Factsheet for TraesCS1D01G259400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G343100.1
TraesCS2B01G340700.1
TraesCS2D01G321400.1
TraesCS6A01G203600.2
TraesCS6B01G223700.3
TraesCS6D01G186900.2
TraesCS7A01G293300.3
TraesCS7B01G182300.1
TraesCS7D01G291200.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	TraesCS2A01G343100.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2B01G340700.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2D01G321400.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS6A01G203600.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS6B01G223700.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS6D01G186900.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS7A01G293300.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS7B01G182300.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS7D01G291200.3	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G259600.1	Wheat	plasma membrane	98.51	98.35
HORVU1Hr1G064780.1	Barley	plasma membrane	93.87	93.87
TraesCS1B01G269900.1	Wheat	plasma membrane	93.54	93.39
Os05t0414700-01	Rice	plasma membrane	83.94	83.53
EES19530	Sorghum	plasma membrane	79.14	78.88
GSMUA_Achr6P28640_001	Banana	plastid	30.63	78.72
Zm00001d038195_P001	Maize	plasma membrane	78.15	74.92
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	47.35	71.32
TraesCS4D01G084000.1	Wheat	plasma membrane	66.39	66.17
Bra038824.1-P	Field mustard	cytosol	35.93	65.56
TraesCS3D01G395900.1	Wheat	extracellular, golgi, plasma membrane	27.15	64.82
TraesCS3D01G395600.1	Wheat	endoplasmic reticulum, vacuole	23.34	64.68
TraesCS3D01G395700.1	Wheat	plasma membrane	28.15	63.2
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	42.22	61.0
TraesCS3D01G396100.1	Wheat	plasma membrane	26.66	60.53
VIT_00s0220g00120.t01	Wine grape	plasma membrane	62.09	60.39
Bra037490.1-P	Field mustard	plastid	46.36	59.83
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	45.86	59.19
Bra020705.1-P	Field mustard	plasma membrane	53.64	58.7
PGSC0003DMT400071183	Potato	plasma membrane	59.27	58.4
VIT_00s2085g00010.t01	Wine grape	plasma membrane	59.6	58.16
Solyc06g082920.2.1	Tomato	plasma membrane	58.77	57.91
CDY48749	Canola	plasma membrane	59.27	57.46
AT5G48380.1	Thale cress	plasma membrane	58.94	57.42
CDY05685	Canola	plasma membrane	58.61	56.64
CDX85334	Canola	plasma membrane	58.11	56.34
TraesCS3D01G395400.1	Wheat	extracellular, golgi, plasma membrane	22.35	55.1
TraesCS3D01G395100.1	Wheat	extracellular, plasma membrane	21.69	50.19
TraesCS3D01G395800.1	Wheat	plastid	27.98	47.61
TraesCS2D01G344700.1	Wheat	vacuole	19.21	44.79
CDX69430	Canola	extracellular	17.05	43.1
TraesCS2D01G344600.1	Wheat	extracellular	15.4	42.66
CDY38095	Canola	plasma membrane	18.21	41.51
CDY16992	Canola	cytosol, plasma membrane, plastid	13.58	40.8
CDY38092	Canola	plasma membrane	18.05	40.67
CDX85492	Canola	plasma membrane	18.05	40.67
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	24.67	40.38
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	26.66	40.15
Solyc12g096720.1.1	Tomato	cytosol	9.27	39.44
PGSC0003DMT400075495	Potato	plasma membrane	37.75	38.78
PGSC0003DMT400075494	Potato	plasma membrane	35.93	37.29
PGSC0003DMT400070694	Potato	cytosol	12.75	36.32
CDY07991	Canola	plasma membrane	15.56	36.29
PGSC0003DMT400070667	Potato	cytosol	12.91	35.29
Bra040380.1-P	Field mustard	extracellular	13.58	34.89
Bra006366.1-P	Field mustard	mitochondrion	18.71	34.77
TraesCS5D01G168900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	16.23	34.15
PGSC0003DMT400070666	Potato	plastid	26.32	34.12
Bra001255.1-P	Field mustard	plasma membrane	14.57	33.98
Solyc07g006480.2.1	Tomato	plasma membrane	36.42	33.69
VIT_05s0094g01290.t01	Wine grape	mitochondrion	6.95	32.81
CDX70708	Canola	extracellular, plasma membrane, vacuole	18.71	31.56
KRH21660	Soybean	cytosol	7.45	28.3
Solyc12g096710.1.1	Tomato	plasma membrane	37.25	27.88

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF07714	PFAM:PF08263	PFAM:PF13516	PFscan:PS50011
PANTHER:PTHR44101	PANTHER:PTHR44101:SF3	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G259400	EnsemblPlants:TraesCS1D01G259400.1	TIGR:cd14066	SEG:seg

Description

No Description!

Coordinates

chr1D:-:352233387..352235299

Molecular Weight (calculated)

66670.3 Da

IEP (calculated)

7.078

GRAVY (calculated)

-0.113

Length

604 amino acids

Sequence
(BLAST)

001: MANHYAPLRV ILVLLLVFTC FASEADIQCL KSVQQSVDPN GVLKSSWNFE NDTAGFTCRF TGVECWHPDE DRVLSLRLGN LGLQGSFPHG LQNCSSMTGL
101: DLSNNNFSGP IPQDISREIP YLTSLDLSYN GFSGTIPPNI SNMTYLNVLN LQHNQFSGEI PPQFSLLTRL TAFNVAENRL SGFIPYSLGK KFTASNFAGN
201: QGLCGVPLDE CQASAKSKNN AAIVGAIVGV VVVIIIVAIV VFVCLRKLPA KKAKKDEDEN KWAKSIKGTK TIKVSMFENP VSKMKLSDLM KATKQFSKEN
301: IIATGRTGTM YRAVLPDGSF LAVKRLQDSQ HSESQFTSEM KTLGQVRNRN LVPLLGFCIA KKEKLLVYKH TPKGSLYDQL HEEGNDCKMD WPLRLRIGIG
401: AAKGLAYLHH TCNPRILHRN ISSKCILLDD DYEPKISDFG LARLMNPLDT HLSTFVNGEF GDIGYVAPEY GSTLVATPKG DVYSFGVVLL ELITGERPTQ
501: VSTAPDNFRG NLVEWITYLS NNSILQDSID KSLIGKDNDS ELMQFLKVAC SCTVTTAKER PTMFEVYQLL RAIGEKYHFS AGDDMMLPPL STDGETPDEL
601: IVAM

Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)

001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR

Arabidopsis Description

BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.