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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:secretory
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra003911.1-P
Bra016112.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G48380.1 Bra003911.1-P AT1G71830.1 19616764
AT5G48380.1 Bra016112.1-P AT1G71830.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07991 Canola plasma membrane 93.82 93.82
Bra040380.1-P Field mustard extracellular 60.23 66.38
TraesCS3D01G395600.1 Wheat endoplasmic reticulum, vacuole 34.75 41.28
TraesCS3B01G433700.1 Wheat plasma membrane 37.45 36.74
TraesCS3D01G395700.1 Wheat plasma membrane 37.84 36.43
TraesCS3D01G395900.1 Wheat extracellular, golgi, plasma membrane 35.52 36.36
TraesCS3A01G401300.1 Wheat cytosol 33.59 36.25
TraesCS3B01G433800.1 Wheat extracellular 31.27 36.0
TraesCS3D01G396100.1 Wheat plasma membrane 36.68 35.71
TraesCS3D01G395100.1 Wheat extracellular, plasma membrane 35.91 35.63
TraesCS3B01G434000.1 Wheat plasma membrane 35.91 35.63
TraesCS3A01G400700.1 Wheat extracellular, plasma membrane 36.68 35.58
TraesCS3B01G434200.1 Wheat plasma membrane 37.07 35.16
Os01t0892300-01 Rice extracellular, golgi, plasma membrane 37.84 35.13
TraesCS3A01G400800.1 Wheat extracellular 35.91 34.96
HORVU3Hr1G090040.1 Barley extracellular, plasma membrane 33.59 34.8
TraesCS3A01G401100.1 Wheat extracellular, plasma membrane 38.22 34.49
Zm00001d039672_P001 Maize plasma membrane 33.98 34.38
TraesCS3A01G400900.1 Wheat extracellular, plasma membrane 37.84 34.27
KRH66279 Soybean cytosol 23.94 33.88
TraesCS3D01G395400.1 Wheat extracellular, golgi, plasma membrane 32.05 33.88
KXG33866 Sorghum cytosol 32.05 33.74
TraesCS3A01G401200.1 Wheat plasma membrane 34.75 33.33
TraesCS7A01G410600.1 Wheat extracellular 33.2 32.82
TraesCS3B01G434100.1 Wheat plasma membrane 33.98 32.59
Os01t0891601-01 Rice extracellular, golgi, plasma membrane 32.43 32.56
TraesCS3B01G433900.1 Wheat extracellular, mitochondrion, nucleus, plasma membrane 38.22 32.04
Bra006366.1-P Field mustard mitochondrion 39.77 31.69
TraesCS3A01G401000.1 Wheat cytosol 19.69 29.65
Os01t0891700-01 Rice plasma membrane 34.75 29.41
PGSC0003DMT400070667 Potato cytosol 23.55 27.6
Bra037831.1-P Field mustard extracellular, plasma membrane, vacuole 28.19 26.74
TraesCS3D01G395800.1 Wheat plastid 34.75 25.35
Bra029968.1-P Field mustard extracellular 26.64 24.73
VIT_05s0094g01290.t01 Wine grape mitochondrion 10.81 21.88
KRH21657 Soybean cytosol 30.12 18.44
PGSC0003DMT400070664 Potato cytosol, plasma membrane, plastid 23.17 16.26
KRH66278 Soybean cytosol 28.57 16.12
Zm00001d007277_P001 Maize plasma membrane 36.29 16.01
AT5G48380.1 Thale cress plasma membrane 37.84 15.81
KRH00983 Soybean nucleus, plasma membrane 37.07 15.53
Os05t0414700-01 Rice plasma membrane 36.29 15.49
PGSC0003DMT400075495 Potato plasma membrane 35.14 15.48
PGSC0003DMT400075494 Potato plasma membrane 34.75 15.46
EES09539 Sorghum plasma membrane 35.91 15.4
KRH40243 Soybean plasma membrane 36.68 15.4
TraesCS1B01G269900.1 Wheat plasma membrane 35.52 15.21
TraesCS4B01G086300.1 Wheat plasma membrane 35.52 15.18
PGSC0003DMT400071183 Potato plasma membrane 35.91 15.17
KRH41999 Soybean cytosol, golgi, plasma membrane 35.91 15.12
TraesCS1A01G259600.1 Wheat plasma membrane 35.14 15.04
EES19530 Sorghum plasma membrane 35.14 15.02
TraesCS4D01G084000.1 Wheat plasma membrane 35.14 15.02
HORVU4Hr1G014760.3 Barley plasma membrane 35.14 15.02
HORVU1Hr1G064780.1 Barley plasma membrane 34.75 14.9
VIT_00s2085g00010.t01 Wine grape plasma membrane 35.52 14.86
KRH42002 Soybean plasma membrane 35.91 14.74
PGSC0003DMT400070657 Potato peroxisome, plasma membrane, plastid 22.78 14.71
TraesCS4A01G229800.1 Wheat plasma membrane 34.36 14.69
Zm00001d038195_P001 Maize plasma membrane 35.52 14.6
TraesCS1D01G259400.1 Wheat plasma membrane 33.98 14.57
VIT_00s0220g00120.t01 Wine grape plasma membrane 34.75 14.49
Bra025334.1-P Field mustard plasma membrane 33.2 14.48
Bra033046.1-P Field mustard cytosol 32.05 14.46
Solyc06g082920.2.1 Tomato plasma membrane 33.98 14.36
KRH07291 Soybean plasma membrane 33.98 14.33
Bra024650.1-P Field mustard plasma membrane 32.43 14.05
Bra020705.1-P Field mustard plasma membrane 29.73 13.95
Bra016244.1-P Field mustard plasma membrane 31.66 13.76
Solyc07g006480.2.1 Tomato plasma membrane 33.59 13.32
GSMUA_Achr9P08150_001 Banana cytosol, nucleus, plastid 19.3 12.47
Solyc12g096710.1.1 Tomato plasma membrane 35.14 11.28
Os11t0249900-01 Rice plasma membrane 21.24 10.98
PGSC0003DMT400070666 Potato plastid 14.67 8.15
GSMUA_Achr2P05730_001 Banana cytosol, peroxisome, plasma membrane 11.97 7.42
Bra037490.1-P Field mustard plastid 12.36 6.84
KRH66274 Soybean plasma membrane 8.49 4.88
KRH66277 Soybean plasma membrane 8.49 4.88
GSMUA_Achr6P28640_001 Banana plastid 1.93 2.13
KRH42000 Soybean vacuole 2.7 1.81
KRH66275 Soybean mitochondrion, plasma membrane 1.54 1.61
KRG88547 Soybean cytosol 1.54 1.23
KRH37646 Soybean cytosol 1.16 1.23
Bra038824.1-P Field mustard cytosol 1.54 1.21
Os01t0891300-01 Rice plasma membrane, plastid 0.77 0.56
PGSC0003DMT400070694 Potato cytosol 0.39 0.47
KRH49900 Soybean cytosol 0.39 0.39
KRH21660 Soybean cytosol 0.0 0.0
KRH21659 Soybean cytosol 0.0 0.0
Solyc12g096720.1.1 Tomato cytosol 0.0 0.0
Protein Annotations
Gene3D:3.80.10.10MapMan:35.1EnsemblPlantsGene:Bra001255EnsemblPlants:Bra001255.1EnsemblPlants:Bra001255.1-PGO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:IPR001611
InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptUniProt:M4CAM6PFAM:PF08263
PFAM:PF13855PANTHER:PTHR44101SUPFAM:SSF52058SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00025404C7
SEG:seg:::::
Description
AT5G48380 (E=3e-049) | leucine-rich repeat family protein / protein kinase family protein
Coordinates
chrA03:-:15540763..15541542
Molecular Weight (calculated)
28433.2 Da
IEP (calculated)
5.619
GRAVY (calculated)
0.110
Length
259 amino acids
Sequence
(BLAST)
001: MMMVAKLVCT IFIRSCLWLL LLPGLTRAME SDITCLRSLK SQLKDPHAYL SNWVFGDYSD GYICSFFGMY CYRSSLNKVL SINLGGSGLE GEFPSGVKLC
101: SFMESLNLTG NNLTGTLPSD TFSSLPFLVT LDLSNNNLAG EIPASLPNMS YLNTLLLDHN RFTGRIPSEL ASSPGLLQFS VAHNDLKGPI PEFTAGNISL
201: SSFDDNPDLC GFPLDPCQDS FYSMAIIAAN IAAAAFFPVG ACYGWLYDSH KQNQRPRRR
Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)
001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR
Arabidopsis Description
BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.