Factsheet for PGSC0003DMT400093490

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 4
plasma membrane 6
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g092040.1.1	Tomato	extracellular	98.13	98.13
VIT_07s0151g00470.t01	Wine grape	plasma membrane	78.28	77.41
KRH28321	Soybean	extracellular, plasma membrane	71.91	71.38
KRH77166	Soybean	plasma membrane	70.79	70.52
AT3G49750.1	Thale cress	extracellular, plasma membrane	71.91	70.07
CDY05959	Canola	extracellular, plasma membrane	71.16	68.84
Bra029968.1-P	Field mustard	extracellular	71.91	68.82
Bra037831.1-P	Field mustard	extracellular, plasma membrane, vacuole	68.91	67.4
GSMUA_Achr2P08610_001	Banana	plasma membrane	70.41	67.14
AT5G65830.1	Thale cress	extracellular, plasma membrane	68.91	65.95
TraesCS5B01G161200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	70.04	65.85
TraesCS5D01G168900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	70.41	65.51
HORVU0Hr1G012140.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	70.41	65.51
GSMUA_Achr7P27510_001	Banana	extracellular, plasma membrane	61.8	65.48
Zm00001d052058_P001	Maize	extracellular, plasma membrane	68.54	65.36
Zm00001d018344_P001	Maize	extracellular, plasma membrane	68.91	65.25
TraesCS5A01G163900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	70.04	65.16
EES07661	Sorghum	extracellular, plasma membrane	69.29	64.91
CDX81298	Canola	extracellular, plasma membrane	58.8	64.61
CDY18672	Canola	mitochondrion, plasma membrane	58.43	64.2
GSMUA_Achr3P30680_001	Banana	extracellular, plasma membrane	68.91	64.11
GSMUA_Achr3P25790_001	Banana	extracellular, plasma membrane, vacuole	67.42	64.06
Os09t0131200-01	Rice	plasma membrane	67.04	63.48
GSMUA_AchrUn_...	Banana	plasma membrane	65.17	63.27
GSMUA_Achr1P14260_001	Banana	plastid	69.66	61.18
PGSC0003DMT400085762	Potato	extracellular	28.09	35.71
PGSC0003DMT400070667	Potato	cytosol	20.97	25.34
PGSC0003DMT400071183	Potato	plasma membrane	34.46	15.01
PGSC0003DMT400003278	Potato	plasma membrane	33.71	14.97
PGSC0003DMT400017876	Potato	plasma membrane	33.71	14.71
PGSC0003DMT400058291	Potato	plasma membrane	33.71	14.63
PGSC0003DMT400075494	Potato	plasma membrane	31.09	14.26
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	20.6	13.72
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	18.73	13.55
PGSC0003DMT400075495	Potato	plasma membrane	29.59	13.44
PGSC0003DMT400070666	Potato	plastid	16.1	9.23
PGSC0003DMT400070694	Potato	cytosol	2.25	2.83

Protein Annotations

EntrezGene:102584709	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR032675	InterPro:LRR_dom_sf	UniProt:M1DS24	EnsemblPlantsGene:PGSC0003DMG400043061	PGSC:PGSC0003DMG400043061	EnsemblPlants:PGSC0003DMT400093490
PRINTS:PR00019	PANTHER:PTHR44839	SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002966B41
RefSeq:XP_006363800.1	SEG:seg	:	:	:	:

Description

Serine-threonine protein kinase, plant-type [Source:PGSC_GENE;Acc:PGSC0003DMG400043061]

Coordinates

chr2:-:42474038..42474841

Molecular Weight (calculated)

28970.1 Da

IEP (calculated)

6.236

GRAVY (calculated)

0.149

Length

267 amino acids

Sequence
(BLAST)

001: MGIWSNLLVL LVIFPFCTPD PNDEMCLTHL SQSLQDPLKN LQNWTKTSFA KPCDGFTSYL QGATCNNGRI YKLSLSNLSL KGTISPYLSN CTNLQALDLS
101: SNAISGPIPL ELQFLVNLAV LNLSANQLSG PIPEQLAICA YLNVIDLHDN QLNGLIPQQL GLLVRLSVFD VSNNRLSGPI PASLGNRSGN FPRFNASSFD
201: GNKDLYGYPL PPKKSNGLSV LAIVGIGLGS GFLSLVISFT AVCIWLRVTE QKLDAEEGKI SHLMPDY

Best Arabidopsis Sequence Match ( AT3G49750.1 )
(BLAST)

001: MTRSHRLLLL LLLIFQTAQR LTTADPNDEA CLKNLRQNLE DPASNLRNWT NSVFSNPCSG FTSYLPGATC NNGRIYKLSL TNLSLRGSIS PFLSNCTNLQ
101: SLDLSSNQIS GVIPPEIQYL VNLAVLNLSS NHLSGEITPQ LALCAYLNVI DLHDNELSGQ IPQQLGLLAR LSAFDVSNNK LSGQIPTYLS NRTGNFPRFN
201: ASSFIGNKGL YGYPLQEMMM KSKGLSVMAI VGIGLGSGIA SLMISFTGVC LWLRITEKKI VEEEGKISQS MPDY

Arabidopsis Description

AtRLP44RLP44 [Source:UniProtKB/TrEMBL;Acc:A0A178VI92]
SUBAcon: [extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.