Factsheet for VIT_05s0094g01270.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0039g01990.t01	Wine grape	cytosol	54.46	56.83
Zm00001d016331_P001	Maize	vacuole	17.86	26.79
VIT_00s2085g00010.t01	Wine grape	plasma membrane	43.75	23.75
VIT_00s0220g00120.t01	Wine grape	plasma membrane	43.75	23.67
Zm00001d021202_P030	Maize	plastid	28.87	21.27
VIT_01s0026g01060.t01	Wine grape	plasma membrane	37.5	20.62
VIT_14s0066g02250.t01	Wine grape	plasma membrane	35.71	19.58
Zm00001d006033_P032	Maize	plastid	28.57	15.29
VIT_05s0094g01290.t01	Wine grape	mitochondrion	3.87	10.16
VIT_07s0151g00470.t01	Wine grape	plasma membrane	4.76	5.93
Solyc11g016930.1.1	Tomato	extracellular, nucleus, plasma membrane	1.79	3.05
PGSC0003DMT400085762	Potato	extracellular	1.79	2.86
Solyc11g015910.1.1	Tomato	extracellular	0.89	2.14

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100249031	wikigene:100249031	Gene3D:3.30.200.20	MapMan:50.2.7	EMBL:AM465903
ProteinID:CAN68144	ProteinID:CAN68144.1	ProteinID:CCB49422	ProteinID:CCB49422.1	UniProt:F6HB35	EMBL:FN595507
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100249031	wikigene:LOC100249031
PFAM:PF00069	PIRSF:PIRSF000654	PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF1	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	UniParc:UPI0002109873	ArrayExpress:VIT_05s0094g01270	EnsemblPlantsGene:VIT_05s0094g01270	EnsemblPlants:VIT_05s0094g01270.t01	RefSeq:XP_003632103
RefSeq:XP_003632103.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:24541244..24543738

Molecular Weight (calculated)

37901.7 Da

IEP (calculated)

7.567

GRAVY (calculated)

-0.235

Length

336 amino acids

Sequence
(BLAST)

001: MRGVYKTLRA AGERHSQLTE NIIGFGKTGT MYKAAVMNGC LPAVKRFLDS QQFEKQFIYE ILILGRLTHP NLVPLLGFCI ERNEKLLVYE HMGNGNLYQW
101: LHPNKAKAKI LEWPLRGRIG VGLARGLAWL HHNCMFLVGH GNINSKCILL DQNFEPQISN FGGATLMKSS ITDSTWGLFV GSADTENKRV QCPLKKDVYS
201: FGIVLLEMVT RKKPHKISDA SRRFDGTLVD WINHLLSTSG LYDAIDKSLI GQGFDGEIFE FLKVACSCVK ASPHRRPTML EVDKILRNTV GRHQIDDDSE
301: SWTQNECGTS NDRDEYTAVE IMEESIEIVQ VDIAHS

Best Arabidopsis Sequence Match ( AT1G27190.1 )
(BLAST)

001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A

Arabidopsis Description

Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.