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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • plasma membrane 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plasma membrane, plastid
ChloroP:plastid
MultiLoc:plasma membrane
TargetP:mitochondrion
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G006340.1
HORVU0Hr1G021050.5
HORVU1Hr1G064780.1
HORVU2Hr1G080020.6
HORVU3Hr1G029440.1
HORVU3Hr1G029450.1
HORVU3Hr1G068000.2
HORVU3Hr1G068010.1
HORVU3Hr1G068020.2
HORVU3Hr1G090040.1
HORVU4Hr1G014760.3
HORVU4Hr1G072020.1
HORVU6Hr1G049080.7
HORVU7Hr1G068990.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G34210.1 HORVU1Hr1G064780.1 AT5G48380.1 19616764
AT1G34210.1 HORVU3Hr1G090040.1 AT5G48380.1 19616764
AT1G34210.1 HORVU4Hr1G014760.3 AT5G48380.1 19616764
AT1G71830.1 HORVU2Hr1G080020.6 AT1G71830.1 11397085
AT1G71830.1 HORVU6Hr1G049080.7 AT1G71830.1 11397085
AT1G71830.1 HORVU7Hr1G068990.2 AT1G71830.1 11397085
AT1G71830.1 HORVU2Hr1G080020.6 AT1G71830.1 16621602
AT1G71830.1 HORVU6Hr1G049080.7 AT1G71830.1 16621602
AT1G71830.1 HORVU7Hr1G068990.2 AT1G71830.1 16621602
AT1G71830.1 HORVU0Hr1G021050.5 AT2G33500.1 16473966
AT1G71830.1 HORVU0Hr1G006340.1 AT3G09840.1 15592873
AT1G71830.1 HORVU3Hr1G029440.1 AT3G09840.1 15592873
AT1G71830.1 HORVU3Hr1G029450.1 AT3G09840.1 15592873
AT1G71830.1 HORVU0Hr1G006340.1 AT3G09840.1 16473966
AT1G71830.1 HORVU3Hr1G029440.1 AT3G09840.1 16473966
AT1G71830.1 HORVU3Hr1G029450.1 AT3G09840.1 16473966
AT1G71830.1 HORVU0Hr1G006340.1 AT3G09840.1 16621602
AT1G71830.1 HORVU3Hr1G029440.1 AT3G09840.1 16621602
AT1G71830.1 HORVU3Hr1G029450.1 AT3G09840.1 16621602
AT1G71830.1 HORVU0Hr1G006340.1 AT3G09840.1 17693538
AT1G71830.1 HORVU3Hr1G029440.1 AT3G09840.1 17693538
AT1G71830.1 HORVU3Hr1G029450.1 AT3G09840.1 17693538
AT1G71830.1 HORVU4Hr1G072020.1 AT3G54840.1 16621602
AT1G71830.1 HORVU3Hr1G068000.2 AT4G39400.1 16473966
AT1G71830.1 HORVU3Hr1G068010.1 AT4G39400.1 16473966
AT1G71830.1 HORVU3Hr1G068020.2 AT4G39400.1 16473966
AT2G13790.1 HORVU3Hr1G068000.2 AT4G39400.1 17600708
AT2G13790.1 HORVU3Hr1G068010.1 AT4G39400.1 17600708
AT2G13790.1 HORVU3Hr1G068020.2 AT4G39400.1 17600708
AT2G13790.1 HORVU1Hr1G064780.1 AT5G48380.1 19616764
AT2G13790.1 HORVU3Hr1G090040.1 AT5G48380.1 19616764
AT2G13790.1 HORVU4Hr1G014760.3 AT5G48380.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G293300.3 Wheat plasma membrane 90.95 98.55
TraesCS7D01G291200.3 Wheat plasma membrane 90.8 98.55
TraesCS7B01G182300.1 Wheat plasma membrane 90.65 98.23
Os08t0174700-01 Rice plasma membrane 87.39 94.39
KXG24562 Sorghum plasma membrane 86.05 91.92
Zm00001d024430_P002 Maize plasma membrane 86.5 91.38
GSMUA_Achr7P17210_001 Banana cytosol 64.84 88.64
KRG91762 Soybean plasma membrane 80.56 87.02
KRH35013 Soybean plasma membrane 80.42 86.86
VIT_18s0164g00070.t01 Wine grape plasma membrane 80.12 86.54
VIT_07s0031g01410.t01 Wine grape plasma membrane 80.12 86.54
KRH70218 Soybean endoplasmic reticulum 79.67 86.06
GSMUA_Achr2P14850_001 Banana plastid 79.67 85.92
GSMUA_AchrUn_... Banana plasma membrane 79.97 85.56
HORVU6Hr1G049080.7 Barley plasma membrane 79.67 85.51
GSMUA_Achr10P... Banana plasma membrane 78.93 84.98
GSMUA_Achr7P11620_001 Banana plasma membrane 81.01 84.91
Solyc04g072570.2.1 Tomato extracellular 78.78 84.42
Bra003911.1-P Field mustard plasma membrane 71.36 84.24
CDY36679 Canola plasma membrane 77.3 83.9
Zm00001d049480_P005 Maize plasma membrane 81.9 83.76
AT1G34210.1 Thale cress plasma membrane 77.74 83.44
CDX96350 Canola plasma membrane 77.15 83.2
AT1G71830.1 Thale cress plasma membrane 76.85 82.88
CDX72833 Canola plasma membrane 76.85 82.88
KRH10503 Soybean cytosol, plastid 56.97 82.05
PGSC0003DMT400032797 Potato cytosol, plasma membrane, plastid 62.61 81.47
Bra037006.1-P Field mustard mitochondrion 57.86 81.42
PGSC0003DMT400070819 Potato plasma membrane 76.26 81.07
PGSC0003DMT400045607 Potato cytosol, plasma membrane, plastid 63.06 80.95
Bra016112.1-P Field mustard plasma membrane 71.22 79.08
KRH43924 Soybean plasma membrane 72.26 79.06
Solyc01g104970.2.1 Tomato plasma membrane 72.26 79.06
Solyc10g047140.1.1 Tomato plasma membrane 72.11 79.02
CDX72403 Canola plasma membrane 70.18 78.44
CDY46116 Canola plasma membrane 70.18 78.44
CDY45042 Canola plasma membrane 71.22 78.43
CDX68975 Canola plasma membrane 71.22 78.05
CDX75351 Canola plasma membrane 71.22 77.92
Bra034562.1-P Field mustard plasma membrane 65.43 77.92
VIT_12s0055g01160.t01 Wine grape plasma membrane 70.47 77.87
Bra011439.1-P Field mustard plasma membrane 59.79 77.5
GSMUA_Achr10P... Banana mitochondrion 82.64 76.83
HORVU2Hr1G080020.6 Barley cytosol 79.67 75.85
VIT_12s0055g01280.t01 Wine grape plasma membrane 57.12 75.05
KRH58311 Soybean plasma membrane 67.8 73.59
AT4G33430.2 Thale cress plasma membrane 71.81 73.11
CDY28301 Canola plasma membrane 42.88 72.8
AT2G13790.1 Thale cress plasma membrane 66.32 72.1
CDX68299 Canola plasma membrane 74.78 71.09
Bra032128.1-P Field mustard cytosol 51.04 70.64
CDX93126 Canola plasma membrane 63.65 70.33
CDX89615 Canola plasma membrane 63.5 70.16
AT2G13800.3 Thale cress plasma membrane 62.17 69.72
CDY48450 Canola plasma membrane 62.61 68.95
Bra041056.1-P Field mustard plasma membrane 52.82 68.86
VIT_12s0055g01150.t01 Wine grape plasma membrane 60.83 67.43
Bra032125.1-P Field mustard plasma membrane 53.12 66.67
CDX71165 Canola plasma membrane 60.83 66.34
KRH42193 Soybean plasma membrane 60.39 66.07
KRH58312 Soybean plasma membrane 59.64 65.37
CDY39690 Canola cytosol 58.31 64.74
Bra013136.1-P Field mustard plasma membrane 51.48 60.03
HORVU6Hr1G074570.6 Barley cytosol 31.9 59.72
HORVU4Hr1G029640.2 Barley cytosol 21.96 59.44
HORVU7Hr1G083870.7 Barley cytosol 16.02 52.68
VIT_12s0121g00310.t01 Wine grape cytosol, mitochondrion 23.15 52.53
HORVU6Hr1G093140.1 Barley mitochondrion, plastid 20.92 51.65
HORVU7Hr1G043030.2 Barley plasma membrane 47.77 51.52
HORVU3Hr1G016240.5 Barley plasma membrane 47.92 50.95
HORVU1Hr1G006020.20 Barley endoplasmic reticulum, plasma membrane 17.8 48.78
HORVU7Hr1G028160.13 Barley plasma membrane 42.88 47.38
HORVU6Hr1G072620.29 Barley plasma membrane 48.22 47.1
HORVU3Hr1G073960.5 Barley plastid 47.48 43.9
HORVU7Hr1G097930.4 Barley plasma membrane, plastid 44.96 42.74
HORVU7Hr1G044510.5 Barley cytosol 34.12 38.53
HORVU1Hr1G025280.2 Barley mitochondrion, plasma membrane, plastid, vacuole 39.17 36.82
HORVU3Hr1G033790.1 Barley golgi, plasma membrane 18.25 35.34
HORVU4Hr1G060740.1 Barley plasma membrane 29.82 34.07
HORVU5Hr1G000980.2 Barley plastid 25.82 25.89
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.3.2.1.2MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A287WS77GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005102GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464
GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719
GO:GO:0009729GO:GO:0009742GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0042803EnsemblPlantsGene:HORVU7Hr1G068990EnsemblPlants:HORVU7Hr1G068990.2
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfPFAM:PF00069
PFAM:PF08263ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF494
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSInterPro:SERKSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI000B482431SEG:seg::
Description
No Description!
Coordinates
chrchr7H:-:366099333..366114129
Molecular Weight (calculated)
73704.2 Da
IEP (calculated)
6.982
GRAVY (calculated)
-0.221
Length
674 amino acids
Sequence
(BLAST)
001: ELGRTRGSKR TGGGAKSCGT NLRFYRRKAA SAPLRGVECA AAAAAVGSRA AAMGVPPWAI WALLLLHPAA RVLANTEGDA LHSLRTNLND PNNVLQSWDP
101: TLVNPCTWFH VTCNNDNSVI RVDLGNAALF GTLVPQLGQL RNLQYLELYS NNISGTIPSE LGNLTNLVSL DLYLNNFTGP IPDSLGNLLK LRFLRLNNNS
201: LSGTIPKSLT AITALQVLDL SNNKLSGEVP STGSFSLFTP ISFGNNPALC GPGTSKPCPG APPFSPPPPY NPPTPEQSPG SSSSSTGAIA GGVAAGAALL
301: FAIPAIGFAY WRRRKPQEHF FDVPAEEDPE VHLGQLKRFS LRELQVATDT FSNRNILGRG GFGKVYKGRL TDGTLVAVKR LKEERTPGGE LQFQTEVEMI
401: SMAVHRNLLR LRGFCMTPTE RLLVYPYMAN GSVASRLRER GPAEPPLDWQ TRRRIALGSA RGLSYLHDHC DPKIIHRDVK AANILLDEDF EAVVGDFGLA
501: KLMDYKDTHV TTAVRGTIGH IAPEYLSTGK SSEKTDVFGY GIMLLELITG QRAFDLARLA NDDDVMLLDW VKGLLKERRL EMLVDPDLQT NYIDVEVESL
601: IQVALLCTQG SPMERPKMSE VVRMLEGDGL AERWDEWQKV EVSRQEVELG PHRNSEWIVD STDNLHAVEL SGPR
Best Arabidopsis Sequence Match ( AT1G34210.2 )
(BLAST)
001: MGRKKFEAFG FVCLISLLLL FNSLWLASSN MEGDALHSLR ANLVDPNNVL QSWDPTLVNP CTWFHVTCNN ENSVIRVDLG NADLSGQLVP QLGQLKNLQY
101: LELYSNNITG PVPSDLGNLT NLVSLDLYLN SFTGPIPDSL GKLFKLRFLR LNNNSLTGPI PMSLTNIMTL QVLDLSNNRL SGSVPDNGSF SLFTPISFAN
201: NLDLCGPVTS RPCPGSPPFS PPPPFIPPPI VPTPGGYSAT GAIAGGVAAG AALLFAAPAL AFAWWRRRKP QEFFFDVPAE EDPEVHLGQL KRFSLRELQV
301: ATDSFSNKNI LGRGGFGKVY KGRLADGTLV AVKRLKEERT PGGELQFQTE VEMISMAVHR NLLRLRGFCM TPTERLLVYP YMANGSVASC LRERPPSQLP
401: LAWSIRQQIA LGSARGLSYL HDHCDPKIIH RDVKAANILL DEEFEAVVGD FGLARLMDYK DTHVTTAVRG TIGHIAPEYL STGKSSEKTD VFGYGIMLLE
501: LITGQRAFDL ARLANDDDVM LLDWVKGLLK EKKLEMLVDP DLQSNYTEAE VEQLIQVALL CTQSSPMERP KMSEVVRMLE GDGLAEKWDE WQKVEVLRQE
601: VELSSHPTSD WILDSTDNLH AMELSGPR
Arabidopsis Description
SERK2Somatic embryogenesis receptor kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIC7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.