Factsheet for TraesCS2B01G100400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G083900.1	Wheat	golgi	99.52	99.52
TraesCS2A01G086400.1	Wheat	cytosol	99.52	99.52
HORVU2Hr1G014000.1	Barley	cytosol	98.07	99.27
GSMUA_Achr6P12250_001	Banana	cytosol	70.12	96.04
Os02t0325100-01	Rice	plastid	96.39	95.47
TraesCS2B01G499600.1	Wheat	cytosol	95.9	95.44
PGSC0003DMT400006190	Potato	cytosol	74.94	95.4
KXG39890	Sorghum	cytosol	95.18	94.05
CDX88666	Canola	cytosol	88.19	90.59
CDY43865	Canola	cytosol	88.19	90.59
CDY58566	Canola	cytosol	88.19	90.59
Zm00001d050616_P002	Maize	plastid	94.7	90.55
Bra002662.1-P	Field mustard	cytosol	87.95	90.35
CDY32995	Canola	cytosol, extracellular	87.95	90.35
CDY32714	Canola	cytosol	87.71	90.1
Bra020378.1-P	Field mustard	cytosol	87.71	90.1
CDY02806	Canola	cytosol	87.71	90.1
Bra006775.1-P	Field mustard	cytosol	84.82	90.03
AT5G58290.1	Thale cress	cytosol	88.19	89.71
VIT_06s0004g08220.t01	Wine grape	cytosol	90.12	89.47
Solyc06g082660.2.1	Tomato	cytosol, nucleus	88.92	89.13
Solyc06g082630.2.1	Tomato	cytosol, plastid	88.67	88.89
KRH30674	Soybean	cytosol, nucleus	87.95	88.38
KRG98107	Soybean	cytosol	89.64	88.15
KRH30673	Soybean	cytosol, nucleus	89.16	87.47
Zm00001d015886_P002	Maize	cytosol	83.37	63.84
TraesCS2B01G493900.1	Wheat	cytosol	52.29	47.9
TraesCS2B01G494200.1	Wheat	cytosol	52.05	47.37
TraesCS2B01G105700.1	Wheat	cytosol	45.78	42.32
TraesCS7B01G468900.1	Wheat	cytosol	40.48	42.21
TraesCS4B01G189200.1	Wheat	cytosol	44.82	41.33
TraesCS7B01G280400.1	Wheat	cytosol, unclear	39.28	40.75
TraesCS6B01G188500.1	Wheat	cytosol	38.31	39.75
TraesCS6B01G207100.1	Wheat	cytosol	38.07	37.8
TraesCS7B01G036400.1	Wheat	cytosol	38.31	37.24
TraesCS7B01G254400.1	Wheat	cytosol	37.83	37.12
TraesCS3B01G457100.1	Wheat	cytosol, golgi	38.8	37.1
TraesCS6B01G376500.1	Wheat	golgi	37.59	36.62
TraesCS7B01G060900.1	Wheat	golgi	37.35	36.38
TraesCS2B01G373100.1	Wheat	cytosol	29.4	21.44
TraesCS1B01G235400.1	Wheat	cytosol	29.4	19.0
TraesCS3B01G171400.1	Wheat	cytosol	30.12	17.19
TraesCS1B01G259200.1	Wheat	cytosol	31.81	16.73
TraesCS3B01G172100.1	Wheat	cytosol	31.81	16.71
TraesCS1B01G419200.1	Wheat	cytosol	31.57	16.6
TraesCS3B01G154400.1	Wheat	cytosol	31.33	16.5
TraesCS3B01G171200.1	Wheat	cytosol	31.08	16.37
TraesCS1B01G192400.1	Wheat	cytosol	31.33	16.09
TraesCS3B01G172000.1	Wheat	cytosol	30.36	16.07
TraesCS1B01G235300.1	Wheat	cytosol	30.84	16.0
TraesCS4B01G268400.1	Wheat	golgi	31.33	15.99
TraesCS3B01G487900.1	Wheat	mitochondrion	28.67	15.97
TraesCS4B01G268200.1	Wheat	cytosol	31.08	15.79
TraesCS1B01G235500.1	Wheat	cytosol	30.36	15.75
TraesCS3B01G171300.1	Wheat	cytosol	23.13	13.17
TraesCS2B01G480000.3	Wheat	mitochondrion	26.99	12.0
TraesCS1B01G089700.1	Wheat	cytosol, plastid	27.47	11.62
TraesCS4B01G108300.1	Wheat	plastid	27.95	11.6
TraesCS5B01G323100.1	Wheat	cytosol	15.66	11.19
TraesCS5B01G299200.1	Wheat	mitochondrion	25.78	9.78
TraesCS7B01G174800.1	Wheat	cytosol	22.41	9.03

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.3	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0030163	GO:GO:0036402	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	InterPro:PSMC4
PANTHER:PTHR23073	PANTHER:PTHR23073:SF8	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR01242	EnsemblPlantsGene:TraesCS2B01G100400
EnsemblPlants:TraesCS2B01G100400.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2B:-:59757213..59760959

Molecular Weight (calculated)

46163.4 Da

IEP (calculated)

5.929

GRAVY (calculated)

-0.337

Length

415 amino acids

Sequence
(BLAST)

001: MSAAAVAPSP AAPLPSAPPP SYPAAPPAPS AEDDDDLYGR LKSLQRHMEF VEIQEEYVKD EQKNLKRELL RAQEEVKRIQ SVPLVIGQFM EMVDGNNGIV
101: GSTTGSNYYV RILSTINREL LKPSASVALH RHSNALVDVL PPEADSSISL LASSEKPNVL YSDIGGCDIQ KQEIREAVEL PLTHHELYKQ IGIDPPRGVL
201: LYGPPGTGKT MLAKAVAHHT TAAFIRVVGS EFVQKYLGEG PRMVRDVFRL AKENAPAIIF IDEVDAIATA RFDAQTGADR EVQRILMELL NQMDGFDQTV
301: NVKVIMATNR ADTLDPALLR PGRLDRKIEF PLPDRRQKRL VFQVCTAKMN LSDEVDLEDY VSRPDKISAA DITAICQEAG MHAVRKNRYV ILPKDFEKGY
401: RTNVKKPESD FDFYK

Best Arabidopsis Sequence Match ( AT2G20140.1 )
(BLAST)

001: MGQGPSGGLN RQGDRKPDGG EKKEKKFEPA APPARVGRKQ RKQKGPEAAA RLPTVTPSTK CKLRLLKLER IKDYLLMEEE FVANQERLKP QEEKAEEDRS
101: KVDDLRGTPM SVGNLEELID ENHAIVSSSV GPEYYVGILS FVDKDQLEPG CSILMHNKVL SVVGILQDEV DPMVSVMKVE KAPLESYADI GGLEAQIQEI
201: KEAVELPLTH PELYEDIGIK PPKGVILYGE PGTGKTLLAK AVANSTSATF LRVVGSELIQ KYLGDGPKLV RELFRVADDL SPSIVFIDEI DAVGTKRYDA
301: NSGGEREIQR TMLELLNQLD GFDSRGDVKV ILATNRIESL DPALLRPGRI DRKIEFPLPD IKTRRRIFQI HTSKMTLAED VNLEEFVMTK DEFSGADIKA
401: ICTEAGLLAL RERRMKVTHV DFKKAKEKVM FKKKEGVPEG LYM

Arabidopsis Description

RPT2BRPT2b [Source:UniProtKB/TrEMBL;Acc:A0A178VM16]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.