Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU6Hr1G087650.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G43010.1 | HORVU6Hr1G087650.1 | AT3G05530.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G545700.1 | Wheat | cytosol | 89.8 | 90.7 |
| TraesCS7D01G532000.1 | Wheat | cytosol | 89.55 | 90.45 |
| TraesCS7B01G468900.1 | Wheat | cytosol | 89.55 | 90.45 |
| Solyc01g109940.2.1 | Tomato | nucleus | 76.87 | 77.64 |
| PGSC0003DMT400079514 | Potato | cytosol | 76.87 | 77.64 |
| KRH51796 | Soybean | cytosol | 76.62 | 77.39 |
| KRH61120 | Soybean | endoplasmic reticulum | 76.62 | 77.39 |
| KRH05868 | Soybean | cytosol, nucleus | 76.37 | 76.94 |
| KRH15139 | Soybean | cytosol, endoplasmic reticulum, nucleus | 76.12 | 76.69 |
| VIT_18s0001g13090.t01 | Wine grape | cytosol | 75.87 | 76.63 |
| VIT_03s0038g04350.t01 | Wine grape | cytosol | 75.87 | 76.44 |
| GSMUA_Achr4P03720_001 | Banana | cytosol | 75.62 | 76.38 |
| GSMUA_AchrUn_... | Banana | cytosol | 76.12 | 76.31 |
| AT1G45000.1 | Thale cress | cytosol | 75.62 | 76.19 |
| CDX71534 | Canola | cytosol | 75.62 | 76.19 |
| Bra033655.1-P | Field mustard | cytosol | 75.62 | 76.19 |
| CDY22373 | Canola | cytosol | 75.37 | 75.94 |
| AT5G43010.1 | Thale cress | cytosol | 75.12 | 75.69 |
| Bra035338.1-P | Field mustard | cytosol | 75.12 | 75.69 |
| CDY02428 | Canola | cytosol, extracellular | 75.12 | 75.69 |
| CDY25226 | Canola | cytosol | 75.12 | 75.69 |
| GSMUA_Achr7P17620_001 | Banana | cytosol | 75.87 | 74.39 |
| HORVU6Hr1G032570.5 | Barley | cytosol | 74.38 | 73.11 |
| HORVU7Hr1G090380.3 | Barley | cytosol | 77.36 | 71.33 |
| Solyc10g054040.1.1 | Tomato | cytosol, unclear | 70.65 | 71.18 |
| CDY20370 | Canola | cytosol | 41.04 | 61.34 |
| KRH51488 | Soybean | mitochondrion | 62.19 | 59.1 |
| CDY39032 | Canola | cytosol | 35.82 | 57.37 |
| CDY39033 | Canola | cytosol | 54.48 | 53.94 |
| KRH00031 | Soybean | plastid | 45.27 | 52.75 |
| HORVU3Hr1G067470.2 | Barley | cytosol | 27.86 | 49.34 |
| CDY20371 | Canola | cytosol, plastid | 53.23 | 48.64 |
| HORVU2Hr1G107280.1 | Barley | cytosol | 40.3 | 43.78 |
| HORVU2Hr1G014000.1 | Barley | cytosol | 41.79 | 40.98 |
| HORVU7Hr1G084550.2 | Barley | cytosol | 41.54 | 39.48 |
| HORVU6Hr1G087650.1 | Barley | cytosol, plasma membrane | 36.82 | 38.54 |
| HORVU6Hr1G083150.1 | Barley | cytosol | 39.8 | 37.56 |
| HORVU6Hr1G036990.7 | Barley | cytosol | 41.79 | 36.36 |
| HORVU7Hr1G032070.1 | Barley | cytosol | 39.55 | 35.81 |
| HORVU2Hr1G014770.2 | Barley | cytosol, plastid | 38.81 | 35.37 |
| HORVU4Hr1G055060.1 | Barley | cytosol | 39.05 | 34.89 |
| Bra008198.1-P | Field mustard | cytosol | 53.98 | 34.55 |
| HORVU6Hr1G049800.1 | Barley | cytosol | 3.98 | 28.57 |
| HORVU3Hr1G095530.3 | Barley | mitochondrion, plastid | 15.67 | 25.1 |
| HORVU1Hr1G091080.1 | Barley | mitochondrion, plastid | 15.42 | 24.7 |
| HORVU0Hr1G038060.2 | Barley | cytosol | 29.85 | 22.68 |
| HORVU2Hr1G086170.2 | Barley | cytosol | 29.6 | 20.91 |
| HORVU0Hr1G006340.1 | Barley | cytosol | 32.09 | 16.37 |
| HORVU0Hr1G013350.2 | Barley | cytosol | 12.44 | 16.23 |
| HORVU3Hr1G029450.1 | Barley | cytosol | 32.34 | 16.09 |
| HORVU4Hr1G072010.4 | Barley | cytosol | 32.59 | 16.07 |
| HORVU3Hr1G029440.1 | Barley | cytosol | 32.34 | 15.97 |
| HORVU4Hr1G071960.2 | Barley | cytosol | 32.09 | 15.79 |
| HORVU1Hr1G060370.1 | Barley | cytosol | 31.59 | 15.74 |
| HORVU1Hr1G060340.2 | Barley | cytosol | 31.59 | 15.62 |
| HORVU1Hr1G049910.1 | Barley | cytosol | 31.59 | 15.6 |
| HORVU2Hr1G011690.1 | Barley | cytosol | 30.35 | 14.81 |
| HORVU7Hr1G002880.2 | Barley | plastid | 28.86 | 14.48 |
| HORVU1Hr1G015310.16 | Barley | cytosol, plastid | 29.85 | 11.94 |
| HORVU2Hr1G104530.9 | Barley | cytosol | 27.11 | 11.94 |
| HORVU4Hr1G016200.10 | Barley | cytosol, plastid | 29.35 | 11.73 |
| HORVU5Hr1G069560.1 | Barley | cytosol | 5.72 | 10.85 |
| HORVU6Hr1G053620.1 | Barley | cytosol | 8.46 | 9.47 |
| HORVU7Hr1G058410.7 | Barley | cytosol, peroxisome | 24.63 | 8.94 |
| HORVU3Hr1G029660.1 | Barley | cytosol, peroxisome | 0.75 | 8.82 |
| HORVU5Hr1G078590.8 | Barley | plastid | 21.89 | 7.79 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:19.2.6.2.1.4 | Gene3D:2.40.50.140 | InterPro:26S_Psome_P45-like | Gene3D:3.40.50.300 | UniProt:A0A287XZN2 |
| InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0030163 | GO:GO:0036402 | GO:GO:1901800 | EnsemblPlantsGene:HORVU7Hr1G119300 | EnsemblPlants:HORVU7Hr1G119300.13 | InterPro:P-loop_NTPase |
| PFAM:PF00004 | ScanProsite:PS00674 | InterPro:PSMC6 | PANTHER:PTHR23073 | PANTHER:PTHR23073:SF59 | SMART:SM00382 |
| SUPFAM:SSF52540 | TIGRFAMs:TIGR01242 | UniParc:UPI000B46CDCA | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:-:649386374..649390199
Molecular Weight (calculated)
44578.2 Da
IEP (calculated)
9.285
GRAVY (calculated)
-0.228
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: DGRTMAAIAD AARRATAVAK YRASLLAFRE HYSLVRAGEE NLKKAKKERE ITDGHVKAFQ CAGQIVGEVL RPVGGERFIV KLRSGPRYLV NCRNKLNKEK
101: LKTGTRVCLD LSTLTIVRVL PREVDPLVFN MLHEDPGNVS FSAVGGLSDQ IREIRETIEL PLMNPELFLR VGITPPKGVL LYGPPGTGKT LLARAVASNI
201: DANFMKVVSS AVIAKFIGES ARIIREMFAY ARNHEPCIIF MDEIDALGGR RFSEGTSADR EIQRTLMELL NQLDGFDELG KVKIIMATNR PDVLDPALLR
301: PGRMDRKIEI PLPNEQARQE ILKIHAAAMA KHGEIDYEAA AKLAEGFNAA DMRNVCTEAG MAAIRAERDY AINEDFIKGV RKLTDVKKLE SSANYKADFS
401: KE
101: LKTGTRVCLD LSTLTIVRVL PREVDPLVFN MLHEDPGNVS FSAVGGLSDQ IREIRETIEL PLMNPELFLR VGITPPKGVL LYGPPGTGKT LLARAVASNI
201: DANFMKVVSS AVIAKFIGES ARIIREMFAY ARNHEPCIIF MDEIDALGGR RFSEGTSADR EIQRTLMELL NQLDGFDELG KVKIIMATNR PDVLDPALLR
301: PGRMDRKIEI PLPNEQARQE ILKIHAAAMA KHGEIDYEAA AKLAEGFNAA DMRNVCTEAG MAAIRAERDY AINEDFIKGV RKLTDVKKLE SSANYKADFS
401: KE
001: MSDGDDAARR RTAAVTDYRK KLLHHKELES RVRTARENLR AAKKEFNKTE DDLKSLQSVG QIIGEVLRPL DNERLIVKAS SGPRYVVGCR SKVDKEKLTS
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
Arabidopsis Description
RPT4B26S protease regulatory subunit S10B homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAK9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.