Factsheet for Bra041056.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001255.1-P
Bra006366.1-P
Bra010684.1-P
Bra011862.1-P
Bra033615.1-P
Bra040380.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G13790.1	Bra010684.1-P	AT4G39400.1	17600708
AT2G13790.1	Bra011862.1-P	AT4G39400.1	17600708
AT2G13790.1	Bra033615.1-P	AT4G39400.1	17600708
AT2G13790.1	Bra001255.1-P	AT5G48380.1	19616764
AT2G13790.1	Bra006366.1-P	AT5G48380.1	19616764
AT2G13790.1	Bra040380.1-P	AT5G48380.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48450	Canola	plasma membrane	99.42	83.99
CDX71165	Canola	plasma membrane	98.45	82.36
Bra037006.1-P	Field mustard	mitochondrion	67.89	73.28
Bra011439.1-P	Field mustard	plasma membrane	73.11	72.69
AT2G13790.1	Thale cress	plasma membrane	83.95	70.0
Bra032128.1-P	Field mustard	cytosol	64.8	68.79
Bra013136.1-P	Field mustard	plasma membrane	76.21	68.17
Bra034562.1-P	Field mustard	plasma membrane	73.11	66.78
GSMUA_Achr7P17210_001	Banana	cytosol	63.06	66.13
Bra032125.1-P	Field mustard	plasma membrane	68.67	66.11
AT2G13800.3	Thale cress	plasma membrane	76.21	65.56
PGSC0003DMT400032797	Potato	cytosol, plasma membrane, plastid	64.99	64.86
PGSC0003DMT400045607	Potato	cytosol, plasma membrane, plastid	65.38	64.38
Solyc10g047140.1.1	Tomato	plasma membrane	74.47	62.6
Bra003911.1-P	Field mustard	plasma membrane	68.86	62.35
Solyc01g104970.2.1	Tomato	plasma membrane	73.69	61.85
VIT_12s0055g01160.t01	Wine grape	plasma membrane	71.76	60.82
KRH58311	Soybean	plasma membrane	70.79	58.94
VIT_12s0055g01280.t01	Wine grape	plasma membrane	58.22	58.67
GSMUA_Achr10P...	Banana	plasma membrane	70.79	58.47
TraesCS6D01G186900.2	Wheat	plasma membrane	67.89	58.11
Os08t0174700-01	Rice	plasma membrane	70.02	58.01
TraesCS6A01G203600.2	Wheat	cytosol	68.09	57.8
GSMUA_AchrUn_...	Banana	plasma membrane	70.21	57.62
GSMUA_Achr2P14850_001	Banana	plastid	69.63	57.6
TraesCS7A01G293300.3	Wheat	plasma membrane	69.05	57.4
TraesCS7D01G291200.3	Wheat	plasma membrane	68.86	57.33
EES12285	Sorghum	plasma membrane	68.86	57.23
KXG24562	Sorghum	plasma membrane	69.83	57.21
TraesCS7B01G182300.1	Wheat	plasma membrane	68.67	57.07
EES07030	Sorghum	plasma membrane	68.86	56.87
TraesCS2B01G340700.1	Wheat	plasma membrane	68.86	56.78
Zm00001d016928_P010	Maize	plasma membrane	68.67	56.71
Os04t0457800-01	Rice	plasma membrane	68.86	56.69
Zm00001d050868_P004	Maize	plasma membrane	68.28	56.66
Zm00001d025580_P001	Maize	plasma membrane	68.09	56.59
TraesCS2D01G321400.1	Wheat	mitochondrion	68.47	56.46
TraesCS2A01G343100.1	Wheat	mitochondrion, plasma membrane	68.47	56.46
TraesCS6B01G223700.3	Wheat	plasma membrane	68.47	56.37
HORVU6Hr1G049080.7	Barley	plasma membrane	68.47	56.37
GSMUA_Achr7P11620_001	Banana	plasma membrane	70.02	56.3
Zm00001d024430_P002	Maize	plasma membrane	69.44	56.27
Bra016112.1-P	Field mustard	plasma membrane	65.18	55.52
Zm00001d049480_P005	Maize	plasma membrane	69.05	54.17
HORVU7Hr1G068990.2	Barley	mitochondrion	68.86	52.82
KRH42193	Soybean	plasma membrane	62.67	52.6
KRH58312	Soybean	plasma membrane	60.93	51.22
GSMUA_Achr10P...	Banana	mitochondrion	70.6	50.34
HORVU2Hr1G080020.6	Barley	cytosol	68.67	50.14
Bra025145.1-P	Field mustard	plasma membrane	50.1	48.23
Bra031479.1-P	Field mustard	endoplasmic reticulum, plasma membrane	46.81	44.49
Os06t0225300-01	Rice	plasma membrane	53.0	44.48
Bra024369.1-P	Field mustard	plasma membrane	47.97	44.13
Bra028592.1-P	Field mustard	plasma membrane	50.48	42.72
Bra038656.1-P	Field mustard	cytosol	46.62	41.62
Bra008659.1-P	Field mustard	plasma membrane	50.1	40.85
Bra032133.1-P	Field mustard	plasma membrane	47.97	38.93
Bra024069.1-P	Field mustard	plasma membrane	47.39	38.52
Bra025056.1-P	Field mustard	plasma membrane	44.1	37.07
Bra006335.1-P	Field mustard	plasma membrane	48.55	36.97
Bra035044.1-P	Field mustard	plasma membrane, vacuole	23.98	35.33
Bra011200.1-P	Field mustard	plastid	34.24	33.02
Bra023017.1-P	Field mustard	plasma membrane	29.59	28.39
Bra005319.1-P	Field mustard	plasma membrane	26.89	28.37
Bra010115.1-P	Field mustard	plasma membrane	30.75	27.23
Bra035884.1-P	Field mustard	plasma membrane	30.75	26.41
Bra017307.1-P	Field mustard	plasma membrane	28.43	25.0

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:11.3.2.1.2	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra041056	EnsemblPlants:Bra041056.1
EnsemblPlants:Bra041056.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005102	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	UniProt:M4FIX7
PFAM:PF00069	PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:SERK	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000253EC37	SEG:seg	:

Description

AT2G13790 (E=7e-185) ATSERK4, SERK4, BKK1 | SERK4 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4); protein binding / protein kinase/ transmembrane receptor protein serine/threonine kinase

Coordinates

chrScaffold000431:-:3137..7559

Molecular Weight (calculated)

57160.4 Da

IEP (calculated)

5.173

GRAVY (calculated)

-0.219

Length

517 amino acids

Sequence
(BLAST)

001: MEQQQGPSLR SLTSLILLFV LLLRAAGNPE GDALYELKKS LVDDPNSVLQ SWDATLVSPC TWFHITCNSE NSVIRVDIAN NGLSGDIPVN GSFTLFTPIS
101: FANNSLRPLP DPPSTSNSPP QPPPGKKTTT AIAIGAAAGA AILCAGPAIA LAWWLRSKAQ DRFVDVPGEE DPEVHLGQLR RFSLRELLVA TDNFSNKNVL
201: GRGGFGKVYK GRLANGKLVA VKRLKEERTM GGELQFQTEV EMISLAVHRN LLRLHGFCMT PTERLLVYPY MCNGSVASCL RESHEGNPAL DWPKRKHIAL
301: GAARGLAYLH DHCDQKIIHR DVKAANILLD ENFEAVVGDF GLAKLMNYNE SHVTTAVRGT IGHIAPEYLS TGKSSEKTDV FGYGVMLLEL ITGQKAFDLA
401: RLANDDDIML LDWVKEVLKE KKLESLVDAG LEGKYVDKEV EQLIQMALLC TQSSSLERPN MSEVVRMLEG DGLAEKWEEW EKEEMLTDDF NYPHADINWL
501: IPESLSHIEN DYPSGPR

Best Arabidopsis Sequence Match ( AT2G13790.1 )
(BLAST)

001: MTSSKMEQRS LLCFLYLLLL FNFTLRVAGN AEGDALTQLK NSLSSGDPAN NVLQSWDATL VTPCTWFHVT CNPENKVTRV DLGNAKLSGK LVPELGQLLN
101: LQYLELYSNN ITGEIPEELG DLVELVSLDL YANSISGPIP SSLGKLGKLR FLRLNNNSLS GEIPMTLTSV QLQVLDISNN RLSGDIPVNG SFSLFTPISF
201: ANNSLTDLPE PPPTSTSPTP PPPSGGQMTA AIAGGVAAGA ALLFAVPAIA FAWWLRRKPQ DHFFDVPAEE DPEVHLGQLK RFTLRELLVA TDNFSNKNVL
301: GRGGFGKVYK GRLADGNLVA VKRLKEERTK GGELQFQTEV EMISMAVHRN LLRLRGFCMT PTERLLVYPY MANGSVASCL RERPEGNPAL DWPKRKHIAL
401: GSARGLAYLH DHCDQKIIHR DVKAANILLD EEFEAVVGDF GLAKLMNYND SHVTTAVRGT IGHIAPEYLS TGKSSEKTDV FGYGVMLLEL ITGQKAFDLA
501: RLANDDDIML LDWVKEVLKE KKLESLVDAE LEGKYVETEV EQLIQMALLC TQSSAMERPK MSEVVRMLEG DGLAERWEEW QKEEMPIHDF NYQAYPHAGT
601: DWLIPYSNSL IENDYPSGPR

Arabidopsis Description

SERK4Somatic embryogenesis receptor kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKG5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.