38 | 22.69 |
| TraesCS4B01G189200.1 | Wheat | cytosol | 9.9 | 22.67 |
| TraesCS3B01G171200.1 | Wheat | cytosol | 17.28 | 22.59 |
| TraesCS3B01G172000.1 | Wheat | cytosol | 17.09 | 22.45 |
| TraesCS2B01G100400.1 | Wheat | cytosol, plastid | 9.03 | 22.41 |
| TraesCS3B01G172100.1 | Wheat | cytosol | 17.18 | 22.41 |
| TraesCS1B01G235300.1 | Wheat | cytosol | 17.38 | 22.38 |
| TraesCS2B01G499600.1 | Wheat | cytosol | 9.03 | 22.3 |
| TraesCS4B01G268400.1 | Wheat | golgi | 17.48 | 22.14 |
| TraesCS1B01G235500.1 | Wheat | cytosol | 17.09 | 22.0 |
| TraesCS4B01G268200.1 | Wheat | cytosol | 17.38 | 21.91 |
| TraesCS2B01G105700.1 | Wheat | cytosol | 9.51 | 21.83 |
| TraesCS7B01G036400.1 | Wheat | cytosol | 8.93 | 21.55 |
| TraesCS1B01G192400.1 | Wheat | cytosol | 16.89 | 21.53 |
| TraesCS3B01G171300.1 | Wheat | cytosol | 15.15 | 21.4 |
| TraesCS6B01G376500.1 | Wheat | golgi | 8.83 | 21.36 |
| TraesCS7B01G060900.1 | Wheat | golgi | 8.83 | 21.36 |
| TraesCS3B01G457100.1 | Wheat | cytosol, golgi | 8.83 | 20.97 |
| TraesCS3B01G487900.1 | Wheat | mitochondrion | 14.66 | 20.27 |
| TraesCS2B01G493900.1 | Wheat | cytosol | 8.83 | 20.09 |
| TraesCS2B01G494200.1 | Wheat | cytosol | 8.83 | 19.96 |
| TraesCS2B01G480000.3 | Wheat | mitochondrion | 17.77 | 19.61 |
| TraesCS5B01G323100.1 | Wheat | cytosol | 10.58 | 18.76 |
| TraesCS1B01G089700.1 | Wheat | cytosol, plastid | 17.86 | 18.76 |
| TraesCS4B01G108300.1 | Wheat | plastid | 17.57 | 18.1 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:23.4.1.5.1.1 | Gene3D:3.10.330.10 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core |
| InterPro:Asp_de-COase-like_dom_sf | InterPro:CDC48_domain_2-like_sf | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005777 | GO:GO:0005778 | GO:GO:0006625 | GO:GO:0006810 | GO:GO:0007031 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0042623 | InterPro:P-loop_NTPase |
| InterPro:PEX-N_psi_beta-barrel | PFAM:PF00004 | PFAM:PF09262 | PANTHER:PTHR23077 | PANTHER:PTHR23077:SF12 | InterPro:Pex1 |
| SMART:SM00382 | SUPFAM:SSF50692 | SUPFAM:SSF52540 | SUPFAM:SSF54585 | EnsemblPlantsGene:TraesCS7B01G174800 | EnsemblPlants:TraesCS7B01G174800.1 |
| TIGR:cd00009 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:245980540..245995298
Molecular Weight (calculated)
113165.0 Da
IEP (calculated)
5.828
GRAVY (calculated)
-0.130
Length
1030 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASGGGMEVE VRVVGGARSC FVALPLHLIE ALSRTSASGD LPPVLALDLR AAAGARWSLA WSGAASRSRA IEVAQELAEC ISLPDGTIAQ LSVAHSLTRA
0101: DSVSIEPFSE DDWEILESRA DLAEETILQQ VGIVYEGMKF PLWLDGHNIV KFVVVSSSPK KSVVQLVPGT EVAVAPKKRK EKYQDVQKQG SLKEQVETKA
0201: LLRVQAADRK YTHKFKSKGI ELGVVLSYAV LIHPDTAART SFDSVAKGHV MLPYSIRHFI SADTHSLVYV KKYTANVKKD EPIMKMCPLH FSMHEKYVHD
0301: NSDLGGYEKD TWRNTSVPLE NGNFFQKAPS NEHLLSADAD SISESMSEQK VLIKHWLIGQ LKELAFHAEN SEISSVVLPA KVLIHFEVVD GKLRKGDDFL
0401: YLLTITFENP AYNNSQGNVE ITWKAPTDDF ENLELNFGRL ELGEALSFDS VVDDGFDNDF KLTRSSLGWM ENAMSDVTKR LSVLVSSTAL RLFNRLKLPF
0501: PGHVLVHGPR GSGKTALTRA AAKYFEDHQE ILAHIIYMDC SKLAIGKAKE TRQTIEESIS EALLHSPSII IFDDLDNVIS ISSDPQVSQS SSSSDSLVRY
0601: LTDILDEYKD KSRNACGYGP IALMASVQSL QSLPQELTSS GRFDFHVELR ALAIPEREAL LKHQVEEHKL QCSEEIISEI ASKCDGYDAY DLGILVDRAV
0701: HAAASRFVLP SACLNSVNPT LVKDDFLKAL HDFLLVAMRD LRKYAPDGNN GGWEDVGGLN EAVTIIKETL ELPSKYPNVF TKAPVRMRSS ILLYGPPGCG
0801: KTHIVRVAAA ACSLRFISVK GPELLNKYIG SSEQSVRDFF AKAAAAAPCL LFFDEFDSIA PQRGTHSAGV SDRVVNQFLT ELDGVETLTG VFVFAATRFD
0901: RLVFCDFPRW DERVEILKVH SRTVSLASDA SLEDVASLTE GFTGADLAAI LTDAGLAAVH EVLDSRQDGI PEREPCISKE LLVSVAMKAR PSTPADDKSG
1001: YDKEFGEFVS SRKSLSTKAR ESKGKKVTLA
0101: DSVSIEPFSE DDWEILESRA DLAEETILQQ VGIVYEGMKF PLWLDGHNIV KFVVVSSSPK KSVVQLVPGT EVAVAPKKRK EKYQDVQKQG SLKEQVETKA
0201: LLRVQAADRK YTHKFKSKGI ELGVVLSYAV LIHPDTAART SFDSVAKGHV MLPYSIRHFI SADTHSLVYV KKYTANVKKD EPIMKMCPLH FSMHEKYVHD
0301: NSDLGGYEKD TWRNTSVPLE NGNFFQKAPS NEHLLSADAD SISESMSEQK VLIKHWLIGQ LKELAFHAEN SEISSVVLPA KVLIHFEVVD GKLRKGDDFL
0401: YLLTITFENP AYNNSQGNVE ITWKAPTDDF ENLELNFGRL ELGEALSFDS VVDDGFDNDF KLTRSSLGWM ENAMSDVTKR LSVLVSSTAL RLFNRLKLPF
0501: PGHVLVHGPR GSGKTALTRA AAKYFEDHQE ILAHIIYMDC SKLAIGKAKE TRQTIEESIS EALLHSPSII IFDDLDNVIS ISSDPQVSQS SSSSDSLVRY
0601: LTDILDEYKD KSRNACGYGP IALMASVQSL QSLPQELTSS GRFDFHVELR ALAIPEREAL LKHQVEEHKL QCSEEIISEI ASKCDGYDAY DLGILVDRAV
0701: HAAASRFVLP SACLNSVNPT LVKDDFLKAL HDFLLVAMRD LRKYAPDGNN GGWEDVGGLN EAVTIIKETL ELPSKYPNVF TKAPVRMRSS ILLYGPPGCG
0801: KTHIVRVAAA ACSLRFISVK GPELLNKYIG SSEQSVRDFF AKAAAAAPCL LFFDEFDSIA PQRGTHSAGV SDRVVNQFLT ELDGVETLTG VFVFAATRFD
0901: RLVFCDFPRW DERVEILKVH SRTVSLASDA SLEDVASLTE GFTGADLAAI LTDAGLAAVH EVLDSRQDGI PEREPCISKE LLVSVAMKAR PSTPADDKSG
1001: YDKEFGEFVS SRKSLSTKAR ESKGKKVTLA
0001: MSRNRQIIIP DDVMETEAVV NTVAGVDCFV SLPRQLLHAL QSTSSSPLPP LLPVELRSGD RRWSVAWSGS SSSSSAIEIA RVFAESISLP DGTVVKVRVL
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATRYS HPNKSILHII
1001: FCVRCII
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATRYS HPNKSILHII
1001: FCVRCII
Arabidopsis Description
PEX1Peroxisome biogenesis protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.