Factsheet for VIT_01s0026g01060.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G27190.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT1G27190.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT1G27190.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT1G27190.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0066g02250.t01	Wine grape	plasma membrane	66.78	66.56
Bra024650.1-P	Field mustard	plasma membrane	65.14	66.56
CDY16228	Canola	plasma membrane	65.14	66.44
AT1G27190.1	Thale cress	plasma membrane	65.3	66.39
CDY14686	Canola	plasma membrane	64.48	66.0
PGSC0003DMT400058291	Potato	plasma membrane	64.98	64.55
AT1G69990.1	Thale cress	plasma membrane	61.87	63.96
Solyc05g006570.1.1	Tomato	plasma membrane	63.5	63.61
CDY38780	Canola	plasma membrane	61.05	62.17
Bra016244.1-P	Field mustard	plasma membrane	60.56	62.08
CDY11627	Canola	plasma membrane	59.41	61.01
Zm00001d016331_P001	Maize	vacuole	17.35	47.32
VIT_00s0220g00120.t01	Wine grape	plasma membrane	44.03	43.32
VIT_00s2085g00010.t01	Wine grape	plasma membrane	42.72	42.16
VIT_05s0094g01270.t01	Wine grape	cytosol	20.62	37.5
Zm00001d021202_P030	Maize	plastid	26.19	35.09
VIT_07s0151g00470.t01	Wine grape	plasma membrane	14.89	33.7
Zm00001d006033_P032	Maize	plastid	32.9	32.01
VIT_05s0094g01290.t01	Wine grape	mitochondrion	6.38	30.47
VIT_16s0039g01990.t01	Wine grape	cytosol	10.31	19.57

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100262086	wikigene:100262086	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CCB56615	ProteinID:CCB56615.1	UniProt:F6HPI7	EMBL:FN596002	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100262086	wikigene:LOC100262086	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF07714	PFAM:PF08263
PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF4	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001982A85	ArrayExpress:VIT_01s0026g01060	EnsemblPlantsGene:VIT_01s0026g01060
EnsemblPlants:VIT_01s0026g01060.t01	unigene:Vvi.17543	RefSeq:XP_002268171	RefSeq:XP_002268171.1	SEG:seg	:

Description

No Description!

Coordinates

chr1:+:10044361..10046545

Molecular Weight (calculated)

67558.2 Da

IEP (calculated)

6.859

GRAVY (calculated)

-0.042

Length

611 amino acids

Sequence
(BLAST)

001: MNLTSSLAVL HLFFFFFFFS SFFAVAVAIE DDVVCLQGLK DSLTDPDDKI STWRFTNTSA SFICNLVGVS CWNAQESRII SLQLPDMNLI GTLPDSLQHC
101: RSLQSLGLSG NRISGSIPDQ ICTWLPYVVT LDLSHNDLTG PIPPEMVNCK FLNNLILNNN GLSGMIPYEI GRLPRLKKFS VANNDLSGSI PSELSKFEDD
201: AFDGNNGLCR KPLGKCGGLS SKSLAIIIAA GIFGAAGSLL LGFALWWWFF VRLNRKKRGY SGGDSGKIGG SWAERLRMHK LVQVSLFQKP IVKIKLADLM
301: AATNNFDPEY LLCSTRTGVS YKAVLLDGSA LAIKRLSACK LSDKQFRSEM NRLGQLRHPN LVPLLGFCAV EEEKLLVYKH MPNGTLYSLL HGSTSFHSQH
401: HSIDWPTRLR IGVGAARGLA WLHHGCQPPY MHQNISSSVI LLDDDYDARI TDFGLARLVA SADSNDSSFV NGDLGEFGYV APEYSSTMVP SLKGDVYGFG
501: VVLLELVTGQ KPLEVNNGDE GFKGNLVDWV IQLLISGRSK DAIDKDLWGK GYDDEIVQLM RVACSCVGSR PKERPSMYNV YQSLKSMAEK HGFSEQYDEF
601: PLMFSKQDPD Y

Best Arabidopsis Sequence Match ( AT1G27190.1 )
(BLAST)

001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A

Arabidopsis Description

Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.