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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, nucleus

Predictor Summary:
  • nucleus 2
  • extracellular 2
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400085762 Potato extracellular 75.13 70.48
Solyc11g015910.1.1 Tomato extracellular 48.22 67.86
Solyc02g092040.1.1 Tomato extracellular 30.96 22.85
Solyc02g067560.1.1 Tomato golgi, plasma membrane, vacuole 51.27 16.75
Solyc02g087460.1.1 Tomato plasma membrane 49.75 16.31
Solyc05g006570.1.1 Tomato plasma membrane 44.16 14.26
Solyc06g082920.2.1 Tomato plasma membrane 38.07 12.23
Solyc07g006480.2.1 Tomato plasma membrane 36.04 10.87
Solyc12g096710.1.1 Tomato plasma membrane 36.04 8.8
VIT_05s0094g01270.t01 Wine grape cytosol 3.05 1.79
Zm00001d006033_P032 Maize plastid 0.51 0.16
Solyc12g096720.1.1 Tomato cytosol 0.0 0.0
VIT_16s0039g01990.t01 Wine grape cytosol 0.0 0.0
Zm00001d016331_P001 Maize vacuole 0.0 0.0
Zm00001d021202_P030 Maize plastid 0.0 0.0
Protein Annotations
EnsemblPlants:Solyc11g016930.1.1EnsemblPlantsGene:Solyc11g016930.1Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPANTHER:PTHR44101
PANTHER:PTHR44101:SF4PFAM:PF08263PFscan:PS51450SEG:segSUPFAM:SSF52058UniParc:UPI000276A74B
UniProt:K4D6J9MapMan:35.1::::
Description
No Description!
Coordinates
chr11:+:7595180..7599225
Molecular Weight (calculated)
21996.5 Da
IEP (calculated)
8.350
GRAVY (calculated)
-0.052
Length
197 amino acids
Sequence
(BLAST)
001: MWACIKFFIS QEFRSRSCEC LLDYCQRLLL HNVTASNDIK CLQGLKDSFK DPNVNFNSWN FSNYSMGFIC KFVGVIYWNN LENRMISLSL PNMNLSVQLP
101: DAFKCCSSLA TLHLSGNSFS GSIPAELRNC TYLNKLILNN NKLSGNIPPE ISQLTRLKVL SLANNNLSGN IPPFSGLTDF EYGGNRHLCG GTLAKCG
Best Arabidopsis Sequence Match ( AT1G69990.1 )
(BLAST)
001: MKTISIFFVI ILMSSSHAED DVLCLKGFKS SLKDPSNQLN TWSFPNSSSS ICKLTGVSCW NAKENRILSL QLQSMQLSGQ IPESLKLCRS LQSLDLSFND
101: FSGLIPSQIC SWLPYLVTLD LSGNKLSGSI PSQIVDCKFL NSLALNQNKL TGSIPSELTR LNRLQRLSLA DNDLSGSIPS ELSHYGEDGF RGNGGLCGKP
201: LSNCGSFNGK NLTIIVTAGV IGAVGSLCVG FGMFWWFFIR DRRKMNNYGY GAGKCKDDSD WIGLLRSHKL VQVTLFQKPI VKIKLVDLIE ATNGFDSGNI
301: VVSSRSGVSY KADLPDGSTL EVKRLSSCCE LSEKQFRSEI NKLGQIRHPN LVPLLGFCVV EDEILLVYKH MANGTLYSQL QQWDIDWPTR VRVAVGAARG
401: LAWLHHGCQP LYMHQYISSN VILLDEDFDA RVIDYGLGKL VSSQDSKDSS FSNGKFGYVA PEYSSTMVAS LSGDVYGFGI VLLEIVTGQK PVLINNGEEG
501: FKESLVEWVS KHLSNGRSKD AIDRRIFGKG YDDEIMQVLR IACSCVVSRP KERPLMIQVY ESLKNLGDQH GFFSEYSDEF PLIFNKQEHL K
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g69990 [Source:UniProtKB/Swiss-Prot;Acc:C0LGI5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.