Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- extracellular 6
- endoplasmic reticulum 3
- vacuole 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400093490 | Potato | extracellular | 98.13 | 98.13 |
| VIT_07s0151g00470.t01 | Wine grape | plasma membrane | 79.4 | 78.52 |
| KRH28321 | Soybean | extracellular, plasma membrane | 73.03 | 72.49 |
| KRH77166 | Soybean | plasma membrane | 71.91 | 71.64 |
| AT3G49750.1 | Thale cress | extracellular, plasma membrane | 71.16 | 69.34 |
| CDY05959 | Canola | extracellular, plasma membrane | 70.41 | 68.12 |
| Bra029968.1-P | Field mustard | extracellular | 70.79 | 67.74 |
| GSMUA_Achr2P08610_001 | Banana | plasma membrane | 70.79 | 67.5 |
| Bra037831.1-P | Field mustard | extracellular, plasma membrane, vacuole | 68.54 | 67.03 |
| AT5G65830.1 | Thale cress | extracellular, plasma membrane | 69.29 | 66.31 |
| GSMUA_Achr7P27510_001 | Banana | extracellular, plasma membrane | 62.55 | 66.27 |
| TraesCS5B01G161200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 70.41 | 66.2 |
| TraesCS5D01G168900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 70.79 | 65.85 |
| HORVU0Hr1G012140.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 70.79 | 65.85 |
| TraesCS5A01G163900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 70.41 | 65.51 |
| Zm00001d052058_P001 | Maize | extracellular, plasma membrane | 68.54 | 65.36 |
| EES07661 | Sorghum | extracellular, plasma membrane | 69.66 | 65.26 |
| Zm00001d018344_P001 | Maize | extracellular, plasma membrane | 68.91 | 65.25 |
| GSMUA_Achr3P30680_001 | Banana | extracellular, plasma membrane | 69.66 | 64.81 |
| GSMUA_Achr3P25790_001 | Banana | extracellular, plasma membrane, vacuole | 68.16 | 64.77 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 66.29 | 64.36 |
| CDX81298 | Canola | extracellular, plasma membrane | 58.43 | 64.2 |
| Os09t0131200-01 | Rice | plasma membrane | 67.42 | 63.83 |
| CDY18672 | Canola | mitochondrion, plasma membrane | 58.05 | 63.79 |
| GSMUA_Achr1P14260_001 | Banana | plastid | 70.41 | 61.84 |
| Solyc11g016930.1.1 | Tomato | extracellular, nucleus, plasma membrane | 22.85 | 30.96 |
| Solyc11g015910.1.1 | Tomato | extracellular | 15.36 | 29.29 |
| Solyc02g087460.1.1 | Tomato | plasma membrane | 33.71 | 14.97 |
| Solyc02g067560.1.1 | Tomato | golgi, plasma membrane, vacuole | 33.33 | 14.76 |
| Solyc06g082920.2.1 | Tomato | plasma membrane | 33.71 | 14.68 |
| Solyc05g006570.1.1 | Tomato | plasma membrane | 32.58 | 14.26 |
| Solyc07g006480.2.1 | Tomato | plasma membrane | 29.96 | 12.25 |
| Solyc12g096710.1.1 | Tomato | plasma membrane | 30.34 | 10.04 |
| Solyc12g096720.1.1 | Tomato | cytosol | 1.12 | 2.11 |
Protein Annotations
| EnsemblPlants:Solyc02g092040.1.1 | EnsemblPlantsGene:Solyc02g092040.1 | Gene3D:3.80.10.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR44839 | PRINTS:PR00019 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF52058 | TMHMM:TMhelix | UniParc:UPI0002767D59 | UniProt:K4BD01 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2:-:53249912..53250715
Molecular Weight (calculated)
28897.9 Da
IEP (calculated)
6.236
GRAVY (calculated)
0.154
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIWSNLVVL LVIFPFCTSD PNDEMCLTHL SQSLQDPLKN LQNWTKSSFA KPCDGFTSYL QGATCNNGRI YKLSLSNLSL KGTISPYLSN CTNLQALDLS
101: SNAISGPIPL ELQFLVNLAV LNLSANQLSG PIPEQLAICA YLNVIDLHDN QLNGLIPQQL GLLVRLSVFD VSNNRLSGPI PASLGNRSGN LPRFNASSFD
201: GNKDLYGYPL PPKKSNGLSV LAIVGIGLGS GFLSLVLSFT AVCIWLRVTE QKLDAEEGKI SHLMPDY
101: SNAISGPIPL ELQFLVNLAV LNLSANQLSG PIPEQLAICA YLNVIDLHDN QLNGLIPQQL GLLVRLSVFD VSNNRLSGPI PASLGNRSGN LPRFNASSFD
201: GNKDLYGYPL PPKKSNGLSV LAIVGIGLGS GFLSLVLSFT AVCIWLRVTE QKLDAEEGKI SHLMPDY
001: MTRSHRLLLL LLLIFQTAQR LTTADPNDEA CLKNLRQNLE DPASNLRNWT NSVFSNPCSG FTSYLPGATC NNGRIYKLSL TNLSLRGSIS PFLSNCTNLQ
101: SLDLSSNQIS GVIPPEIQYL VNLAVLNLSS NHLSGEITPQ LALCAYLNVI DLHDNELSGQ IPQQLGLLAR LSAFDVSNNK LSGQIPTYLS NRTGNFPRFN
201: ASSFIGNKGL YGYPLQEMMM KSKGLSVMAI VGIGLGSGIA SLMISFTGVC LWLRITEKKI VEEEGKISQS MPDY
101: SLDLSSNQIS GVIPPEIQYL VNLAVLNLSS NHLSGEITPQ LALCAYLNVI DLHDNELSGQ IPQQLGLLAR LSAFDVSNNK LSGQIPTYLS NRTGNFPRFN
201: ASSFIGNKGL YGYPLQEMMM KSKGLSVMAI VGIGLGSGIA SLMISFTGVC LWLRITEKKI VEEEGKISQS MPDY
Arabidopsis Description
AtRLP44RLP44 [Source:UniProtKB/TrEMBL;Acc:A0A178VI92]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.