Factsheet for Zm00001d021202_P030

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d033980_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G27190.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT1G27190.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT1G27190.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT1G27190.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT1G27190.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT1G27190.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT1G27190.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT1G27190.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT1G27190.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT1G27190.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT1G27190.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT1G27190.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT1G27190.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT1G27190.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT1G27190.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT1G27190.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT1G27190.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT1G27190.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT1G27190.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT1G27190.1	Zm00001d052415_P001	AT5G21274.1	17360592
AT3G28450.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT3G28450.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT3G28450.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT3G28450.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT3G28450.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT3G28450.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT3G28450.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT3G28450.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT3G28450.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT3G28450.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT3G28450.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT3G28450.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT3G28450.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT3G28450.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT3G28450.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT3G28450.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT3G28450.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT3G28450.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT3G28450.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT3G28450.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT3G28450.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT3G28450.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT3G28450.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT3G28450.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT3G28450.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT3G28450.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT3G28450.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT3G28450.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT3G28450.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT3G28450.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT3G28450.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016331_P001	Maize	vacuole	47.59	96.88
Zm00001d006033_P032	Maize	plastid	89.47	64.97
Zm00001d003245_P001	Maize	mitochondrion	60.31	43.93
Zm00001d025726_P001	Maize	plasma membrane	55.92	40.35
CDX85198	Canola	golgi, plasma membrane	32.46	38.95
VIT_05s0094g01270.t01	Wine grape	cytosol	21.27	28.87
CDY14686	Canola	plasma membrane	35.31	26.97
Bra024650.1-P	Field mustard	plasma membrane	35.09	26.76
CDY16228	Canola	plasma membrane	35.09	26.71
AT1G27190.1	Thale cress	plasma membrane	34.87	26.46
VIT_01s0026g01060.t01	Wine grape	plasma membrane	35.09	26.19
PGSC0003DMT400017876	Potato	plasma membrane	35.09	26.14
Solyc02g087460.1.1	Tomato	plasma membrane	34.21	25.96
PGSC0003DMT400003278	Potato	plasma membrane	33.99	25.79
Solyc05g006570.1.1	Tomato	plasma membrane	34.21	25.57
Solyc02g067560.1.1	Tomato	golgi, plasma membrane, vacuole	33.77	25.54
Bra033046.1-P	Field mustard	cytosol	31.8	25.26
PGSC0003DMT400058291	Potato	plasma membrane	33.99	25.2
VIT_14s0066g02250.t01	Wine grape	plasma membrane	33.33	24.8
Bra025334.1-P	Field mustard	plasma membrane	32.24	24.75
CDY47244	Canola	plasma membrane	32.24	24.46
CDY04020	Canola	plasma membrane	32.24	24.42
AT1G69990.1	Thale cress	plasma membrane	31.58	24.37
CDY11627	Canola	plasma membrane	31.58	24.2
AT3G28450.1	Thale cress	plasma membrane	31.8	23.97
CDY38780	Canola	plasma membrane	31.36	23.83
Bra016244.1-P	Field mustard	plasma membrane	30.92	23.66
CDX86433	Canola	plasma membrane	27.63	22.5
Zm00001d038195_P001	Maize	plasma membrane	30.7	22.22
Zm00001d007277_P001	Maize	plasma membrane	28.29	21.98
VIT_16s0039g01990.t01	Wine grape	cytosol	12.28	17.39
KRG93454	Soybean	mitochondrion	10.31	11.9
Zm00001d052058_P001	Maize	extracellular, plasma membrane	3.07	5.0
Zm00001d018344_P001	Maize	extracellular, plasma membrane	3.07	4.96
CDX85197	Canola	plastid	0.44	0.9
Zm00001d039672_P001	Maize	plasma membrane	0.22	0.39
Solyc11g016930.1.1	Tomato	extracellular, nucleus, plasma membrane	0.0	0.0
Solyc11g015910.1.1	Tomato	extracellular	0.0	0.0
KRH18545	Soybean	plasma membrane	0.0	0.0
KRH18546	Soybean	extracellular	0.0	0.0
PGSC0003DMT400085762	Potato	extracellular	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	UniProt:A0A1D6I912	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0006952
GO:GO:0008150	GO:GO:0008152	GO:GO:0009607	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
InterPro:Mlo	ProteinID:ONM56523.1	PFAM:PF03094	PFAM:PF07714	PIRSF:PIRSF000654	PFscan:PS50011
PANTHER:PTHR44101	PANTHER:PTHR44101:SF2	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix
UniParc:UPI000843EAE5	EnsemblPlantsGene:Zm00001d021202	EnsemblPlants:Zm00001d021202_P030	EnsemblPlants:Zm00001d021202_T030	SEG:seg	:

Description

Inactive LRR receptor-like serine/threonine-protein kinase BIR2

Coordinates

chr7:-:145873086..145877698

Molecular Weight (calculated)

50508.1 Da

IEP (calculated)

6.454

GRAVY (calculated)

0.076

Length

456 amino acids

Sequence
(BLAST)

001: MAATHDFSTS HIVVAGSSRA GTAYRAVLRD GSALTVKRLH SCPLSEKAFR AEMGRMGQLR HPNIVPLLGF CVVEDERLLV YKHMESGALS SVMKKPGEAP
101: LDWATRLRTP VGAARGLAWL HHWFQVPQIH QNLSSSAVLL DEDYDARITD VGLTRLVRMA PGEGGDTSPF LNGDFGEFGY VAPEYASNPV GTMKGDAYAF
201: GVILFELVSG QEAAAVVTDV TGEGFKGTLV DWVNQLKASG RISDAIDKPL RGKGHEAEIQ EFLKIAFACT QPQVILLENV ELTLEAFDYM QLPFTLKDVQ
301: REMKNVEKDI RVATKRNDML SAKKPCLHAE LMLLGVISLL LSQTTLFISE ICVPSSLFTS RFYICSESDY QDLLRNTDAN QTALDKNMFG GQRLHVCGEG
401: HEPFVSYEGL EQLHRFLFIL GITHVLYNFV TVVLSMIKVR AHCLIAALTF FPLIFF

Best Arabidopsis Sequence Match ( AT1G27190.1 )
(BLAST)

001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A

Arabidopsis Description

Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.