Factsheet for VIT_00s0220g00120.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 9
endoplasmic reticulum 5
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_18s0164g00070.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	VIT_18s0164g00070.t01	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P28640_001	Banana	plastid	28.5	75.32
VIT_00s2085g00010.t01	Wine grape	plasma membrane	71.18	71.41
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	45.57	70.57
Bra038824.1-P	Field mustard	cytosol	36.72	68.88
EES09539	Sorghum	plasma membrane	62.0	63.74
TraesCS4A01G229800.1	Wheat	plasma membrane	61.35	62.87
HORVU4Hr1G014760.3	Barley	plasma membrane	61.35	62.87
EES19530	Sorghum	plasma membrane	61.35	62.87
Zm00001d007277_P001	Maize	plasma membrane	59.42	62.86
TraesCS4B01G086300.1	Wheat	plasma membrane	61.19	62.71
Bra037490.1-P	Field mustard	plastid	47.02	62.39
TraesCS4D01G084000.1	Wheat	plasma membrane	60.87	62.38
HORVU1Hr1G064780.1	Barley	plasma membrane	60.55	62.25
TraesCS1D01G259400.1	Wheat	plasma membrane	60.39	62.09
TraesCS1A01G259600.1	Wheat	plasma membrane	60.39	61.98
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	46.54	61.75
TraesCS1B01G269900.1	Wheat	plasma membrane	59.58	61.16
Bra020705.1-P	Field mustard	plasma membrane	54.27	61.05
AT5G48380.1	Thale cress	plasma membrane	60.06	60.16
Zm00001d038195_P001	Maize	plasma membrane	61.03	60.16
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	40.42	60.05
CDY48749	Canola	plasma membrane	60.23	60.03
CDX85334	Canola	plasma membrane	59.9	59.71
CDY05685	Canola	plasma membrane	59.9	59.52
Zm00001d039672_P001	Maize	plasma membrane	21.09	51.17
TraesCS3A01G401300.1	Wheat	cytosol	18.2	47.08
TraesCS3D01G395600.1	Wheat	endoplasmic reticulum, vacuole	16.43	46.79
TraesCS3D01G395900.1	Wheat	extracellular, golgi, plasma membrane	19.0	46.64
VIT_14s0066g02250.t01	Wine grape	plasma membrane	43.96	44.54
VIT_01s0026g01060.t01	Wine grape	plasma membrane	43.32	44.03
CDX69430	Canola	extracellular	16.91	43.93
VIT_05s0094g01270.t01	Wine grape	cytosol	23.67	43.75
TraesCS3A01G400800.1	Wheat	extracellular	18.68	43.61
TraesCS3D01G396100.1	Wheat	plasma membrane	18.52	43.23
TraesCS3A01G401200.1	Wheat	plasma membrane	18.68	42.96
KXG33866	Sorghum	cytosol	16.91	42.68
CDY38095	Canola	plasma membrane	18.2	42.64
TraesCS3B01G434100.1	Wheat	plasma membrane	18.52	42.59
TraesCS3B01G434000.1	Wheat	plasma membrane	17.87	42.53
CDY16992	Canola	cytosol, plasma membrane, plastid	13.69	42.29
TraesCS3D01G395400.1	Wheat	extracellular, golgi, plasma membrane	16.59	42.04
TraesCS3A01G400700.1	Wheat	extracellular, plasma membrane	18.04	41.95
CDX85492	Canola	plasma membrane	18.04	41.79
CDY38092	Canola	plasma membrane	18.04	41.79
TraesCS3B01G434200.1	Wheat	plasma membrane	18.36	41.76
TraesCS3D01G395700.1	Wheat	plasma membrane	18.04	41.64
TraesCS3B01G433700.1	Wheat	plasma membrane	17.39	40.91
TraesCS7A01G410600.1	Wheat	extracellular	16.91	40.08
TraesCS3D01G395100.1	Wheat	extracellular, plasma membrane	16.75	39.85
HORVU3Hr1G090040.1	Barley	extracellular, plasma membrane	15.3	38.0
VIT_05s0094g01290.t01	Wine grape	mitochondrion	7.73	37.5
TraesCS3A01G401000.1	Wheat	cytosol	10.31	37.21
TraesCS3A01G401100.1	Wheat	extracellular, plasma membrane	17.07	36.93
Bra040380.1-P	Field mustard	extracellular	13.53	35.74
TraesCS3B01G433800.1	Wheat	extracellular	12.88	35.56
CDY07991	Canola	plasma membrane	14.65	35.14
Bra001255.1-P	Field mustard	plasma membrane	14.49	34.75
TraesCS3A01G400900.1	Wheat	extracellular, plasma membrane	15.62	33.92
TraesCS3B01G433900.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	16.43	33.01
Bra006366.1-P	Field mustard	mitochondrion	17.23	32.92
TraesCS3D01G395800.1	Wheat	plastid	18.68	32.68
VIT_07s0151g00470.t01	Wine grape	plasma membrane	14.01	32.22
CDX70708	Canola	extracellular, plasma membrane, vacuole	17.87	31.01
VIT_16s0039g01990.t01	Wine grape	cytosol	12.88	24.84

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100251471	wikigene:100251471	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CCB48301	ProteinID:CCB48301.1	UniProt:F6H7V9	EMBL:FN595254	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100251471	wikigene:LOC100251471	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF07714	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR44101	PANTHER:PTHR44101:SF5	InterPro:Prot_kinase_dom
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TIGR:TC52982	TIGR:TC55362
TMHMM:TMhelix	UniParc:UPI0002109837	ArrayExpress:VIT_00s0220g00120	EnsemblPlantsGene:VIT_00s0220g00120	EnsemblPlants:VIT_00s0220g00120.t01	unigene:Vvi.23816
RefSeq:XP_002267164	RefSeq:XP_002267164.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrUn:-:14254040..14257139

Molecular Weight (calculated)

69075.6 Da

IEP (calculated)

8.407

GRAVY (calculated)

-0.131

Length

621 amino acids

Sequence
(BLAST)

001: MALTSKYLVV VAHSLIWVVL LSYSSVCYAT ETDIYCLKTI KNSLQDPNNY LNFSWNFNNN TEGFICKFAG IDCWHPDENR VLNIRLSDMG LKGQFPRGIR
101: NCSSLTGLDL SNNKLSGSIP SDISELLKFV TTLELSSNSF AGDIPPSLAN CSFLNVLKLD NNRLTGTIPL QLSQLNRLKT FSVANNLLTG QIPNINSTTR
201: EDYANNPGLC GKPFFDLCQA SPKKFRIGII AGAAVGGVTI TVIVVVIILY YISRGVVIKK KKKEDDPDGN KWTKSIKGLK GLKVSMFEKS ISKMRLSDLM
301: KATNNFNKNN IIGDGRTGSV YKAVLPDGCS LMVKRLQDSQ RSEKEFVSEM NTLGTVKHRN LVPLMGFCMA KKERLLVYKH MANGNLYDQL HPLEPEAKGM
401: EWPLRLRIAI GTAKGLAWLH HSCNPRIIHR NISSKCILLD ENFEPKLSDF GLARLMNPVD THLSTFVNGE FGDLGYVAPE YLRTLVATPK GDVYSFGTVL
501: LELITGERPT HVSNAPDGFK GSLVEWITDL SSNSLLQTAI DKSLLGKGFD GELMQFLRVA CKCVSETPKE RPTMFEVYQL LRAIGERYHF TTDDEIFVPS
601: NTADADLPDE LIVARETKEV P

Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)

001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR

Arabidopsis Description

BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.