Factsheet for Bra006366.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 3
extracellular 1
golgi 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003911.1-P
Bra016112.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	Bra003911.1-P	AT1G71830.1	19616764
AT5G48380.1	Bra016112.1-P	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70708	Canola	extracellular, plasma membrane, vacuole	73.85	67.04
TraesCS3D01G395600.1	Wheat	endoplasmic reticulum, vacuole	32.0	47.71
TraesCS3A01G401300.1	Wheat	cytosol	34.15	46.25
KXG33866	Sorghum	cytosol	33.54	44.31
TraesCS3D01G395900.1	Wheat	extracellular, golgi, plasma membrane	34.46	44.27
TraesCS3D01G395700.1	Wheat	plasma membrane	35.38	42.75
Os01t0892300-01	Rice	extracellular, golgi, plasma membrane	36.31	42.29
TraesCS3D01G396100.1	Wheat	plasma membrane	33.54	40.98
TraesCS3B01G434200.1	Wheat	plasma membrane	34.15	40.66
TraesCS3A01G400800.1	Wheat	extracellular	33.23	40.6
TraesCS3A01G401200.1	Wheat	plasma membrane	33.54	40.37
TraesCS3B01G434100.1	Wheat	plasma membrane	33.23	40.0
Bra001255.1-P	Field mustard	plasma membrane	31.69	39.77
TraesCS3A01G400700.1	Wheat	extracellular, plasma membrane	32.62	39.7
TraesCS7A01G410600.1	Wheat	extracellular	31.69	39.31
TraesCS3D01G395400.1	Wheat	extracellular, golgi, plasma membrane	29.54	39.18
Bra040380.1-P	Field mustard	extracellular	28.31	39.15
KRH66279	Soybean	cytosol	21.85	38.8
TraesCS3D01G395100.1	Wheat	extracellular, plasma membrane	30.77	38.31
TraesCS3B01G433700.1	Wheat	plasma membrane	31.08	38.26
TraesCS3B01G434000.1	Wheat	plasma membrane	30.15	37.55
TraesCS3A01G401000.1	Wheat	cytosol	19.69	37.21
Os01t0891601-01	Rice	extracellular, golgi, plasma membrane	29.23	36.82
TraesCS3B01G433800.1	Wheat	extracellular	24.62	35.56
HORVU3Hr1G090040.1	Barley	extracellular, plasma membrane	27.08	35.2
Zm00001d039672_P001	Maize	plasma membrane	27.38	34.77
TraesCS3A01G401100.1	Wheat	extracellular, plasma membrane	30.46	34.49
TraesCS3A01G400900.1	Wheat	extracellular, plasma membrane	30.15	34.27
TraesCS3D01G395800.1	Wheat	plastid	35.69	32.68
TraesCS3B01G433900.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	30.77	32.36
Os01t0891700-01	Rice	plasma membrane	27.69	29.41
PGSC0003DMT400070667	Potato	cytosol	19.69	28.96
VIT_05s0094g01290.t01	Wine grape	mitochondrion	10.15	25.78
Bra037831.1-P	Field mustard	extracellular, plasma membrane, vacuole	20.62	24.54
Bra029968.1-P	Field mustard	extracellular	20.31	23.66
AT5G48380.1	Thale cress	plasma membrane	42.77	22.42
Bra020705.1-P	Field mustard	plasma membrane	35.69	21.01
KRH66278	Soybean	cytosol	27.69	19.61
KRH21657	Soybean	cytosol	25.23	19.39
Os05t0414700-01	Rice	plasma membrane	36.0	19.28
HORVU1Hr1G064780.1	Barley	plasma membrane	35.08	18.87
TraesCS1B01G269900.1	Wheat	plasma membrane	35.08	18.84
TraesCS1D01G259400.1	Wheat	plasma membrane	34.77	18.71
TraesCS1A01G259600.1	Wheat	plasma membrane	34.77	18.68
EES19530	Sorghum	plasma membrane	34.15	18.32
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	20.31	17.89
KRH40243	Soybean	plasma membrane	33.23	17.5
VIT_00s2085g00010.t01	Wine grape	plasma membrane	32.92	17.29
VIT_00s0220g00120.t01	Wine grape	plasma membrane	32.92	17.23
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	21.23	17.21
KRH00983	Soybean	nucleus, plasma membrane	32.62	17.15
PGSC0003DMT400075495	Potato	plasma membrane	30.77	17.01
KRH07291	Soybean	plasma membrane	32.0	16.94
PGSC0003DMT400075494	Potato	plasma membrane	30.15	16.84
Zm00001d038195_P001	Maize	plasma membrane	32.62	16.83
Zm00001d007277_P001	Maize	plasma membrane	30.15	16.7
PGSC0003DMT400071183	Potato	plasma membrane	31.38	16.64
Solyc06g082920.2.1	Tomato	plasma membrane	30.77	16.31
EES09539	Sorghum	plasma membrane	29.85	16.06
Bra033046.1-P	Field mustard	cytosol	28.0	15.85
Bra025334.1-P	Field mustard	plasma membrane	28.31	15.49
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	19.08	15.46
Bra024650.1-P	Field mustard	plasma membrane	28.0	15.22
HORVU4Hr1G014760.3	Barley	plasma membrane	28.31	15.18
TraesCS4D01G084000.1	Wheat	plasma membrane	27.69	14.85
TraesCS4B01G086300.1	Wheat	plasma membrane	27.69	14.85
Solyc07g006480.2.1	Tomato	plasma membrane	29.54	14.7
Bra016244.1-P	Field mustard	plasma membrane	26.77	14.6
TraesCS4A01G229800.1	Wheat	plasma membrane	27.08	14.52
KRH42002	Soybean	plasma membrane	27.69	14.26
KRH41999	Soybean	cytosol, golgi, plasma membrane	26.77	14.15
Solyc12g096710.1.1	Tomato	plasma membrane	29.85	12.02
Os11t0249900-01	Rice	plasma membrane	17.85	11.58
Bra037490.1-P	Field mustard	plastid	14.46	10.04
PGSC0003DMT400070666	Potato	plastid	13.85	9.66
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	11.08	8.61
KRH66277	Soybean	plasma membrane	8.92	6.43
KRH66274	Soybean	plasma membrane	8.92	6.43
KRH42000	Soybean	vacuole	4.0	3.37
GSMUA_Achr6P28640_001	Banana	plastid	1.85	2.55
KRH37646	Soybean	cytosol	1.85	2.46
KRH66275	Soybean	mitochondrion, plasma membrane	1.85	2.41
KRG88547	Soybean	cytosol	2.15	2.15
Bra038824.1-P	Field mustard	cytosol	2.15	2.11
Solyc12g096720.1.1	Tomato	cytosol	0.92	2.11
KRH21659	Soybean	cytosol	1.23	1.69
KRH49900	Soybean	cytosol	1.23	1.57
PGSC0003DMT400070694	Potato	cytosol	0.92	1.42
Os01t0891300-01	Rice	plasma membrane, plastid	1.54	1.39
KRH21660	Soybean	cytosol	0.31	0.63

Protein Annotations

EnsemblPlants:Bra006366.1	EnsemblPlants:Bra006366.1-P	EnsemblPlantsGene:Bra006366	Gene3D:3.80.10.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF08263	SUPFAM:SSF52058
TMHMM:TMhelix	UniParc:UPI000253F609	UniProt:M4CQ77	MapMan:35.1	:	:

Description

AT5G48380 (E=1e-076) | leucine-rich repeat family protein / protein kinase family protein

Coordinates

chrA03:-:3196961..3199317

Molecular Weight (calculated)

35772.9 Da

IEP (calculated)

5.584

GRAVY (calculated)

0.005

Length

325 amino acids

Sequence
(BLAST)

001: MLQHNQFTGQ LPPQLASLQR LKQFSVADNH LIGPVPKFNE AYFGSESFAN NTDLCGLPME FCINPEEKVS RFGQMGAAIG AAIFAPVGAF LGWFFFNDAN
101: EANVNCLRNI YSGVKDPNGY LASWVFGNQT AGFICKFTGV TCWHDDENRV LSIKLGGYGL EGEFPLGIKQ CWDLTGLDLS RNNFSGVLPS NIASLIPSVT
201: ILDLSYNKFS GKIPAGLSNI TFLNTLMLQH NQFTGQLPPE LVSMQRLKQF SVAYNHLTGP IPKFNEEHLK IGVDDFANNE GLCGRPMDAC EPDEDMIRFG
301: KMGAAVGAVL FAPLVAYLRL VCHQW

Best Arabidopsis Sequence Match ( AT1G69990.1 )
(BLAST)

001: MKTISIFFVI ILMSSSHAED DVLCLKGFKS SLKDPSNQLN TWSFPNSSSS ICKLTGVSCW NAKENRILSL QLQSMQLSGQ IPESLKLCRS LQSLDLSFND
101: FSGLIPSQIC SWLPYLVTLD LSGNKLSGSI PSQIVDCKFL NSLALNQNKL TGSIPSELTR LNRLQRLSLA DNDLSGSIPS ELSHYGEDGF RGNGGLCGKP
201: LSNCGSFNGK NLTIIVTAGV IGAVGSLCVG FGMFWWFFIR DRRKMNNYGY GAGKCKDDSD WIGLLRSHKL VQVTLFQKPI VKIKLVDLIE ATNGFDSGNI
301: VVSSRSGVSY KADLPDGSTL EVKRLSSCCE LSEKQFRSEI NKLGQIRHPN LVPLLGFCVV EDEILLVYKH MANGTLYSQL QQWDIDWPTR VRVAVGAARG
401: LAWLHHGCQP LYMHQYISSN VILLDEDFDA RVIDYGLGKL VSSQDSKDSS FSNGKFGYVA PEYSSTMVAS LSGDVYGFGI VLLEIVTGQK PVLINNGEEG
501: FKESLVEWVS KHLSNGRSKD AIDRRIFGKG YDDEIMQVLR IACSCVVSRP KERPLMIQVY ESLKNLGDQH GFFSEYSDEF PLIFNKQEHL K

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g69990 [Source:UniProtKB/Swiss-Prot;Acc:C0LGI5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.