Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G029660.1 | Barley | cytosol, peroxisome | 4.21 | 100.0 |
| HORVU0Hr1G006340.1 | Barley | cytosol | 97.52 | 100.0 |
| HORVU3Hr1G029440.1 | Barley | cytosol | 99.88 | 99.14 |
| TraesCS3B01G154400.1 | Wheat | cytosol | 93.69 | 96.07 |
| TraesCS3B01G171200.1 | Wheat | cytosol | 92.45 | 94.8 |
| TraesCS3D01G153800.1 | Wheat | cytosol | 79.46 | 94.41 |
| TraesCS1B01G259200.1 | Wheat | cytosol | 92.08 | 94.3 |
| TraesCS3A01G144500.1 | Wheat | cytosol | 62.13 | 94.18 |
| TraesCS3B01G172100.1 | Wheat | cytosol | 92.08 | 94.18 |
| TraesCS1B01G419200.1 | Wheat | cytosol | 91.96 | 94.17 |
| TraesCS1D01G399100.1 | Wheat | cytosol | 91.96 | 94.17 |
| TraesCS3D01G154000.1 | Wheat | cytosol | 91.71 | 94.04 |
| TraesCS3B01G172000.1 | Wheat | cytosol | 91.09 | 93.88 |
| TraesCS1D01G248000.1 | Wheat | cytosol | 91.58 | 93.79 |
| TraesCS3A01G145100.1 | Wheat | cytosol | 91.21 | 93.41 |
| TraesCS3A01G145000.1 | Wheat | cytosol | 80.2 | 93.1 |
| TraesCS3B01G171400.1 | Wheat | cytosol | 83.54 | 92.85 |
| TraesCS3D01G153900.1 | Wheat | cytosol | 90.35 | 92.64 |
| TraesCS3B01G171300.1 | Wheat | cytosol | 82.92 | 91.91 |
| TraesCS6D01G360700.1 | Wheat | cytosol | 82.3 | 90.35 |
| TraesCS1A01G248500.1 | Wheat | cytosol | 66.09 | 89.45 |
| TraesCS5B01G323100.1 | Wheat | cytosol | 64.23 | 89.33 |
| HORVU0Hr1G038060.2 | Barley | cytosol | 55.69 | 85.07 |
| KRG99061 | Soybean | cytosol | 20.92 | 84.5 |
| KRG94277 | Soybean | cytosol | 21.53 | 84.06 |
| EER95525 | Sorghum | cytosol | 81.06 | 83.97 |
| KXG40206 | Sorghum | cytosol | 81.06 | 83.76 |
| VIT_08s0040g01480.t01 | Wine grape | cytosol | 82.43 | 82.63 |
| KRG96011 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 82.05 | 82.05 |
| KRH67721 | Soybean | endoplasmic reticulum, nucleus | 82.05 | 82.05 |
| CDY11249 | Canola | cytosol | 80.94 | 81.95 |
| CDX73996 | Canola | cytosol | 82.05 | 81.95 |
| Bra001297.1-P | Field mustard | cytosol | 82.05 | 81.95 |
| KRH19916 | Soybean | endoplasmic reticulum, mitochondrion | 82.05 | 81.75 |
| PGSC0003DMT400050662 | Potato | cytosol | 81.44 | 81.74 |
| HORVU4Hr1G072010.4 | Barley | cytosol | 82.43 | 81.72 |
| CDY07941 | Canola | cytosol | 81.81 | 81.71 |
| AT3G09840.1 | Thale cress | cytosol | 81.81 | 81.71 |
| CDY41316 | Canola | cytosol, extracellular | 81.81 | 81.6 |
| CDY22207 | Canola | cytosol | 81.81 | 81.6 |
| PGSC0003DMT400027096 | Potato | cytosol | 81.56 | 81.56 |
| Solyc10g084050.1.1 | Tomato | cytosol, nucleus, plastid, unclear | 81.56 | 81.56 |
| Solyc11g069720.1.1 | Tomato | cytosol, extracellular, nucleus, plastid | 81.19 | 81.49 |
| AT5G03340.1 | Thale cress | cytosol | 81.68 | 81.48 |
| Bra034089.1-P | Field mustard | cytosol | 81.68 | 81.48 |
| CDY13308 | Canola | cytosol | 81.68 | 81.48 |
| AT3G53230.1 | Thale cress | cytosol | 82.18 | 81.47 |
| KRH32530 | Soybean | endoplasmic reticulum, mitochondrion | 81.93 | 81.43 |
| Solyc06g074980.2.1 | Tomato | nucleus | 81.06 | 81.37 |
| PGSC0003DMT400031321 | Potato | cytosol | 81.06 | 81.37 |
| Bra003123.1-P | Field mustard | cytosol | 81.56 | 81.36 |
| CDY54618 | Canola | cytosol | 81.31 | 81.31 |
| KRH26511 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 81.19 | 81.29 |
| HORVU4Hr1G071960.2 | Barley | cytosol | 82.18 | 81.27 |
| KRH22853 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 81.06 | 81.16 |
| Bra029795.1-P | Field mustard | cytosol | 81.19 | 81.09 |
| CDY41581 | Canola | cytosol | 81.06 | 81.06 |
| PGSC0003DMT400055513 | Potato | cytosol | 80.69 | 80.79 |
| KRH30601 | Soybean | cytosol | 80.32 | 80.52 |
| CDX80862 | Canola | cytosol, plastid | 80.57 | 80.47 |
| HORVU1Hr1G049910.1 | Barley | cytosol | 80.94 | 80.34 |
| Bra006978.1-P | Field mustard | cytosol | 80.45 | 80.15 |
| HORVU1Hr1G060370.1 | Barley | cytosol | 79.83 | 79.93 |
| Solyc09g008070.2.1 | Tomato | cytosol, unclear | 79.83 | 79.83 |
| HORVU1Hr1G060340.2 | Barley | cytosol | 80.07 | 79.58 |
| VIT_06s0061g00340.t01 | Wine grape | cytosol | 75.25 | 79.48 |
| CDX78154 | Canola | cytosol | 72.9 | 79.17 |
| CDX73571 | Canola | cytosol | 72.28 | 78.6 |
| KRH25081 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 70.05 | 78.18 |
| CDX67563 | Canola | cytosol | 79.58 | 73.15 |
| GSMUA_Achr3P00250_001 | Banana | cytosol | 17.7 | 72.96 |
| HORVU5Hr1G069560.1 | Barley | cytosol | 18.56 | 70.75 |
| HORVU6Hr1G053620.1 | Barley | cytosol | 30.57 | 68.8 |
| HORVU2Hr1G011690.1 | Barley | cytosol | 64.48 | 63.23 |
| KRH45638 | Soybean | cytosol | 25.0 | 62.93 |
| Bra005733.1-P | Field mustard | cytosol | 81.56 | 59.69 |
| HORVU2Hr1G086170.2 | Barley | cytosol | 28.96 | 41.12 |
| HORVU3Hr1G067470.2 | Barley | cytosol | 10.77 | 38.33 |
| HORVU6Hr1G049800.1 | Barley | cytosol | 2.35 | 33.93 |
| HORVU6Hr1G083150.1 | Barley | cytosol | 17.2 | 32.63 |
| HORVU7Hr1G119300.13 | Barley | cytosol | 16.09 | 32.34 |
| HORVU6Hr1G032570.5 | Barley | cytosol | 16.34 | 32.27 |
| HORVU2Hr1G107280.1 | Barley | cytosol | 14.73 | 32.16 |
| HORVU6Hr1G087650.1 | Barley | cytosol, plasma membrane | 15.1 | 31.77 |
| HORVU7Hr1G032070.1 | Barley | cytosol | 17.33 | 31.53 |
| HORVU2Hr1G014000.1 | Barley | cytosol | 15.84 | 31.22 |
| HORVU7Hr1G090380.3 | Barley | cytosol | 16.71 | 30.96 |
| HORVU7Hr1G002880.2 | Barley | plastid | 30.69 | 30.96 |
| HORVU0Hr1G013350.2 | Barley | cytosol | 10.77 | 28.25 |
| HORVU7Hr1G084550.2 | Barley | cytosol | 14.6 | 27.9 |
| HORVU4Hr1G055060.1 | Barley | cytosol | 15.1 | 27.11 |
| HORVU2Hr1G014770.2 | Barley | cytosol, plastid | 14.36 | 26.3 |
| HORVU4Hr1G016200.10 | Barley | cytosol, plastid | 32.55 | 26.14 |
| HORVU1Hr1G015310.16 | Barley | cytosol, plastid | 32.05 | 25.77 |
| HORVU6Hr1G036990.7 | Barley | cytosol | 14.6 | 25.54 |
| HORVU2Hr1G104530.9 | Barley | cytosol | 26.61 | 23.55 |
| HORVU3Hr1G095530.3 | Barley | mitochondrion, plastid | 6.31 | 20.32 |
| HORVU1Hr1G091080.1 | Barley | mitochondrion, plastid | 6.06 | 19.52 |
| HORVU7Hr1G058410.7 | Barley | cytosol, peroxisome | 23.02 | 16.8 |
| HORVU5Hr1G078590.8 | Barley | plastid | 23.02 | 16.46 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:19.2.4.2.1 | Gene3D:2.40.40.20 | Gene3D:3.10.330.10 | Gene3D:3.40.50.300 | UniProt:A0A287KKW2 |
| InterPro:AAA+_ATPase | InterPro:AAA_ATPase_CDC48 | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | InterPro:Asp_de-COase-like_dom_sf | InterPro:CDC48_domain_2-like_sf |
| InterPro:CDC4_N-term_subdom | InterPro:Cdc48_dom2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0016787 | EnsemblPlantsGene:HORVU3Hr1G029450 | EnsemblPlants:HORVU3Hr1G029450.1 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| PFAM:PF02359 | PFAM:PF02933 | ScanProsite:PS00674 | PANTHER:PTHR23077 | PANTHER:PTHR23077:SF122 | SMART:SM00382 |
| SMART:SM01072 | SMART:SM01073 | SUPFAM:SSF50692 | SUPFAM:SSF52540 | SUPFAM:SSF54585 | TIGRFAMs:TIGR01243 |
| UniParc:UPI000B46BAE6 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:136087296..136089722
Molecular Weight (calculated)
89736.1 Da
IEP (calculated)
5.069
GRAVY (calculated)
-0.354
Length
808 amino acids
Sequence
(BLAST)
(BLAST)
001: YNESNNPLET QRVHHRELNT MAITASSKKA ANRLVVEDAS TNDDNSVCTL HPDTMEKLSL FKGDTVLLKG KRRHSTVCMA LPDDTCEEHK MRINKVARSN
101: LRVRIADVVS VHLCHDVKYA RRVHILPLDD TVEGIAGNLF DAYLKPYFVD AFRPVHKGDL FLVRGGMRSV EFKVMEIDPA ADYCIVMPDT EIFCEGEPVK
201: REDEERLDDV GYDDVGGMGK PLTQIRELVE LPLRHPQIFK SIGVKPPKGI LLYGPPGSGK TLIARAVANE TGAFFFLING PEIMSKMAGE SESNLRKAFE
301: EAEKNAPSII FIDEIDSIAP NREKTHGEVE RRIVSQLLTL MDGMKARAHV IVMGATNRPN SIDPALRRFG RFDREIDIGV PDEVGRLEVL RIHTKNMKLD
401: EEVNLEVIAK DTHGYVGADL AALCTEAALQ CIREKMDVID LEDDTIDAEI LNSMAVTNDH LKTALVGTNP SALRETVVEV PNVSWNDVGG LDGVKRELQE
501: TVQYPVEHPE KFEKFGMSPS KGVLFYGPPG CGKTLLAKAI ANECQANFIS IKGPELLTMW FGESEANVRE IFDKARQSAP CVLFFDELDS IATQRGGRMG
601: DAGGAADRVL NQLLTEMDGM NAKKTVFIIG ATNRPDIIDS ALLRPGRLDQ LIYIPLPDEA SRHQIFKACL RKSPVAKDVD LGALARFTAG FSGADITEIC
701: QRACKYAIRE DIEKDMERQR MGQDTMEPDG GQEEEAAEIK AAHFEESMKY ARRSVSDADV RKYRAFAQTL QQSRGFGTEF RFPAQPHAAE AAVHTSAAAD
801: EDEDDLYK
101: LRVRIADVVS VHLCHDVKYA RRVHILPLDD TVEGIAGNLF DAYLKPYFVD AFRPVHKGDL FLVRGGMRSV EFKVMEIDPA ADYCIVMPDT EIFCEGEPVK
201: REDEERLDDV GYDDVGGMGK PLTQIRELVE LPLRHPQIFK SIGVKPPKGI LLYGPPGSGK TLIARAVANE TGAFFFLING PEIMSKMAGE SESNLRKAFE
301: EAEKNAPSII FIDEIDSIAP NREKTHGEVE RRIVSQLLTL MDGMKARAHV IVMGATNRPN SIDPALRRFG RFDREIDIGV PDEVGRLEVL RIHTKNMKLD
401: EEVNLEVIAK DTHGYVGADL AALCTEAALQ CIREKMDVID LEDDTIDAEI LNSMAVTNDH LKTALVGTNP SALRETVVEV PNVSWNDVGG LDGVKRELQE
501: TVQYPVEHPE KFEKFGMSPS KGVLFYGPPG CGKTLLAKAI ANECQANFIS IKGPELLTMW FGESEANVRE IFDKARQSAP CVLFFDELDS IATQRGGRMG
601: DAGGAADRVL NQLLTEMDGM NAKKTVFIIG ATNRPDIIDS ALLRPGRLDQ LIYIPLPDEA SRHQIFKACL RKSPVAKDVD LGALARFTAG FSGADITEIC
701: QRACKYAIRE DIEKDMERQR MGQDTMEPDG GQEEEAAEIK AAHFEESMKY ARRSVSDADV RKYRAFAQTL QQSRGFGTEF RFPAQPHAAE AAVHTSAAAD
801: EDEDDLYK
001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE
Arabidopsis Description
CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.