Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7A01G545700.1 | Wheat | cytosol | 95.23 | 95.23 |
TraesCS7D01G532000.1 | Wheat | cytosol | 94.97 | 94.97 |
HORVU7Hr1G119300.13 | Barley | cytosol | 90.45 | 89.55 |
TraesCS7B01G280400.1 | Wheat | cytosol, unclear | 77.64 | 77.25 |
TraesCS6B01G188500.1 | Wheat | cytosol | 77.39 | 77.0 |
KRH51796 | Soybean | cytosol | 76.63 | 76.63 |
KRH61120 | Soybean | endoplasmic reticulum | 76.63 | 76.63 |
GSMUA_Achr4P03720_001 | Banana | cytosol | 76.63 | 76.63 |
GSMUA_AchrUn_... | Banana | cytosol | 76.88 | 76.31 |
KRH05868 | Soybean | cytosol, nucleus | 76.38 | 76.19 |
KRH15139 | Soybean | cytosol, endoplasmic reticulum, nucleus | 76.13 | 75.94 |
Solyc01g109940.2.1 | Tomato | nucleus | 75.88 | 75.88 |
PGSC0003DMT400079514 | Potato | cytosol | 75.88 | 75.88 |
VIT_18s0001g13090.t01 | Wine grape | cytosol | 75.88 | 75.88 |
CDY22373 | Canola | cytosol | 75.63 | 75.44 |
CDX71534 | Canola | cytosol | 75.63 | 75.44 |
VIT_03s0038g04350.t01 | Wine grape | cytosol | 75.63 | 75.44 |
Bra033655.1-P | Field mustard | cytosol | 75.63 | 75.44 |
AT1G45000.1 | Thale cress | cytosol | 75.63 | 75.44 |
AT5G43010.1 | Thale cress | cytosol | 75.38 | 75.19 |
Bra035338.1-P | Field mustard | cytosol | 75.13 | 74.94 |
CDY02428 | Canola | cytosol, extracellular | 75.13 | 74.94 |
CDY25226 | Canola | cytosol | 75.13 | 74.94 |
GSMUA_Achr7P17620_001 | Banana | cytosol | 76.63 | 74.39 |
Solyc10g054040.1.1 | Tomato | cytosol, unclear | 71.36 | 71.18 |
CDY20370 | Canola | cytosol | 41.46 | 61.34 |
KRH51488 | Soybean | mitochondrion | 61.56 | 57.92 |
CDY39032 | Canola | cytosol | 36.43 | 57.77 |
CDY39033 | Canola | cytosol | 55.28 | 54.19 |
KRH00031 | Soybean | plastid | 45.48 | 52.46 |
CDY20371 | Canola | cytosol, plastid | 54.02 | 48.86 |
TraesCS2B01G100400.1 | Wheat | cytosol, plastid | 42.21 | 40.48 |
TraesCS6B01G207100.1 | Wheat | cytosol | 41.96 | 39.95 |
TraesCS2B01G499600.1 | Wheat | cytosol | 41.46 | 39.57 |
TraesCS7B01G254400.1 | Wheat | cytosol | 41.96 | 39.48 |
TraesCS6B01G376500.1 | Wheat | golgi | 40.2 | 37.56 |
TraesCS7B01G060900.1 | Wheat | golgi | 39.45 | 36.85 |
TraesCS2B01G105700.1 | Wheat | cytosol | 39.95 | 35.41 |
TraesCS4B01G189200.1 | Wheat | cytosol | 39.95 | 35.33 |
TraesCS3B01G457100.1 | Wheat | cytosol, golgi | 38.19 | 35.02 |
Bra008198.1-P | Field mustard | cytosol | 54.77 | 34.71 |
TraesCS7B01G036400.1 | Wheat | cytosol | 36.68 | 34.19 |
TraesCS2B01G494200.1 | Wheat | cytosol | 37.44 | 32.68 |
TraesCS2B01G493900.1 | Wheat | cytosol | 36.93 | 32.45 |
TraesCS2B01G373100.1 | Wheat | cytosol | 29.65 | 20.74 |
TraesCS1B01G235400.1 | Wheat | cytosol | 32.16 | 19.94 |
TraesCS3B01G171400.1 | Wheat | cytosol | 32.16 | 17.61 |
TraesCS3B01G172100.1 | Wheat | cytosol | 32.91 | 16.58 |
TraesCS3B01G487900.1 | Wheat | mitochondrion | 30.9 | 16.51 |
TraesCS3B01G154400.1 | Wheat | cytosol | 32.66 | 16.5 |
TraesCS4B01G268400.1 | Wheat | golgi | 33.67 | 16.48 |
TraesCS1B01G259200.1 | Wheat | cytosol | 32.66 | 16.48 |
TraesCS1B01G235300.1 | Wheat | cytosol | 32.91 | 16.38 |
TraesCS1B01G419200.1 | Wheat | cytosol | 32.41 | 16.35 |
TraesCS1B01G235500.1 | Wheat | cytosol | 32.66 | 16.25 |
TraesCS3B01G171200.1 | Wheat | cytosol | 32.16 | 16.24 |
TraesCS1B01G192400.1 | Wheat | cytosol | 32.91 | 16.21 |
TraesCS4B01G268200.1 | Wheat | cytosol | 33.17 | 16.16 |
TraesCS3B01G172000.1 | Wheat | cytosol | 31.41 | 15.94 |
TraesCS3B01G171300.1 | Wheat | cytosol | 23.37 | 12.76 |
TraesCS2B01G480000.3 | Wheat | mitochondrion | 28.14 | 12.0 |
TraesCS1B01G089700.1 | Wheat | cytosol, plastid | 29.15 | 11.82 |
TraesCS4B01G108300.1 | Wheat | plastid | 29.65 | 11.8 |
TraesCS5B01G323100.1 | Wheat | cytosol | 16.83 | 11.53 |
TraesCS7B01G174800.1 | Wheat | cytosol | 23.87 | 9.22 |
TraesCS5B01G299200.1 | Wheat | mitochondrion | 23.87 | 8.68 |
Protein Annotations
Gene3D:1.10.8.60 | MapMan:19.2.6.2.1.4 | Gene3D:2.40.50.140 | InterPro:26S_Psome_P45-like | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase |
InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 |
GO:GO:0036402 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | InterPro:PSMC6 | PANTHER:PTHR23073 |
PANTHER:PTHR23073:SF59 | SMART:SM00382 | SUPFAM:SSF52540 | TIGRFAMs:TIGR01242 | EnsemblPlantsGene:TraesCS7B01G468900 | EnsemblPlants:TraesCS7B01G468900.1 |
TIGR:cd00009 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:725962133..725965538
Molecular Weight (calculated)
44191.7 Da
IEP (calculated)
8.349
GRAVY (calculated)
-0.240
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATADDARR AAAVAKYRAS LLACRERQSL LTTGEENLKK ARKEREITDE HVKAFQCVGQ IVGEVLRPLA GDRFIVKVRS GPRYLVNCRN KLNTESLKTG
101: TRVCLDPSTL TIVRMLPREV DPLVFNMVHE DPGNVSFSAV GGLSDQIREI RETIELPLMN PELFLRVGIK PPKGVLLYGP PGTGKTLLAR ALASNIDVNF
201: IKVVSSAVIG KYIGESARII REMFAYARNH EPCIIFMDEI DALGGRRFSE GTSADREIQR TLMELLNQLD GFDELGKVKI IMATNRPDVL DPALLRPGRL
301: DRKIEIPLPN EQARQEILKI HAAGMAKHGE IDYEAAAKLA EGFNAADLRN ICTEAGMAAI RAERDYAINE DFIKGLRKIM DMKKLESSAD YKADFGKD
101: TRVCLDPSTL TIVRMLPREV DPLVFNMVHE DPGNVSFSAV GGLSDQIREI RETIELPLMN PELFLRVGIK PPKGVLLYGP PGTGKTLLAR ALASNIDVNF
201: IKVVSSAVIG KYIGESARII REMFAYARNH EPCIIFMDEI DALGGRRFSE GTSADREIQR TLMELLNQLD GFDELGKVKI IMATNRPDVL DPALLRPGRL
301: DRKIEIPLPN EQARQEILKI HAAGMAKHGE IDYEAAAKLA EGFNAADLRN ICTEAGMAAI RAERDYAINE DFIKGLRKIM DMKKLESSAD YKADFGKD
001: MSDGDDAARR RTAAVTDYRK KLLHHKELES RVRTARENLR AAKKEFNKTE DDLKSLQSVG QIIGEVLRPL DNERLIVKAS SGPRYVVGCR SKVDKEKLTS
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
Arabidopsis Description
RPT4B26S protease regulatory subunit S10B homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAK9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.