Factsheet for AT5G43010.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035338.1-P	Field mustard	cytosol	97.74	97.74
CDY02428	Canola	cytosol, extracellular	97.74	97.74
CDY25226	Canola	cytosol	97.74	97.74
Bra033655.1-P	Field mustard	cytosol	97.49	97.49
CDX71534	Canola	cytosol	97.49	97.49
CDY22373	Canola	cytosol	97.24	97.24
AT1G45000.1	Thale cress	cytosol	96.74	96.74
KRH61120	Soybean	endoplasmic reticulum	93.73	93.97
KRH51796	Soybean	cytosol	93.73	93.97
KRH05868	Soybean	cytosol, nucleus	93.23	93.23
VIT_18s0001g13090.t01	Wine grape	cytosol	92.98	93.22
KRH15139	Soybean	cytosol, endoplasmic reticulum, nucleus	92.98	92.98
GSMUA_AchrUn_...	Banana	cytosol	92.73	92.27
TraesCS6D01G149500.1	Wheat	cytosol	81.45	90.28
Os02t0199900-01	Rice	nucleus, plasma membrane	90.48	90.25
EES06471	Sorghum	cytosol	90.23	90.0
Zm00001d053649_P002	Maize	cytosol, mitochondrion	90.23	90.0
GSMUA_Achr4P03720_001	Banana	cytosol	89.72	89.95
GSMUA_Achr7P17620_001	Banana	cytosol	92.23	89.76
TraesCS6B01G188500.1	Wheat	cytosol	89.97	89.75
TraesCS6A01G162700.2	Wheat	cytosol, golgi	89.97	89.75
Zm00001d015788_P001	Maize	plasma membrane	89.97	89.75
TraesCS7A01G378600.1	Wheat	cytosol	89.72	89.5
TraesCS7B01G280400.1	Wheat	cytosol, unclear	89.72	89.5
TraesCS7D01G375500.1	Wheat	cytosol	89.72	89.5
Zm00001d046539_P002	Maize	cytosol, mitochondrion	89.22	89.45
Os06t0607800-01	Rice	nucleus	89.22	88.78
EER88627	Sorghum	cytosol	88.47	88.69
HORVU6Hr1G032570.5	Barley	cytosol	87.47	85.33
HORVU7Hr1G090380.3	Barley	cytosol	89.72	82.11
TraesCS7D01G532000.1	Wheat	cytosol	76.44	76.63
TraesCS7A01G545700.1	Wheat	cytosol	75.44	75.63
TraesCS7B01G468900.1	Wheat	cytosol	75.19	75.38
HORVU7Hr1G119300.13	Barley	cytosol	75.69	75.12
KRH00031	Soybean	plastid	50.88	58.84
AT5G19990.1	Thale cress	cytosol	44.11	42.0
AT5G20000.1	Thale cress	cytosol	44.11	42.0
AT1G53750.1	Thale cress	cytosol	41.6	38.97
AT5G58290.1	Thale cress	cytosol	38.85	37.99
AT2G20140.1	Thale cress	cytosol	41.85	37.7
AT4G29040.1	Thale cress	cytosol	41.85	37.7
AT1G09100.1	Thale cress	cytosol	39.1	36.88
AT3G05530.1	Thale cress	cytosol	38.85	36.56
AT1G53780.2	Thale cress	cytosol	41.1	26.45
AT2G03670.1	Thale cress	cytosol	27.32	18.08
AT3G09840.1	Thale cress	cytosol	34.09	16.81
AT5G03340.1	Thale cress	cytosol	34.09	16.79
AT3G53230.1	Thale cress	cytosol	33.83	16.56
AT3G01610.2	Thale cress	nucleus	29.57	14.22
AT1G03000.1	Thale cress	mitochondrion	28.32	12.01
AT3G56690.1	Thale cress	cytosol, plastid	30.33	11.84
AT5G08470.1	Thale cress	cytosol	29.32	10.35

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.4	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	EntrezGene:834316
EntrezGene:841065	UniProt:A0A178UH77	InterPro:AAA+_ATPase	ProteinID:AAF69154.1	ProteinID:AED94900.1	ProteinID:AEE32072.1
EMBL:AF123393	EMBL:AF372945	EMBL:AK220732	ArrayExpress:AT5G43010	EnsemblPlantsGene:AT5G43010	RefSeq:AT5G43010
TAIR:AT5G43010	RefSeq:AT5G43010-TAIR-G	EnsemblPlants:AT5G43010.1	TAIR:AT5G43010.1	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
EMBL:AY062709	EMBL:AY078040	EMBL:AY114673	Unigene:At.6532	ProteinID:BAB09203.1	ncoils:Coil
GO:GO:0000166	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0006139	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0008540	GO:GO:0009056	GO:GO:0009058	GO:GO:0009506
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016787	GO:GO:0017025	GO:GO:0019538
GO:GO:0030163	GO:GO:0030312	GO:GO:0030433	GO:GO:0031595	GO:GO:0031597	GO:GO:0036402
GO:GO:0045899	GO:GO:1901800	RefSeq:NP_175120.1	RefSeq:NP_199115.1	ProteinID:OAO92452.1	ProteinID:OAP11915.1
InterPro:P-loop_NTPase	PFAM:PF00004	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	ScanProsite:PS00674	PANTHER:PTHR23073	PANTHER:PTHR23073:SF58	UniProt:Q9SEI3
Symbol:RPT4A	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR01242	UniParc:UPI00000A301B	SEG:seg

Description

RPT4A26S proteasome regulatory subunit 10B homolog A [Source:UniProtKB/Swiss-Prot;Acc:Q9SEI3]

Coordinates

chr5:-:17248290..17251200

Molecular Weight (calculated)

44819.3 Da

IEP (calculated)

8.422

GRAVY (calculated)

-0.368

Length

399 amino acids

Sequence
(BLAST)

001: MTDVDESVRR RTAAVSEYRK KLLQHKELES RVRTARENLR GAKKEFNKTE DDLKSLQSVG QIIGEVLRPL DNERLIVKAS SGPRYVVGCR SKVDKEKLTS
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDNLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMDILK IHAAGIAKHG EIDYEAIVKL AEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.